Literature DB >> 24606931

Regulation of ion channel function by the host lipid bilayer examined by a stopped-flow spectrofluorometric assay.

Radda Rusinova1, Dorothy M Kim2, Crina M Nimigean3, Olaf S Andersen4.   

Abstract

To examine the function of ligand-gated ion channels in a defined membrane environment, we developed a robust sequential-mixing fluorescence-based stopped-flow assay. Channel activity is determined using a channel-permeable quencher (e.g., thallium, Tl(+)) of a water-soluble fluorophore (8-aminonaphthalene-1,3,6-trisulfonic acid) encapsulated in large unilamellar vesicles in which the channel of interest has been reconstituted, which allows for rapid solution changes. To validate the method, we explored the activation of wild-type KcsA channel, as well as it's noninactivating (E71A) KcsA mutant, by extravesicular protons (H(+)). For both channel types, the day-to-day variability in the reconstitution yield (as judged from the time course of fluorescence quenching) is <10%. The activation curve for E71A KcsA is similar to that obtained previously using single-channel electrophysiology, and the activation curves for wild-type and E71A KcsA are indistinguishable, indicating that channel activation and inactivation are separate processes. We then investigated the regulation of KcsA activation by changes in lipid bilayer composition. Increasing the acyl chain length (from C18:1 to C22:1 in diacylphosphatidylcholine), but not the mole fraction of POPG (>0.25) in the bilayer-forming phospholipid mixture, alters KcsA H(+) gating. The bilayer-thickness-dependent shift in the activation curve is suggestive of a decrease in an apparent H(+) affinity and cooperativity. The control over bilayer environment and time resolution makes this method a powerful assay for exploring ligand activation and inactivation of ion channels, and how channel gating varies with changes in the channels' lipid bilayer environment or other regulatory processes.
Copyright © 2014 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2014        PMID: 24606931      PMCID: PMC4026792          DOI: 10.1016/j.bpj.2014.01.027

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  54 in total

1.  Structural rearrangements underlying K+-channel activation gating.

Authors:  E Perozo; D M Cortes; L G Cuello
Journal:  Science       Date:  1999-07-02       Impact factor: 47.728

2.  Capsaicin regulates voltage-dependent sodium channels by altering lipid bilayer elasticity.

Authors:  J A Lundbaek; P Birn; S E Tape; G E S Toombes; R Søgaard; Roger E Koeppe; S M Gruner; A J Hansen; O S Andersen
Journal:  Mol Pharmacol       Date:  2005-06-20       Impact factor: 4.436

3.  Three-dimensional architecture and gating mechanism of a K+ channel studied by EPR spectroscopy.

Authors:  E Perozo; D M Cortes; L G Cuello
Journal:  Nat Struct Biol       Date:  1998-06

4.  pH-dependent gating in the Streptomyces lividans K+ channel.

Authors:  L G Cuello; J G Romero; D M Cortes; E Perozo
Journal:  Biochemistry       Date:  1998-03-10       Impact factor: 3.162

5.  Functional reconstitution of a prokaryotic K+ channel.

Authors:  L Heginbotham; L Kolmakova-Partensky; C Miller
Journal:  J Gen Physiol       Date:  1998-06       Impact factor: 4.086

6.  The interfacial lipid binding site on the potassium channel KcsA is specific for anionic phospholipids.

Authors:  Phedra Marius; Simon J Alvis; J Malcolm East; Anthony G Lee
Journal:  Biophys J       Date:  2005-09-30       Impact factor: 4.033

7.  Molecular sorting of lipids by bacteriorhodopsin in dilauroylphosphatidylcholine/distearoylphosphatidylcholine lipid bilayers.

Authors:  F Dumas; M M Sperotto; M C Lebrun; J F Tocanne; O G Mouritsen
Journal:  Biophys J       Date:  1997-10       Impact factor: 4.033

Review 8.  How lipids affect the activities of integral membrane proteins.

Authors:  Anthony G Lee
Journal:  Biochim Biophys Acta       Date:  2004-11-03

9.  Thiazolidinedione insulin sensitizers alter lipid bilayer properties and voltage-dependent sodium channel function: implications for drug discovery.

Authors:  Radda Rusinova; Karl F Herold; R Lea Sanford; Denise V Greathouse; Hugh C Hemmings; Olaf S Andersen
Journal:  J Gen Physiol       Date:  2011-08       Impact factor: 4.086

10.  Single streptomyces lividans K(+) channels: functional asymmetries and sidedness of proton activation.

Authors:  L Heginbotham; M LeMasurier; L Kolmakova-Partensky; C Miller
Journal:  J Gen Physiol       Date:  1999-10       Impact factor: 4.086

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  23 in total

Review 1.  Channel function reconstitution and re-animation: a single-channel strategy in the postcrystal age.

Authors:  Shigetoshi Oiki
Journal:  J Physiol       Date:  2015-05-14       Impact factor: 5.182

2.  Challenges and advances in atomistic simulations of potassium and sodium ion channel gating and permeation.

Authors:  Kevin R DeMarco; Slava Bekker; Igor Vorobyov
Journal:  J Physiol       Date:  2018-12-19       Impact factor: 5.182

3.  The Water Permeability and Pore Entrance Structure of Aquaporin-4 Depend on Lipid Bilayer Thickness.

Authors:  Jihong Tong; Zhe Wu; Margaret M Briggs; Klaus Schulten; Thomas J McIntosh
Journal:  Biophys J       Date:  2016-07-12       Impact factor: 4.033

4.  Inactivation in the potassium channel KcsA.

Authors:  Yunyao Xu; Ann E McDermott
Journal:  J Struct Biol X       Date:  2019-06-12

5.  Mechanisms underlying drug-mediated regulation of membrane protein function.

Authors:  Radda Rusinova; Changhao He; Olaf S Andersen
Journal:  Proc Natl Acad Sci U S A       Date:  2021-11-16       Impact factor: 11.205

6.  A KcsA/MloK1 chimeric ion channel has lipid-dependent ligand-binding energetics.

Authors:  Jason G McCoy; Radda Rusinova; Dorothy M Kim; Julia Kowal; Sourabh Banerjee; Alexis Jaramillo Cartagena; Ameer N Thompson; Ludmila Kolmakova-Partensky; Henning Stahlberg; Olaf S Andersen; Crina M Nimigean
Journal:  J Biol Chem       Date:  2014-02-10       Impact factor: 5.157

7.  Stopped-Flow Fluorometric Ion Flux Assay for Ligand-Gated Ion Channel Studies.

Authors:  David J Posson; Radda Rusinova; Olaf S Andersen; Crina M Nimigean
Journal:  Methods Mol Biol       Date:  2018

8.  cDICE method produces giant lipid vesicles under physiological conditions of charged lipids and ionic solutions.

Authors:  Matthew C Blosser; Benjamin G Horst; Sarah L Keller
Journal:  Soft Matter       Date:  2016-08-11       Impact factor: 3.679

9.  Determinants of conductance of a bacterial voltage-gated sodium channel.

Authors:  Ada Y Chen; Bernard R Brooks; Ana Damjanovic
Journal:  Biophys J       Date:  2021-06-30       Impact factor: 3.699

10.  Correlating ion channel structure and function.

Authors:  Philipp A M Schmidpeter; Crina M Nimigean
Journal:  Methods Enzymol       Date:  2021-03-25       Impact factor: 1.682

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