Literature DB >> 24591522

Regulation of the X chromosomes in Caenorhabditis elegans.

Susan Strome1, William G Kelly, Sevinc Ercan, Jason D Lieb.   

Abstract

Dosage compensation, which regulates the expression of genes residing on the sex chromosomes, has provided valuable insights into chromatin-based mechanisms of gene regulation. The nematode Caenorhabditis elegans has adopted various strategies to down-regulate and even nearly silence the X chromosomes. This article discusses the different chromatin-based strategies used in somatic tissues and in the germline to modulate gene expression from the C. elegans X chromosomes and compares these strategies to those used by other organisms to cope with similar X-chromosome dosage differences.

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Year:  2014        PMID: 24591522      PMCID: PMC3942922          DOI: 10.1101/cshperspect.a018366

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  86 in total

1.  A molecular link between gene-specific and chromosome-wide transcriptional repression.

Authors:  Diana S Chu; Heather E Dawes; Jason D Lieb; Raymond C Chan; Annie F Kuo; Barbara J Meyer
Journal:  Genes Dev       Date:  2002-04-01       Impact factor: 11.361

Review 2.  Sexual antagonism and X inactivation--the SAXI hypothesis.

Authors:  Chung I Wu; Eugene Yujun Xu
Journal:  Trends Genet       Date:  2003-05       Impact factor: 11.639

3.  High nucleosome occupancy is encoded at X-linked gene promoters in C. elegans.

Authors:  Sevinç Ercan; Yaniv Lubling; Eran Segal; Jason D Lieb
Journal:  Genome Res       Date:  2010-12-22       Impact factor: 9.043

4.  Subunit contributions to histone methyltransferase activities of fly and worm polycomb group complexes.

Authors:  Carrie S Ketel; Erica F Andersen; Marcus L Vargas; Jinkyo Suh; Susan Strome; Jeffrey A Simon
Journal:  Mol Cell Biol       Date:  2005-08       Impact factor: 4.272

Review 5.  C. elegans dosage compensation: a window into mechanisms of domain-scale gene regulation.

Authors:  Sevinc Ercan; Jason D Lieb
Journal:  Chromosome Res       Date:  2009       Impact factor: 5.239

Review 6.  Genomic imprinting in mammals.

Authors:  Denise P Barlow; Marisa S Bartolomei
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-02-01       Impact factor: 10.005

7.  H3K36 methylation antagonizes PRC2-mediated H3K27 methylation.

Authors:  Wen Yuan; Mo Xu; Chang Huang; Nan Liu; She Chen; Bing Zhu
Journal:  J Biol Chem       Date:  2011-01-14       Impact factor: 5.157

8.  The C. elegans dosage compensation complex propagates dynamically and independently of X chromosome sequence.

Authors:  Sevinç Ercan; Lindsay L Dick; Jason D Lieb
Journal:  Curr Biol       Date:  2009-10-22       Impact factor: 10.834

9.  Trans-generational epigenetic regulation of C. elegans primordial germ cells.

Authors:  Hirofumi Furuhashi; Teruaki Takasaki; Andreas Rechtsteiner; Tengguo Li; Hiroshi Kimura; Paula M Checchi; Susan Strome; William G Kelly
Journal:  Epigenetics Chromatin       Date:  2010-08-12       Impact factor: 4.954

10.  Chromosome-biased binding and gene regulation by the Caenorhabditis elegans DRM complex.

Authors:  Tomoko M Tabuchi; Bart Deplancke; Naoki Osato; Lihua J Zhu; M Inmaculada Barrasa; Melissa M Harrison; H Robert Horvitz; Albertha J M Walhout; Kirsten A Hagstrom
Journal:  PLoS Genet       Date:  2011-05-12       Impact factor: 5.917

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  29 in total

Review 1.  Dosage compensation in Drosophila.

Authors:  John C Lucchesi; Mitzi I Kuroda
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-05-01       Impact factor: 10.005

Review 2.  Repression of somatic cell fate in the germline.

Authors:  Valérie J Robert; Steve Garvis; Francesca Palladino
Journal:  Cell Mol Life Sci       Date:  2015-06-05       Impact factor: 9.261

Review 3.  Transcriptional silencing by polycomb-group proteins.

Authors:  Ueli Grossniklaus; Renato Paro
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-11-03       Impact factor: 10.005

Review 4.  Dosage compensation in mammals.

Authors:  Neil Brockdorff; Bryan M Turner
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-03-02       Impact factor: 10.005

5.  Gene repression. H3K27me and PRC2 transmit a memory of repression across generations and during development.

Authors:  Laura J Gaydos; Wenchao Wang; Susan Strome
Journal:  Science       Date:  2014-09-18       Impact factor: 47.728

Review 6.  Specifying and protecting germ cell fate.

Authors:  Susan Strome; Dustin Updike
Journal:  Nat Rev Mol Cell Biol       Date:  2015-07       Impact factor: 94.444

7.  Chromosome-wide mechanisms to decouple gene expression from gene dose during sex-chromosome evolution.

Authors:  Bayly S Wheeler; Erika Anderson; Christian Frøkjær-Jensen; Qian Bian; Erik Jorgensen; Barbara J Meyer
Journal:  Elife       Date:  2016-08-30       Impact factor: 8.140

8.  Dynamic Control of X Chromosome Conformation and Repression by a Histone H4K20 Demethylase.

Authors:  Katjuša Brejc; Qian Bian; Satoru Uzawa; Bayly S Wheeler; Erika C Anderson; David S King; Philip J Kranzusch; Christine G Preston; Barbara J Meyer
Journal:  Cell       Date:  2017-08-31       Impact factor: 41.582

Review 9.  RNAi and heterochromatin assembly.

Authors:  Robert Martienssen; Danesh Moazed
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-08-03       Impact factor: 10.005

10.  Status of dosage compensation of X chromosome in bovine genome.

Authors:  Sojeong Ka; Hyeonju Ahn; Minseok Seo; Heebal Kim; Jin Nam Kim; Hyun-Jeong Lee
Journal:  Genetica       Date:  2016-07-04       Impact factor: 1.082

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