Literature DB >> 24623192

Improved cyclopropene reporters for probing protein glycosylation.

David M Patterson1, Krysten A Jones, Jennifer A Prescher.   

Abstract

Cyclopropenes have emerged as a new class of bioorthogonal chemical reporters. These strained rings can be metabolically introduced into target biomolecules and covalently modified via mild cycloaddition chemistries. While versatile, existing cyclopropene scaffolds are inefficient reporters of protein glycosylation, owing to their branched structures and sluggish rates of reactivity. Here we describe a set of cyclopropenes for the robust detection of glycans on cell surfaces and isolated proteins. These scaffolds comprise carbamate linkages that are compatible with cellular biosynthetic pathways and exhibit rapid cycloaddition rates. Furthermore, these probes can be used in tandem with other classic bioorthogonal motifs-including azides and alkynes-to examine multiple biomolecules in tandem.

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Year:  2014        PMID: 24623192     DOI: 10.1039/c4mb00092g

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN: 1742-2051


  23 in total

1.  Fast, irreversible modification of cysteines through strain releasing conjugate additions of cyclopropenyl ketones.

Authors:  Natalee J Smith; Katarina Rohlfing; Lisa A Sawicki; Prathamesh M Kharkar; Samantha J Boyd; April M Kloxin; Joseph M Fox
Journal:  Org Biomol Chem       Date:  2018-03-09       Impact factor: 3.876

Review 2.  Click Chemistry in Proteomic Investigations.

Authors:  Christopher G Parker; Matthew R Pratt
Journal:  Cell       Date:  2020-02-13       Impact factor: 41.582

Review 3.  Modular and orthogonal synthesis of hybrid polymers and networks.

Authors:  Shuang Liu; Kevin T Dicker; Xinqiao Jia
Journal:  Chem Commun (Camb)       Date:  2015-03-28       Impact factor: 6.222

4.  Constructing New Bioorthogonal Reagents and Reactions.

Authors:  R David Row; Jennifer A Prescher
Journal:  Acc Chem Res       Date:  2018-05-04       Impact factor: 22.384

Review 5.  Chemistry-enabled methods for the visualization of cell-surface glycoproteins in Metazoans.

Authors:  Kelly N Chuh; Matthew R Pratt
Journal:  Glycoconj J       Date:  2015-04-28       Impact factor: 2.916

Review 6.  Advances in cell surface glycoengineering reveal biological function.

Authors:  Nicole Nischan; Jennifer J Kohler
Journal:  Glycobiology       Date:  2016-04-10       Impact factor: 4.313

Review 7.  Chemical Methods for Encoding and Decoding of Posttranslational Modifications.

Authors:  Kelly N Chuh; Anna R Batt; Matthew R Pratt
Journal:  Cell Chem Biol       Date:  2016-01-21       Impact factor: 8.116

8.  Lipidated cyclopropenes via a stable 3-N spirocyclopropene scaffold.

Authors:  Pratik Kumar; Ting Jiang; Omar Zainul; Alyssa N Preston; Sining Li; Joshua D Farr; Pavit Suri; Scott T Laughlin
Journal:  Tetrahedron Lett       Date:  2018-08-07       Impact factor: 2.415

9.  A photocaged, cyclopropene-containing analog of the amino acid neurotransmitter glutamate.

Authors:  Pratik Kumar; David Shukhman; Scott T Laughlin
Journal:  Tetrahedron Lett       Date:  2016-11-11       Impact factor: 2.415

10.  Systemic Fluorescence Imaging of Zebrafish Glycans with Bioorthogonal Chemistry.

Authors:  Paresh Agarwal; Brendan J Beahm; Peyton Shieh; Carolyn R Bertozzi
Journal:  Angew Chem Int Ed Engl       Date:  2015-07-31       Impact factor: 15.336

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