Literature DB >> 24631237

Inhibitory GEF phosphorylation provides negative feedback in the yeast polarity circuit.

Chun-Chen Kuo1, Natasha S Savage2, Hsin Chen1, Chi-Fang Wu1, Trevin R Zyla1, Daniel J Lew3.   

Abstract

Cell polarity is critical for the form and function of many cell types. During polarity establishment, cells define a cortical "front" that behaves differently from the rest of the cortex. The front accumulates high levels of the active form of a polarity-determining Rho-family GTPase (Cdc42, Rac, or Rop) that then orients cytoskeletal elements through various effectors to generate the polarized morphology appropriate to the particular cell type [1, 2]. GTPase accumulation is thought to involve positive feedback, such that active GTPase promotes further delivery and/or activation of more GTPase in its vicinity [3]. Recent studies suggest that once a front forms, the concentration of polarity factors at the front can increase and decrease periodically, first clustering the factors at the cortex and then dispersing them back to the cytoplasm [4-7]. Such oscillatory behavior implies the presence of negative feedback in the polarity circuit [8], but the mechanism of negative feedback was not known. Here we show that, in the budding yeast Saccharomyces cerevisiae, the catalytic activity of the Cdc42-directed GEF is inhibited by Cdc42-stimulated effector kinases, thus providing negative feedback. We further show that replacing the GEF with a phosphosite mutant GEF abolishes oscillations and leads to the accumulation of excess GTP-Cdc42 and other polarity factors at the front. These findings reveal a mechanism for negative feedback and suggest that the function of negative feedback via GEF inhibition is to buffer the level of Cdc42 at the polarity site.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 24631237      PMCID: PMC4018745          DOI: 10.1016/j.cub.2014.02.024

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  28 in total

1.  Multisite phosphorylation of a CDK inhibitor sets a threshold for the onset of DNA replication.

Authors:  P Nash; X Tang; S Orlicky; Q Chen; F B Gertler; M D Mendenhall; F Sicheri; T Pawson; M Tyers
Journal:  Nature       Date:  2001-11-29       Impact factor: 49.962

2.  Novel modular domain PB1 recognizes PC motif to mediate functional protein-protein interactions.

Authors:  T Ito; Y Matsui; T Ago; K Ota; H Sumimoto
Journal:  EMBO J       Date:  2001-08-01       Impact factor: 11.598

Review 3.  Cdc42--the centre of polarity.

Authors:  Sandrine Etienne-Manneville
Journal:  J Cell Sci       Date:  2004-03-15       Impact factor: 5.285

4.  Psr1p/Psr2p, two plasma membrane phosphatases with an essential DXDX(T/V) motif required for sodium stress response in yeast.

Authors:  S Siniossoglou; E C Hurt; H R Pelham
Journal:  J Biol Chem       Date:  2000-06-23       Impact factor: 5.157

5.  Phosphorylation of the Cdc42 exchange factor Cdc24 by the PAK-like kinase Cla4 may regulate polarized growth in yeast.

Authors:  M P Gulli; M Jaquenoud; Y Shimada; G Niederhäuser; P Wiget; M Peter
Journal:  Mol Cell       Date:  2000-11       Impact factor: 17.970

6.  A system of counteracting feedback loops regulates Cdc42p activity during spontaneous cell polarization.

Authors:  Ertugrul M Ozbudak; Attila Becskei; Alexander van Oudenaarden
Journal:  Dev Cell       Date:  2005-10       Impact factor: 12.270

7.  Interactions among proteins involved in bud-site selection and bud-site assembly in Saccharomyces cerevisiae.

Authors:  Y Zheng; A Bender; R A Cerione
Journal:  J Biol Chem       Date:  1995-01-13       Impact factor: 5.157

Review 8.  Beyond symmetry-breaking: competition and negative feedback in GTPase regulation.

