| Literature DB >> 24587761 |
Khalil Salem A M Shweshein1, Filip Andrić1, Aleksandra Radoičić1, Matija Zlatar2, Maja Gruden-Pavlović1, Zivoslav Tešić1, Dušanka Milojković-Opsenica1.
Abstract
The lipophilicity of ten ruthenium(II)-arene complexes was assessed by reversed-phase thin-layer chromatography (RP-TLC) on octadecyl silica stationary phase. The binary solvent systems composed of water and acetonitrile were used as mobile phase in order to determine chromatographic descriptors for lipophilicity estimation. Octanol-water partition coefficient, logK(OW), of tested complexes was experimentally determined using twenty-eight standard solutes which were analyzed under the same chromatographic conditions as target substances. In addition, ab initio density functional theory (DFT) computational approach was employed to calculate logK(OW) values from the differences in Gibbs' free solvation energies of the solute transfer from n-octanol to water. A good overall agreement between DFT calculated and experimentally determined logK(OW) values was established (R(2) = 0.8024-0.9658).Entities:
Mesh:
Substances:
Year: 2014 PMID: 24587761 PMCID: PMC3919081 DOI: 10.1155/2014/862796
Source DB: PubMed Journal: ScientificWorldJournal ISSN: 1537-744X
Figure 1Structures of studied ruthenium(II)-arene complexes.
Calibration set of standard compounds with experimentally determined logK OW values.
| No. | Compound | log |
p |
|
|---|---|---|---|---|
| 1 | 1,2,3-Benzotriazole | 1.44 | 8.37 | 0.42 |
| 2 | 4-Chlorobenzoic acid | 2.65 | 3.98 | 99.05 |
| 3 | 2-Nitrobenzaldehyde | 1.74 | — | — |
| 4 | 4-Bromoaniline* | 2.26 | 3.86 | 99.28* |
| 5 | Phenol | 1.46 | 10.09 | 0.01 |
| 6 | Benzophenone | 3.18 | — | — |
| 7 | 3-Nitrobenzaldehyde | 1.46 | — | — |
| 8 | 4-Aminobenzoic acid | 0.83 | 4.65 | 95.72 |
| 9 | Phthalimide* | 1.15 | 100.00* | |
| 10 | 1,4-Benzoquinone | 0.20 | — | — |
| 11 | 4-Nitrophenol | 1.91 | 7.15 | 6.61 |
| 12 | 3-Nitrophenol | 2.00 | 8.28 | 0.52 |
| 13 | Benzyl alcohol | 1.10 | — | — |
| 14 | Naphthylamine* | 2.25 | 3.92 | 99.18* |
| 15 | 2-Naphthol | 2.85 | 9.67 | 0.02 |
| 16 | 4-Fluoroaniline* | 1.15 | 4.70 | 95.23* |
| 17 | 1-Naphthol | 2.85 | 9.34 | 0.05 |
| 18 | 4-Hydroxybenzaldehyde | 1.35 | — | — |
| 19 | 3-Chloronitrobenzene | 2.46 | — | — |
| 20 | 2,4-Dichlorophenol | 3.06 | 7.85 | 1.39 |
| 21 | 4-Methylphenol | 1.94 | 10.09 | 0.01 |
| 22 | 4-Chlorophenol | 2.39 | 9.38 | 0.04 |
| 23 | Anthracene | 4.45 | — | — |
| 24 | Acetophenone | 1.58 | — | — |
| 25 | 2-Aminophenol | 0.62 | 9.44 | 0.04 |
| 26 | 4-t-Butylphenol | 3.31 | 10.31 | 0.00 |
| 27 | 1,3,5-Trihydroxybenzene | 0.16 | 9.40 | 0.04 |
| 28 | 2,6-Dimethylphenol | 2.36 | 10.59 | 0.00 |
*Calculated to the corresponding protonated conjugated acid.
