Literature DB >> 26230529

Systemic Fluorescence Imaging of Zebrafish Glycans with Bioorthogonal Chemistry.

Paresh Agarwal1, Brendan J Beahm1, Peyton Shieh1, Carolyn R Bertozzi2.   

Abstract

Vertebrate glycans constitute a large, important, and dynamic set of post-translational modifications that are notoriously difficult to manipulate and image. Although the chemical reporter strategy has been used in conjunction with bioorthogonal chemistry to image the external glycosylation state of live zebrafish and detect tumor-associated glycans in mice, the ability to image glycans systemically within a live organism has remained elusive. Here, we report a method that combines the metabolic incorporation of a cyclooctyne-functionalized sialic acid derivative with a ligation reaction of a fluorogenic tetrazine, allowing for the imaging of sialylated glycoconjugates within live zebrafish embryos.
© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  bioorthogonal chemistry; fluorescent probes; glycans; glycosylation; sialic acids

Mesh:

Substances:

Year:  2015        PMID: 26230529      PMCID: PMC4694582          DOI: 10.1002/anie.201504249

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  53 in total

1.  Amino acids for Diels-Alder reactions in living cells.

Authors:  Tilman Plass; Sigrid Milles; Christine Koehler; Jędrzej Szymański; Rainer Mueller; Manfred Wiessler; Carsten Schultz; Edward A Lemke
Journal:  Angew Chem Int Ed Engl       Date:  2012-03-30       Impact factor: 15.336

2.  Synthesis and evaluation of a series of 1,2,4,5-tetrazines for bioorthogonal conjugation.

Authors:  Mark R Karver; Ralph Weissleder; Scott A Hilderbrand
Journal:  Bioconjug Chem       Date:  2011-10-24       Impact factor: 4.774

3.  Evaluation of analogues of GalNAc as substrates for enzymes of the mammalian GalNAc salvage pathway.

Authors:  Sabrina Pouilly; Vanessa Bourgeaux; Friedrich Piller; Véronique Piller
Journal:  ACS Chem Biol       Date:  2012-02-09       Impact factor: 5.100

4.  Visualizing enveloping layer glycans during zebrafish early embryogenesis.

Authors:  Jeremy M Baskin; Karen W Dehnert; Scott T Laughlin; Sharon L Amacher; Carolyn R Bertozzi
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-20       Impact factor: 11.205

5.  Clicking 1,2,4,5-tetrazine and cyclooctynes with tunable reaction rates.

Authors:  Weixuan Chen; Danzhu Wang; Chaofeng Dai; Donald Hamelberg; Binghe Wang
Journal:  Chem Commun (Camb)       Date:  2011-12-12       Impact factor: 6.222

6.  Reactive polymer enables efficient in vivo bioorthogonal chemistry.

Authors:  Neal K Devaraj; Greg M Thurber; Edmund J Keliher; Brett Marinelli; Ralph Weissleder
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-12       Impact factor: 11.205

7.  Biocompatible copper(I) catalysts for in vivo imaging of glycans.

Authors:  David Soriano Del Amo; Wei Wang; Hao Jiang; Christen Besanceney; Amy C Yan; Matthew Levy; Yi Liu; Florence L Marlow; Peng Wu
Journal:  J Am Chem Soc       Date:  2010-11-09       Impact factor: 15.419

8.  Imaging the sialome during zebrafish development with copper-free click chemistry.

Authors:  Karen W Dehnert; Jeremy M Baskin; Scott T Laughlin; Brendan J Beahm; Natasha N Naidu; Sharon L Amacher; Carolyn R Bertozzi
Journal:  Chembiochem       Date:  2012-01-20       Impact factor: 3.164

9.  Readily accessible bicyclononynes for bioorthogonal labeling and three-dimensional imaging of living cells.

Authors:  Jan Dommerholt; Samuel Schmidt; Rinske Temming; Linda J A Hendriks; Floris P J T Rutjes; Jan C M van Hest; Dirk J Lefeber; Peter Friedl; Floris L van Delft
Journal:  Angew Chem Int Ed Engl       Date:  2010-12-03       Impact factor: 15.336

10.  Metabolic labeling of fucosylated glycans in developing zebrafish.

Authors:  Karen W Dehnert; Brendan J Beahm; Thinh T Huynh; Jeremy M Baskin; Scott T Laughlin; Wei Wang; Peng Wu; Sharon L Amacher; Carolyn R Bertozzi
Journal:  ACS Chem Biol       Date:  2011-04-05       Impact factor: 5.100

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  18 in total

Review 1.  Targeting the N terminus for site-selective protein modification.

Authors:  Christian B Rosen; Matthew B Francis
Journal:  Nat Chem Biol       Date:  2017-06-20       Impact factor: 15.040

Review 2.  Visualizing glycans on single cells and tissues-Visualizing glycans on single cells and tissues.

Authors:  Ben Ovryn; Jie Li; Senlian Hong; Peng Wu
Journal:  Curr Opin Chem Biol       Date:  2017-06-01       Impact factor: 8.822

3.  Bioorthogonal chemistry.

Authors:  Samuel L Scinto; Didier A Bilodeau; Robert Hincapie; Wankyu Lee; Sean S Nguyen; Minghao Xu; Christopher W Am Ende; M G Finn; Kathrin Lang; Qing Lin; John Paul Pezacki; Jennifer A Prescher; Marc S Robillard; Joseph M Fox
Journal:  Nat Rev Methods Primers       Date:  2021-04-15

Review 4.  Designing sugar mimetics: non-natural pyranosides as innovative chemical tools.

Authors:  Regis C Saliba; Nicola Lb Pohl
Journal:  Curr Opin Chem Biol       Date:  2016-09-10       Impact factor: 8.822

Review 5.  Advances in cell surface glycoengineering reveal biological function.

Authors:  Nicole Nischan; Jennifer J Kohler
Journal:  Glycobiology       Date:  2016-04-10       Impact factor: 4.313

6.  Advances in Tetrazine Bioorthogonal Chemistry Driven by the Synthesis of Novel Tetrazines and Dienophiles.

Authors:  Haoxing Wu; Neal K Devaraj
Journal:  Acc Chem Res       Date:  2018-04-11       Impact factor: 22.384

7.  Phosphine-Activated Lysine Analogues for Fast Chemical Control of Protein Subcellular Localization and Protein SUMOylation.

Authors:  Joshua S Wesalo; Ji Luo; Kunihiko Morihiro; Jihe Liu; Alexander Deiters
Journal:  Chembiochem       Date:  2019-10-30       Impact factor: 3.164

Review 8.  Nongenetic Bioconjugation Strategies for Modifying Cell Membranes and Membrane Proteins: A Review.

Authors:  Shambojit Roy; Jennifer N Cha; Andrew P Goodwin
Journal:  Bioconjug Chem       Date:  2020-11-04       Impact factor: 4.774

9.  An Advanced 'clickECM' That Can be Modified by the Inverse-Electron-Demand Diels-Alder Reaction.

Authors:  Svenja Nellinger; Mareike A Rapp; Alexander Southan; Valentin Wittmann; Petra J Kluger
Journal:  Chembiochem       Date:  2021-08-17       Impact factor: 3.461

10.  Bioorthogonal two-component drug delivery in HER2(+) breast cancer mouse models.

Authors:  Sudath Hapuarachchige; Yoshinori Kato; Dmitri Artemov
Journal:  Sci Rep       Date:  2016-04-12       Impact factor: 4.379

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