Literature DB >> 24627493

Yeast AMP-activated protein kinase monitors glucose concentration changes and absolute glucose levels.

Loubna Bendrioua1, Maria Smedh, Joachim Almquist, Marija Cvijovic, Mats Jirstrand, Mattias Goksör, Caroline B Adiels, Stefan Hohmann.   

Abstract

Analysis of the time-dependent behavior of a signaling system can provide insight into its dynamic properties. We employed the nucleocytoplasmic shuttling of the transcriptional repressor Mig1 as readout to characterize Snf1-Mig1 dynamics in single yeast cells. Mig1 binds to promoters of target genes and mediates glucose repression. Mig1 is predominantly located in the nucleus when glucose is abundant. Upon glucose depletion, Mig1 is phosphorylated by the yeast AMP-activated kinase Snf1 and exported into the cytoplasm. We used a three-channel microfluidic device to establish a high degree of control over the glucose concentration exposed to cells. Following regimes of glucose up- and downshifts, we observed a very rapid response reaching a new steady state within less than 1 min, different glucose threshold concentrations depending on glucose up- or downshifts, a graded profile with increased cell-to-cell variation at threshold glucose concentrations, and biphasic behavior with a transient translocation of Mig1 upon the shift from high to intermediate glucose concentrations. Fluorescence loss in photobleaching and fluorescence recovery after photobleaching data demonstrate that Mig1 shuttles constantly between the nucleus and cytoplasm, although with different rates, depending on the presence of glucose. Taken together, our data suggest that the Snf1-Mig1 system has the ability to monitor glucose concentration changes as well as absolute glucose levels. The sensitivity over a wide range of glucose levels and different glucose concentration-dependent response profiles are likely determined by the close integration of signaling with the metabolism and may provide for a highly flexible and fast adaptation to an altered nutritional status.

Entities:  

Keywords:  AMP-activated Kinase (AMPK); Dynamic Control; Glucose Metabolism; Nuclear Translocation; Signal Transduction; Yeast Physiology

Mesh:

Substances:

Year:  2014        PMID: 24627493      PMCID: PMC4007474          DOI: 10.1074/jbc.M114.547976

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  52 in total

1.  beta-subunits of Snf1 kinase are required for kinase function and substrate definition.

Authors:  M C Schmidt; R R McCartney
Journal:  EMBO J       Date:  2000-09-15       Impact factor: 11.598

2.  Structural basis for redox regulation of Yap1 transcription factor localization.

Authors:  Matthew J Wood; Gisela Storz; Nico Tjandra
Journal:  Nature       Date:  2004-08-19       Impact factor: 49.962

3.  The Snf1 kinase controls glucose repression in yeast by modulating interactions between the Mig1 repressor and the Cyc8-Tup1 co-repressor.

Authors:  Manolis Papamichos-Chronakis; Thomas Gligoris; Dimitris Tzamarias
Journal:  EMBO Rep       Date:  2004-03-12       Impact factor: 8.807

4.  Glucose repression in Saccharomyces cerevisiae is directly associated with hexose phosphorylation by hexokinases PI and PII.

Authors:  M Rose; W Albig; K D Entian
Journal:  Eur J Biochem       Date:  1991-08-01

5.  Initiation of the transcriptional response to hyperosmotic shock correlates with the potential for volume recovery.

Authors:  Cecilia Geijer; Dagmara Medrala-Klein; Elzbieta Petelenz-Kurdziel; Abraham Ericsson; Maria Smedh; Mikael Andersson; Mattias Goksör; Mariona Nadal-Ribelles; Francesc Posas; Marcus Krantz; Bodil Nordlander; Stefan Hohmann
Journal:  FEBS J       Date:  2013-07-05       Impact factor: 5.542

6.  Glucose de-repression by yeast AMP-activated protein kinase SNF1 is controlled via at least two independent steps.

Authors:  Raúl García-Salcedo; Timo Lubitz; Gemma Beltran; Karin Elbing; Ye Tian; Simone Frey; Olaf Wolkenhauer; Marcus Krantz; Edda Klipp; Stefan Hohmann
Journal:  FEBS J       Date:  2014-03-04       Impact factor: 5.542

7.  Regulation of Snf1 kinase. Activation requires phosphorylation of threonine 210 by an upstream kinase as well as a distinct step mediated by the Snf4 subunit.

Authors:  R R McCartney; M C Schmidt
Journal:  J Biol Chem       Date:  2001-08-02       Impact factor: 5.157

Review 8.  Transcriptional control of nonfermentative metabolism in the yeast Saccharomyces cerevisiae.