Retention of standard compounds and studied ruthenium complexes given as R values.
| Number | Compound | Volume fraction of acetonitrile (%) | ||||||
|---|---|---|---|---|---|---|---|---|
| 30 | 35 | 40 | 45 | 50 | 55 | 60 | ||
| 1 | 1,2,3-Benzotriazole | — | — | 0.31 | 0.39 | 0.48 | 0.51 | 0.53 |
| 2 | 4-Chlorobenzoic acid | — | — | 0.13 | 0.16 | 0.22 | 0.24 | 0.38 |
| 3 | 2-Nitrobenzaldehyde | — | — | 0.11 | 0.14 | 0.21 | 0.24 | 0.30 |
| 4 | 4-Bromoaniline | — | — | 0.06 | 0.08 | 0.15 | 0.18 | 0.25 |
| 5 | Phenol | — | — | 0.26 | 0.33 | 0.40 | 0.50 | 0.57 |
| 6 | Benzophenone | — | — | 0.03 | 0.05 | 0.07 | 0.09 | 0.15 |
| 7 | 3-Nitrobenzaldehyde | — | — | 0.11 | 0.14 | 0.23 | 0.24 | 0.30 |
| 8 | 4-Aminobenzoic acid | — | — | 0.44 | 0.48 | 0.54 | 0.56 | 0.60 |
| 9 | Phthalimide | — | — | 0.24 | 0.30 | 0.41 | 0.43 | 0.48 |
| 10 | 1,4-Benzoquinone | — | — | 0.40 | 0.43 | 0.49 | 0.50 | 0.52 |
| 11 | 4-Nitrophenol | — | — | 0.24 | 0.28 | 0.33 | 0.46 | 0.52 |
| 12 | 3-Nitrophenol | — | — | 0.16 | 0.20 | 0.27 | 0.41 | 0.49 |
| 13 | Benzyl alcohol | — | — | 0.42 | 0.50 | 0.53 | 0.59 | 0.64 |
| 14 | Naphthylamine | — | — | 0.12 | 0.16 | 0.22 | 0.33 | 0.41 |
| 15 | 2-Naphthol | — | — | 0.13 | 0.18 | 0.27 | 0.37 | 0.43 |
| 16 | 4-Fluoroaniline | — | — | 0.26 | 0.28 | 0.36 | 0.48 | 0.52 |
| 17 | 1-Naphthol | — | — | 0.12 | 0.13 | 0.19 | 0.33 | 0.39 |
| 18 | 4-Hydroxybenzaldehyde | — | — | 0.41 | 0.39 | 0.48 | 0.61 | 0.63 |
| 19 | 3-Chloronitrobenzene | — | — | 0.07 | 0.09 | 0.11 | 0.22 | 0.28 |
| 20 | 2,4-Dichlorophenol | — | — | 0.09 | 0.12 | 0.27 | 0.33 | 0.40 |
| 21 | 4-Methylphenol | — | — | 0.26 | 0.30 | 0.36 | 0.48 | 0.54 |
| 22 | 4-Chlorophenol | — | — | 0.17 | 0.24 | 0.30 | 0.39 | 0.51 |
| 23 | Anthracene | — | — | 0.01 | 0.02 | 0.02 | 0.09 | 0.15 |
| 24 | Acetophenone | — | — | 0.23 | 0.26 | 0.31 | 0.41 | 0.51 |
| 25 | 2-Aminophenol | — | — | 0.42 | 0.42 | 0.51 | 0.62 | 0.66 |
| 26 | 4-t-Butylphenol | — | — | 0.07 | 0.09 | 0.16 | 0.28 | 0.39 |
| 27 | 1,3,5-Trihydroxybenzene | — | — | 0.73 | 0.67 | 0.77 | 0.80 | 0.84 |
| 28 | 2,6-Dimethylphenol | — | — | 0.11 | 0.16 | 0.23 | 0.33 | 0.41 |
