Literature DB >> 24618358

Mechanisms of functional promiscuity by HP1 proteins.

Daniele Canzio1, Adam Larson2, Geeta J Narlikar3.   

Abstract

Heterochromatin protein 1 (HP1) proteins were originally identified as critical components in heterochromatin-mediated gene silencing and are now recognized to play essential roles in several other processes including gene activation. Several eukaryotes possess more than one HP1 paralog. Despite high sequence conservation, the HP1 paralogs achieve diverse functions. Further, in many cases, the same HP1 paralog is implicated in multiple functions. Recent biochemical studies have revealed interesting paralog-specific biophysical differences and unanticipated conformational versatility in HP1 proteins that may account for this functional promiscuity. Here we review these findings and describe a molecular framework that aims to link the conformational flexibility of HP1 proteins observed in vitro with their functional promiscuity observed in vivo.
Copyright © 2014 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  HP1; chromatin; conformational flexibility; functional versatility

Mesh:

Substances:

Year:  2014        PMID: 24618358      PMCID: PMC4077871          DOI: 10.1016/j.tcb.2014.01.002

Source DB:  PubMed          Journal:  Trends Cell Biol        ISSN: 0962-8924            Impact factor:   20.808


  92 in total

1.  The nucleation and maintenance of heterochromatin by a histone deacetylase in fission yeast.

Authors:  Takatomi Yamada; Wolfgang Fischle; Tomoyasu Sugiyama; C David Allis; Shiv I S Grewal
Journal:  Mol Cell       Date:  2005-10-28       Impact factor: 17.970

2.  Swi6/HP1 recruits a JmjC domain protein to facilitate transcription of heterochromatic repeats.

Authors:  Martin Zofall; Shiv I S Grewal
Journal:  Mol Cell       Date:  2006-06-09       Impact factor: 17.970

3.  The structure of mouse HP1 suggests a unique mode of single peptide recognition by the shadow chromo domain dimer.

Authors:  S V Brasher; B O Smith; R H Fogh; D Nietlispach; A Thiru; P R Nielsen; R W Broadhurst; L J Ball; N V Murzina; E D Laue
Journal:  EMBO J       Date:  2000-04-03       Impact factor: 11.598

4.  Hinge and chromoshadow of HP1α participate in recognition of K9 methylated histone H3 in nucleosomes.

Authors:  Yuichi Mishima; Makoto Watanabe; Toru Kawakami; Chanika D Jayasinghe; Junji Otani; Yusuke Kikugawa; Masahiro Shirakawa; Hiroshi Kimura; Osamu Nishimura; Saburo Aimoto; Shoji Tajima; Isao Suetake
Journal:  J Mol Biol       Date:  2012-11-06       Impact factor: 5.469

5.  SUMOylation promotes de novo targeting of HP1α to pericentric heterochromatin.

Authors:  Christèle Maison; Delphine Bailly; Danièle Roche; Rocio Montes de Oca; Aline V Probst; Isabelle Vassias; Florent Dingli; Bérengère Lombard; Damarys Loew; Jean-Pierre Quivy; Geneviève Almouzni
Journal:  Nat Genet       Date:  2011-02-13       Impact factor: 38.330

6.  Cell cycle behavior of human HP1 subtypes: distinct molecular domains of HP1 are required for their centromeric localization during interphase and metaphase.

Authors:  Tomohiro Hayakawa; Tokuko Haraguchi; Hiroshi Masumoto; Yasushi Hiraoka
Journal:  J Cell Sci       Date:  2003-07-02       Impact factor: 5.285

7.  Evidence for the existence of an HP1-mediated subcode within the histone code.

Authors:  Gwen Lomberk; Debora Bensi; Martín E Fernandez-Zapico; Raul Urrutia
Journal:  Nat Cell Biol       Date:  2006-03-12       Impact factor: 28.824

8.  Heterochromatin protein 1, a known suppressor of position-effect variegation, is highly conserved in Drosophila.

Authors:  R F Clark; S C Elgin
Journal:  Nucleic Acids Res       Date:  1992-11-25       Impact factor: 16.971

9.  Human Orc2 localizes to centrosomes, centromeres and heterochromatin during chromosome inheritance.

Authors:  Supriya G Prasanth; Kannanganattu V Prasanth; Khalid Siddiqui; David L Spector; Bruce Stillman
Journal:  EMBO J       Date:  2004-06-24       Impact factor: 11.598

10.  INCENP centromere and spindle targeting: identification of essential conserved motifs and involvement of heterochromatin protein HP1.