Authors:  Hans-Joachim Schüller
Journal:  Curr Genet       Date:  2003-04-25       Impact factor: 3.886

9.  Glucose triggers different global responses in yeast, depending on the strength of the signal, and transiently stabilizes ribosomal protein mRNAs.

Authors:  Zhikang Yin; Séan Wilson; Nicole C Hauser; Helene Tournu; Jörg D Hoheisel; Alistair J P Brown
Journal:  Mol Microbiol       Date:  2003-05       Impact factor: 3.501

10.  The glucose-regulated nuclear localization of hexokinase 2 in Saccharomyces cerevisiae is Mig1-dependent.

Authors:  Deifilia Ahuatzi; Pilar Herrero; Tamara de la Cera; Fernando Moreno
Journal:  J Biol Chem       Date:  2004-01-08       Impact factor: 5.157

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  10 in total

1.  The β subunit of yeast AMP-activated protein kinase directs substrate specificity in response to alkaline stress.

Authors:  Dakshayini G Chandrashekarappa; Rhonda R McCartney; Allyson F O'Donnell; Martin C Schmidt
Journal:  Cell Signal       Date:  2016-08-31       Impact factor: 4.315

2.  Metabolic remodeling maintains a reducing environment for rapid activation of the yeast DNA replication checkpoint.

Authors:  Lili Li; Jie Wang; Zijia Yang; Yiling Zhao; Hui Jiang; Luguang Jiang; Wenya Hou; Risheng Ye; Qun He; Martin Kupiec; Brian Luke; Qinhong Cao; Zhi Qi; Zhen Li; Huiqiang Lou
Journal:  EMBO J       Date:  2022-01-14       Impact factor: 11.598

3.  Scalable and flexible inference framework for stochastic dynamic single-cell models.

Authors:  Sebastian Persson; Niek Welkenhuysen; Sviatlana Shashkova; Samuel Wiqvist; Patrick Reith; Gregor W Schmidt; Umberto Picchini; Marija Cvijovic
Journal:  PLoS Comput Biol       Date:  2022-05-19       Impact factor: 4.779

4.  Transcription factor clusters regulate genes in eukaryotic cells.

Authors:  Adam Jm Wollman; Sviatlana Shashkova; Erik G Hedlund; Rosmarie Friemann; Stefan Hohmann; Mark C Leake
Journal:  Elife       Date:  2017-08-25       Impact factor: 8.140

5.  A Nonlinear Mixed Effects Approach for Modeling the Cell-To-Cell Variability of Mig1 Dynamics in Yeast.

Authors:  Joachim Almquist; Loubna Bendrioua; Caroline Beck Adiels; Mattias Goksör; Stefan Hohmann; Mats Jirstrand
Journal:  PLoS One       Date:  2015-04-20       Impact factor: 3.240

Review 6.  Glucose repression in Saccharomyces cerevisiae.

Authors:  Ömur Kayikci; Jens Nielsen
Journal:  FEMS Yeast Res       Date:  2015-07-22       Impact factor: 2.796

7.  Single-cell study links metabolism with nutrient signaling and reveals sources of variability.

Authors:  Niek Welkenhuysen; Johannes Borgqvist; Mattias Backman; Loubna Bendrioua; Mattias Goksör; Caroline B Adiels; Marija Cvijovic; Stefan Hohmann
Journal:  BMC Syst Biol       Date:  2017-06-05

8.  FLO Genes Family and Transcription Factor MIG1 Regulate Saccharomyces cerevisiae Biofilm Formation During Immobilized Fermentation.

Authors:  Leyun Yang; Cheng Zheng; Yong Chen; Hanjie Ying
Journal:  Front Microbiol       Date:  2018-08-23       Impact factor: 5.640

9.  Mig1 localization exhibits biphasic behavior which is controlled by both metabolic and regulatory roles of the sugar kinases.

Authors:  Gregor W Schmidt; Niek Welkenhuysen; Tian Ye; Marija Cvijovic; Stefan Hohmann
Journal:  Mol Genet Genomics       Date:  2020-09-19       Impact factor: 3.291

10.  Transcription factors in eukaryotic cells can functionally regulate gene expression by acting in oligomeric assemblies formed from an intrinsically disordered protein phase transition enabled by molecular crowding.

Authors:  Mark C Leake
Journal:  Transcription       Date:  2018-08-09
  10 in total

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