| 29 | Ru-1 | 0.01 | 0.01 | 0.02 | 0.04 | 0.06 | 0.11 | — |
| 30 | Ru-2 | 0.00 | 0.01 | 0.02 | 0.04 | 0.06 | 0.12 | — |
| 31 | Ru-3 | 0.01 | 0.01 | 0.02 | 0.04 | 0.06 | 0.15 | — |
| 32 | Ru-4 | 0.01 | 0.02 | 0.05 | 0.07 | 0.10 | 0.14 | — |
| 33 | Ru-5 | 0.01 | 0.03 | 0.06 | 0.08 | 0.13 | 0.16 | — |
| 34 | Ru-6 | 0.08 | 0.13 | 0.19 | 0.24 | 0.31 | 0.37 | — |
| 35 | Ru-7 | 0.23 | 0.28 | 0.32 | 0.37 | 0.44 | 0.49 | — |
| 36 | Ru-8 | 0.11 | 0.15 | 0.23 | 0.27 | 0.33 | 0.45 | — |
| 37 | Ru-9 | 0.05 | 0.07 | 0.13 | 0.16 | 0.21 | 0.29 | — |
| 38 | Ru-10 | 0.02 | 0.04 | 0.07 | 0.11 | 0.19 | 0.24 | — |
Linear relationship between solute retention (R ) and organic modifier volume fraction (φ). Accompanied statistics (R: Pearson's correlation coefficient, F: Fisher's parameter, S.D.: model standard deviation, n: number of calibration points) with values of intercept (R 0) and slope (−b).
| Compound | Chromatographic parameters | |||||
|---|---|---|---|---|---|---|
|
| − |
| S.D. |
|
| |
| 1,2,3-Benzotriazole | 1.13 ± 0.16 | 2.05 ± 0.32 | 0.9642 | 0.052 | 39.65 | 5 |
| 4-Chlorobenzoic acid | 1.98 ± 0.18 | 2.83 ± 0.36 | 0.9770 | 0.056 | 62.92 | 5 |
| 2-Nitrobenzaldehyde | 1.99 ± 0.11 | 2.73 ± 0.22 | 0.9901 | 0.035 | 149.91 | 5 |
| 4-Bromoaniline | 2.74 ± 0.19 | 3.81 ± 0.38 | 0.9858 | 0.059 | 103.48 | 5 |
| Phenol | 1.64 ± 0.05 | 2.94 ± 0.11 | 0.9981 | 0.017 | 768.73 | 5 |
| Benzophenone | 2.86 ± 0.11 | 3.42 ± 0.23 | 0.9935 | 0.036 | 229.29 | 5 |
| 3-Nitrobenzaldehyde | 1.98 ± 0.20 | 2.73 ± 0.39 | 0.9707 | 0.062 | 48.96 | 5 |
| 4-Aminobenzoic acid | 0.65 ± 0.07 | 1.38 ± 0.14 | 0.9848 | 0.022 | 96.39 | 5 |
| Phthalimide | 1.40 ± 0.18 | 2.32 ± 0.35 | 0.9671 | 0.056 | 43.29 | 5 |
| 1,4-Benzoquinone | 0.61 ± 0.08 | 1.10 ± 0.15 | 0.9723 | 0.024 | 51.88 | 5 |
| 4-Nitrophenol | 1.66 ± 0.13 | 2.83 ± 0.25 | 0.9886 | 0.039 | 129.19 | 5 |
| 3-Nitrophenol | 2.22 ± 0.15 | 3.67 ± 0.30 | 0.9900 | 0.048 | 147.99 | 5 |
| Benzyl alcohol | 0.87 ± 0.07 | 1.86 ± 0.13 | 0.9924 | 0.021 | 195.84 | 5 |
| Naphthylamine | 2.40 ± 0.08 | 3.75 ± 0.15 | 0.9976 | 0.024 | 612.44 | 5 |
| 2-Naphthol | 2.30 ± 0.10 | 3.70 ± 0.21 | 0.9954 | 0.033 | 323.64 | 5 |
