Literature DB >> 23142645

Hinge and chromoshadow of HP1α participate in recognition of K9 methylated histone H3 in nucleosomes.

Yuichi Mishima1, Makoto Watanabe, Toru Kawakami, Chanika D Jayasinghe, Junji Otani, Yusuke Kikugawa, Masahiro Shirakawa, Hiroshi Kimura, Osamu Nishimura, Saburo Aimoto, Shoji Tajima, Isao Suetake.   

Abstract

The majority of the genome in eukaryotes is packaged into transcriptionally inactive chromatin. Heterochromatin protein 1 (HP1) is a major player in the establishment and maintenance of heterochromatin. HP1 specifically recognizes a methylated lysine residue at position 9 in histone H3 through its N-terminal chromo domain (CD). To elucidate the binding properties of HP1α to nucleosomes in vitro, we reconstituted nucleosomes containing histone H3 trimethylated at lysine 9. HP1α exhibited high-affinity binding to nucleosomes containing methylated histone H3 in a nucleosome core-number-dependent manner. The hinge region (HR) connecting the CD and C-terminal chromoshadow domain (CSD), and the CSD contributed to the selective binding of HP1α to histone H3 with trimethylated lysine 9 through weak DNA binding and by suppressing the DNA binding, respectively. We propose that not only the specific recognition of lysine 9 methylation of histone H3 by the CD but also the HR and the CSD cooperatively contribute to the selective binding of HP1α to histone H3 lysine 9 methylated nucleosomes.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 23142645     DOI: 10.1016/j.jmb.2012.10.018

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  19 in total

Review 1.  Mechanisms of functional promiscuity by HP1 proteins.

Authors:  Daniele Canzio; Adam Larson; Geeta J Narlikar
Journal:  Trends Cell Biol       Date:  2014-03-04       Impact factor: 20.808

2.  Quantification of the effect of site-specific histone acetylation on chromatin transcription rate.

Authors:  Masatoshi Wakamori; Kohki Okabe; Kiyoe Ura; Takashi Funatsu; Masahiro Takinoue; Takashi Umehara
Journal:  Nucleic Acids Res       Date:  2020-12-16       Impact factor: 16.971

3.  Interactions of HP1 Bound to H3K9me3 Dinucleosome by Molecular Simulations and Biochemical Assays.

Authors:  Shuhei Watanabe; Yuichi Mishima; Masahiro Shimizu; Isao Suetake; Shoji Takada
Journal:  Biophys J       Date:  2018-04-21       Impact factor: 4.033

Review 4.  Towards understanding methyllysine readout.

Authors:  Catherine A Musselman; Sepideh Khorasanizadeh; Tatiana G Kutateladze
Journal:  Biochim Biophys Acta       Date:  2014-04-13

5.  The interplay between H2A.Z and H3K9 methylation in regulating HP1α binding to linker histone-containing chromatin.

Authors:  Daniel P Ryan; David J Tremethick
Journal:  Nucleic Acids Res       Date:  2018-10-12       Impact factor: 16.971

6.  DYRK1A phoshorylates histone H3 to differentially regulate the binding of HP1 isoforms and antagonize HP1-mediated transcriptional repression.

Authors:  Suk Min Jang; Saliha Azebi; Guillaume Soubigou; Christian Muchardt
Journal:  EMBO Rep       Date:  2014-05-12       Impact factor: 8.807

7.  HP1 proteins compact DNA into mechanically and positionally stable phase separated domains.

Authors:  Madeline M Keenen; David Brown; Lucy D Brennan; Roman Renger; Harrison Khoo; Christopher R Carlson; Bo Huang; Stephan W Grill; Geeta J Narlikar; Sy Redding
Journal:  Elife       Date:  2021-03-04       Impact factor: 8.140

8.  Differential distribution of HP1 proteins after trichostatin a treatment influences chromosomal stability in HCT116 and WI-38 cells.

Authors:  Rodrigo González-Barrios; Ernesto Soto-Reyes; Ricardo Quiroz-Baez; Eunice Fabián-Morales; José Díaz-Chávez; Victor Del Castillo; Julia Mendoza; Alejandro López-Saavedra; Clementina Castro; Luis A Herrera
Journal:  Cell Div       Date:  2014-12-30       Impact factor: 5.130

9.  Biophysical Properties of HP1-Mediated Heterochromatin.

Authors:  Serena Sanulli; John D Gross; Geeta J Narlikar
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2020-06-03

10.  Epigenetic synergy between decitabine and platinum derivatives.

Authors:  Taichun Qin; Jiali Si; Noël J-M Raynal; Xiaodan Wang; Vazganush Gharibyan; Saira Ahmed; Xin Hu; Chunlei Jin; Yue Lu; Jingmin Shu; Marcos Rh Estecio; Jaroslav Jelinek; Jean-Pierre J Issa
Journal:  Clin Epigenetics       Date:  2015-09-11       Impact factor: 6.551

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