Authors:  Chi-Fang Wu; Daniel J Lew
Journal:  Trends Cell Biol       Date:  2013-05-31       Impact factor: 20.808

9.  The nucleotide exchange factor Cdc24p may be regulated by auto-inhibition.

Authors:  Yukiko Shimada; Philippe Wiget; Marie-Pierre Gulli; Efrei Bi; Matthias Peter
Journal:  EMBO J       Date:  2004-02-26       Impact factor: 11.598

10.  Interactions between the bud emergence proteins Bem1p and Bem2p and Rho-type GTPases in yeast.

Authors:  J Peterson; Y Zheng; L Bender; A Myers; R Cerione; A Bender
Journal:  J Cell Biol       Date:  1994-12       Impact factor: 10.539

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  30 in total

1.  Regulation of Cdc42 polarization by the Rsr1 GTPase and Rga1, a Cdc42 GTPase-activating protein, in budding yeast.

Authors:  Mid Eum Lee; Wing-Cheong Lo; Kristi E Miller; Ching-Shan Chou; Hay-Oak Park
Journal:  J Cell Sci       Date:  2015-04-23       Impact factor: 5.285

2.  Local perturbation analysis: a computational tool for biophysical reaction-diffusion models.

Authors:  William R Holmes; May Anne Mata; Leah Edelstein-Keshet
Journal:  Biophys J       Date:  2015-01-20       Impact factor: 4.033

3.  Utilization of extracellular information before ligand-receptor binding reaches equilibrium expands and shifts the input dynamic range.

Authors:  Alejandra C Ventura; Alan Bush; Gustavo Vasen; Matías A Goldín; Brianne Burkinshaw; Nirveek Bhattacharjee; Albert Folch; Roger Brent; Ariel Chernomoretz; Alejandro Colman-Lerner
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-29       Impact factor: 11.205

4.  Parallel Actin-Independent Recycling Pathways Polarize Cdc42 in Budding Yeast.

Authors:  Benjamin Woods; Helen Lai; Chi-Fang Wu; Trevin R Zyla; Natasha S Savage; Daniel J Lew
Journal:  Curr Biol       Date:  2016-07-28       Impact factor: 10.834

5.  p21-activated Kinases (PAKs) Mediate the Phosphorylation of PREX2 Protein to Initiate Feedback Inhibition of Rac1 GTPase.

Authors:  Douglas Barrows; Sarah M Schoenfeld; Cindy Hodakoski; Antonina Silkov; Barry Honig; Anthony Couvillon; Aliaksei Shymanets; Bernd Nürnberg; John M Asara; Ramon Parsons
Journal:  J Biol Chem       Date:  2015-10-05       Impact factor: 5.157

Review 6.  Cell Polarity in Yeast.

Authors:  Jian-Geng Chiou; Mohan K Balasubramanian; Daniel J Lew
Journal:  Annu Rev Cell Dev Biol       Date:  2017-08-07       Impact factor: 13.827

Review 7.  Actin and endocytosis in budding yeast.

Authors:  Bruce L Goode; Julian A Eskin; Beverly Wendland
Journal:  Genetics       Date:  2015-02       Impact factor: 4.562

8.  Optogenetics reveals Cdc42 local activation by scaffold-mediated positive feedback and Ras GTPase.

Authors:  Iker Lamas; Laura Merlini; Aleksandar Vještica; Vincent Vincenzetti; Sophie G Martin
Journal:  PLoS Biol       Date:  2020-01-24       Impact factor: 8.029

9.  Role of competition between polarity sites in establishing a unique front.

Authors:  Chi-Fang Wu; Jian-Geng Chiou; Maria Minakova; Benjamin Woods; Denis Tsygankov; Trevin R Zyla; Natasha S Savage; Timothy C Elston; Daniel J Lew
Journal:  Elife       Date:  2015-11-02       Impact factor: 8.140

10.  Modeling the Dynamics of Cdc42 Oscillation in Fission Yeast.

Authors:  Bin Xu; Alexandra Jilkine
Journal:  Biophys J       Date:  2018-02-06       Impact factor: 4.033

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