| 4-Fluoroaniline | 1.56 ± 0.16 | 2.68 ± 0.32 | 0.9789 | 0.051 | 68.73 | 5 |
| 1-Naphthol | 2.44 ± 0.23 | 3.75 ± 0.46 | 0.9785 | 0.072 | 67.56 | 5 |
| 4-Hydroxybenzaldehyde | 1.16 ± 0.25 | 2.33 ± 0.49 | 0.9396 | 0.078 | 22.59 | 5 |
| 3-Chloronitrobenzene | 2.67 ± 0.25 | 3.75 ± 0.50 | 0.9747 | 0.078 | 57.07 | 5 |
| 2,4-Dichlorophenol | 2.73 ± 0.30 | 4.35 ± 0.60 | 0.9728 | 0.095 | 52.89 | 5 |
| 4-Methylphenol | 1.61 ± 0.10 | 2.80 ± 0.194 | 0.9928 | 0.031 | 207.53 | 5 |
| 4-Chlorophenol | 2.10 ± 0.08 | 3.49 ± 0.16 | 0.9969 | 0.025 | 487.62 | 5 |
| Anthracene | 4.37 ± 0.50 | 5.96 ± 0.98 | 0.9616 | 0.155 | 36.87 | 5 |
| Acetophenone | 1.66 ± 0.15 | 2.75 ± 0.29 | 0.9836 | 0.046 | 89.03 | 5 |
| 2-Aminophenol | 1.15 ± 0.19 | 2.37 ± 0.37 | 0.9657 | 0.059 | 41.45 | 5 |
| 4-t-Butylphenol | 3.16 ± 0.17 | 4.93 ± 0.35 | 0.9927 | 0.055 | 204.43 | 5 |
| 1,3,5-Trihydroxybenzene | 0.38 ± 0.29 | 1.79 ± 0.57 | 0.8754 | 0.090 | 9.84 | 5 |
| 2,6-Dimethylphenol | 2.41 ± 0.06 | 3.77 ± 0.13 | 0.9984 | 0.020 | 908.70 | 5 |
| Ru-1 | 3.90 ± 0.32 | 5.45 ± 0.74 | 0.7903 | 0.155 | 6.65 | 6 |
| Ru-2 | 3.97 ± 0.22 | 5.71 ± 0.51 | 0.8797 | 0.106 | 13.69 | 6 |
| Ru-3 | 3.96 ± 0.16 | 5.75 ± 0.38 | 0.8263 | 0.079 | 8.61 | 6 |
| Ru-4 | 3.24 ± 0.32 | 4.56 ± 0.74 | 0.9351 | 0.154 | 27.86 | 6 |
| Ru-5 | 3.20 ± 0.30 | 4.69 ± 0.69 | 0.8732 | 0.145 | 12.84 | 6 |
| Ru-6 | 1.97 ± 0.08 | 3.24 ± 0.18 | 0.9564 | 0.037 | 42.93 | 6 |
| Ru-7 | 1.13 ± 0.08 | 2.02 ± 0.19 | 0.9875 | 0.039 | 157.10 | 6 |
| Ru-8 | 1.88 ± 0.14 | 3.22 ± 0.31 | 0.9563 | 0.066 | 42.81 | 6 |
| Ru-9 | 2.35 ± 0.17 | 3.58 ± 0.40 | 0.9010 | 0.084 | 17.25 | 6 |
| Ru-10 | 3.04 ± 0.14 | 4.73 ± 0.31 | 0.9824 | 0.066 | 110.36 | 6 |
Calibration models and accompanying statistics.
| Model number | Model type | Equation | Statistics |
|---|---|---|---|
| 1 | OLS |
|
|
| 2 | OLS |
|
|
| 3 | OLS |
|
|
| 4 | OLS |
|
|
| 5 | OLS |
|
|
| 6 | OLS |
|
|
| 7 | PCR | log | RMSEC = 0.375; |
| RMSECV= 0.418; |
Selected average bond lengths (Å) and valence angles (°) for available crystallographic data (a) and comparison with DFT energy-minimized structures (b).
