Literature DB >> 24600312

Evidence of selection pressures of neuraminidase gene (NA) of influenza A virus subtype H5N1 on different hosts in Guangxi Province of China.

Youhua Chen1, You-Fang Chen2.   

Abstract

In the present study, the possible evidence of positive selection was analyzed for the neuraminidase (NA) sequences of Guangxi H5N1 strains of China. Based on an overall site-specific positive selection analysis, it was found that NA gene of H5N1 Guangxi strains underwent purifying selection and no significant positively selected sites were identified. For the branch-specific positive selection analysis, there was no positive selection evidence for the branches leading to different poultry hosts (chicken, duck and goose). Conclusively, positive selection seems not possible (if not rare) for the NA gene in influenza H5N1 subtype, at least for the samples found in Guangxi Province of China.

Entities:  

Keywords:  Adaptive evolution; Host specificity; Influenza A virus; Positive selection

Year:  2013        PMID: 24600312      PMCID: PMC3942850          DOI: 10.1016/j.sjbs.2013.09.009

Source DB:  PubMed          Journal:  Saudi J Biol Sci        ISSN: 2213-7106            Impact factor:   4.219


  35 in total

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5.  No observed effect of homologous recombination on influenza C virus evolution.

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Authors:  Wenfu Li; Weifeng Shi; Huijie Qiao; Simon Y W Ho; Arong Luo; Yanzhou Zhang; Chaodong Zhu
Journal:  Virol J       Date:  2011-04-21       Impact factor: 4.099

8.  Evolutionary analysis of inter-farm transmission dynamics in a highly pathogenic avian influenza epidemic.

Authors:  Arnaud Bataille; Frank van der Meer; Arjan Stegeman; Guus Koch
Journal:  PLoS Pathog       Date:  2011-06-23       Impact factor: 6.823

9.  Pandemic influenza A virus codon usage revisited: biases, adaptation and implications for vaccine strain development.

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Journal:  Virol J       Date:  2012-11-08       Impact factor: 4.099

10.  Panorama phylogenetic diversity and distribution of Type A influenza virus.

Authors:  Shuo Liu; Kang Ji; Jiming Chen; Di Tai; Wenming Jiang; Guangyu Hou; Jie Chen; Jinping Li; Baoxu Huang
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