| Literature DB >> 24611054 |
Karthik Bodhinathan1, Paul A Slesinger2.
Abstract
Alcohol (ethanol)-induced behaviors may arise from direct interaction of alcohol with discrete protein cavities within brain proteins. Recent structural and biochemical studies have provided new insights into the mechanism of alcohol-dependent activation of G protein-gated inwardly rectifying potassium (GIRK) channels, which regulate neuronal responses in the brain reward circuit. GIRK channels contain an alcohol binding pocket formed at the interface of two adjacent channel subunits. Here, we discuss the physiochemical properties of the alcohol pocket and the roles of G protein βγ subunits and membrane phospholipid PIP2 in regulating the alcohol response of GIRK channels. Some of the features of alcohol modulation of GIRK channels may be common to other alcohol-sensitive brain proteins. We discuss the possibility of alcohol-selective therapeutics that block alcohol access to the pocket. Understanding alcohol recognition and modulation of brain proteins is essential for development of therapeutics for alcohol abuse and addiction.Entities:
Keywords: G proteins; GIRK; Kir3; PIP2; addiction; alcohol; potassium channels
Year: 2014 PMID: 24611054 PMCID: PMC3933770 DOI: 10.3389/fphys.2014.00076
Source DB: PubMed Journal: Front Physiol ISSN: 1664-042X Impact factor: 4.566
Figure 1Structural views of alcohol and PIP2 pockets in GIRK2. (A) Schematic of GIRK channel monomer (above) and tetramer (below) depicting the N and C terminal regions, and the M1, M2 transmembrane domains. (B) Crystal structure (3SYA) of GIRK2 channel (3.6 Å resolution; two of four subunits shown; adapted from Whorton and MacKinnon, 2011) bound to PI(4,5)P2/PIP2 (indicated by the arrow). The PIP2 binding site is located at the interface between transmembrane and cytosolic domains of GIRK channel. Solid white lines indicate the approximate boundary of the membrane lipid bilayer. (C) Enlarged view of the alcohol pocket in GIRK2 channel formed by part of N-terminal domain, βD-βE and βL-βM loops from two adjacent subunits (Aryal et al., 2009). Amino acids lining the alcohol pocket are indicated, plus critical Gβγ site L344 on the GIRK2 crystal structure (4KFM, Whorton and MacKinnon, 2013). For a view of alcohol bound to the closely related Kir2.1 channel see Aryal et al., 2009. (D) Enlarged view of the PIP2 binding site reveals key residues (shown in ball and stick model) involved in binding PIP2 and stabilizing the channel's open state. Also indicated are the major points of electrostatic coordination (white dashed line) between the 4′ and 5′ phosphate of PIP2 molecule and critical residues (R64, K194, K199, K200) in GIRK2 channel (4SYA).
Figure 2Working model of GIRK channel gating. Alcohol binds directly to the alcohol pocket and Gβγ binds very close to the alcohol pocket. The binding leads to multi-domain conformation changes that culminate in stabilization of the PIP2-bound open state of GIRK channel; involving increase in PIP2-GIRK affinity (Bodhinathan and Slesinger, 2013) and possibly involving structural changes to the PIP2 binding site described in Figure 1. In addition, small molecule modulators of GIRK channel can possibly interact with the alcohol binding site, or may directly stabilize PIP2-bound open state of the GIRK channels. These events lead to the movement and opening of the G loop and the transmembrane gates, the final step of activation leading to K+ ion permeation through the GIRK channel pore.