| Comp. | Bond lengths (Å) | Valence angles (°) | ||||||
|---|---|---|---|---|---|---|---|---|
| M–C | M–Cl | M–N | M–O | O–M–N | O–M–Cl | N–M–Cl | Cl–M–Cl | |
| Ru-1 | ||||||||
| a | 2.18 | 2.40 | 2.13 | — | — | — | 86.0 | 87.0 |
| b | 2.19 | 2.37 | 2.05 | — | — | — | 84.8 | 88.7 |
| Ru-7 | ||||||||
| a | 2.18 | 2.41 | 2.10 | 2.10 | 77.9 | 86.7 | 85.3 | — |
| b | 2.19 | 2.37 | 2.03 | 2.04 | 78.8 | 88.6 | 81.9 | — |
| Ru-9 | ||||||||
| a | 2.19 | 2.40 | 2.16 | 2.09 | 76.9 | 83.7 | 85.2 | — |
| b | 2.18 | 2.37 | 2.04 | 2.03 | 79.1 | 86.6 | 82.8 | — |
| Ru-10 | ||||||||
| a | 2.19 | 2.42 | 2.10 | 2.09 | 78.0 | 85.2 | 85.2 | — |
| b | 2.18 | 2.37 | 2.04 | 2.03 | 79.1 | 86.6 | 82.8 | — |
Chromatographically determined and computationally estimated logK OW values of studied ruthenium complexes.
| Comp. | Chromatographically determined | Estimated | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Model number | Based on | |||||||||
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | Δ | Δ | log | |
| Ru-1 | 4.26 ± 0.37 | 4.03 ± 0.38 | 4.19 ± 0.42 | 4.31 ± 0.56 | 4.31 ± 0.28 | 4.38 ± 0.34 | 3.72 | −13.85 | −19.81 | 4.36 |
| Ru-2 | 4.13 ± 0.37 | 3.91 ± 0.37 | 4.09 ± 0.41 | 4.13 ± 0.55 | 4.39 ± 0.28 | 4.63 ± 0.35 | 3.65 | −13.27 | −19.35 | 4.45 |
| Ru-3 | 4.13 ± 0.37 | 3.91 ± 0.37 | 4.09 ± 0.41 | 3.74 ± 0.52 | 4.38 ± 0.28 | 4.68 ± 0.36 | 3.97 | −9.99 | −17.63 | 5.59 |
| Ru-4 | 3.42 ± 0.33 | 3.43 ± 0.35 | 3.50 ± 0.38 | 3.86 ± 0.52 | 3.52 ± 0.25 | 3.47 ± 0.30 | 2.91 | −14.48 | −19.60 | 3.75 |
| Ru-5 | 3.18 ± 0.32 | 3.24 ± 0.34 | 3.08 ± 0.36 | 3.63 ± 0.51 | 3.47 ± 0.24 | 3.59 ± 0.30 | 2.63 | −14.99 | −19.97 | 3.65 |
| Ru-6 | 1.81 ± 0.30 | 1.72 ± 0.32 | 1.81 ± 0.34 | 1.99 ± 0.45 | 2.00 ± 0.22 | 2.11 ± 0.27 | 1.63 | −20.77 | −23.24 | 1.81 |
| Ru-7 | 1.15 ± 0.31 | 1.07 ± 0.33 | 1.15 ± 0.35 | 1.24 ± 0.46 | 0.98 ± 0.23 | 0.87 ± 0.28 | 1.14 | −20.51 | −22.57 | 1.50 |
| Ru-8 | 1.61 ± 0.30 | 1.59 ± 0.32 | 1.68 ± 0.34 | 1.49 ± 0.45 | 1.88 ± 0.22 | 2.09 ± 0.27 | 1.78 | −19.35 | −21.61 | 1.66 |
| Ru-9 | 2.33 ± 0.30 | 2.36 ± 0.32 | 2.39 ± 0.34 | 2.55 ± 0.46 | 2.44 ± 0.22 | 2.46 ± 0.27 | 2.14 | −16.88 | −19.70 | 2.06 |
| Ru-10 | 2.99 ± 0.32 | 2.80 ± 0.33 | 2.56 ± 0.34 | 2.87 ± 0.47 | 3.27 ± 0.24 | 3.63 ± 0.31 | 2.59 | −15.64 | −19.15 | 2.57 |