Authors:  A M Ainsztein; S E Kandels-Lewis; A M Mackay; W C Earnshaw
Journal:  J Cell Biol       Date:  1998-12-28       Impact factor: 10.539

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  80 in total

1.  The nuclear localization pattern and interaction partners of GTF2IRD1 demonstrate a role in chromatin regulation.

Authors:  Paulina Carmona-Mora; Jocelyn Widagdo; Florence Tomasetig; Cesar P Canales; Yeojoon Cha; Wei Lee; Abdullah Alshawaf; Mirella Dottori; Renee M Whan; Edna C Hardeman; Stephen J Palmer
Journal:  Hum Genet       Date:  2015-08-15       Impact factor: 4.132

2.  Heterochromatin Protein 1γ Is a Novel Epigenetic Repressor of Human Embryonic ϵ-Globin Gene Expression.

Authors:  Yadong Wang; Ying Wang; Lingling Ma; Min Nie; Junyi Ju; Ming Liu; Yexuan Deng; Bing Yao; Tao Gui; Xinyu Li; Chan Guo; Chi Ma; Renxiang Tan; Quan Zhao
Journal:  J Biol Chem       Date:  2017-02-01       Impact factor: 5.157

3.  Phosphorylation-dephosphorylation cycle of HP1α governs accurate mitotic progression.

Authors:  Arindam Chakraborty; Supriya G Prasanth
Journal:  Cell Cycle       Date:  2014-04-30       Impact factor: 4.534

Review 4.  Beyond the histone tale: HP1α deregulation in breast cancer epigenetics.

Authors:  Johan Vad-Nielsen; Anders Lade Nielsen
Journal:  Cancer Biol Ther       Date:  2015       Impact factor: 4.742

5.  A regulatory circuit HP1γ/miR-451a/c-Myc promotes prostate cancer progression.

Authors:  C Chang; J Liu; W He; M Qu; X Huang; Y Deng; L Shen; X Zhao; H Guo; J Jiang; X Y Fu; R Huang; D Zhang; J Yan
Journal:  Oncogene       Date:  2017-10-02       Impact factor: 9.867

Review 6.  ChIP-ping the branches of the tree: functional genomics and the evolution of eukaryotic gene regulation.

Authors:  Georgi K Marinov; Anshul Kundaje
Journal:  Brief Funct Genomics       Date:  2018-03-01       Impact factor: 4.241

7.  A demethylation deficient isoform of the lysine demethylase KDM2A interacts with pericentromeric heterochromatin in an HP1a-dependent manner.

Authors:  Dijana Lađinović; Jitka Novotná; Soňa Jakšová; Ivan Raška; Tomáš Vacík
Journal:  Nucleus       Date:  2017-08-17       Impact factor: 4.197

8.  Prefrontal cortex expression of chromatin modifier genes in male WSP and WSR mice changes across ethanol dependence, withdrawal, and abstinence.

Authors:  Joel G Hashimoto; David P Gavin; Kristine M Wiren; John C Crabbe; Marina Guizzetti
Journal:  Alcohol       Date:  2017-03-14       Impact factor: 2.405

9.  Identifying Nuclear Matrix-Attached DNA Across the Genome.

Authors:  Jason R Dobson; Deli Hong; A Rasim Barutcu; Hai Wu; Anthony N Imbalzano; Jane B Lian; Janet L Stein; Andre J van Wijnen; Jeffrey A Nickerson; Gary S Stein
Journal:  J Cell Physiol       Date:  2017-01-05       Impact factor: 6.384

10.  Recurrent Gene Duplication Diversifies Genome Defense Repertoire in Drosophila.

Authors:  Mia T Levine; Helen M Vander Wende; Emily Hsieh; EmilyClare P Baker; Harmit S Malik
Journal:  Mol Biol Evol       Date:  2016-03-14       Impact factor: 16.240

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