| Literature DB >> 24586568 |
Amy M Ahasic1, Yang Zhao2, Li Su3, Chau-Chyun Sheu4, B Taylor Thompson5, David C Christiani6.
Abstract
RATIONALE: Adiponectin is an anti-inflammatory adipokine that is the most abundant gene product of adipose tissue. Lower levels have been observed in obesity, insulin resistance, and in critical illness. However, elevated levels early in acute respiratory failure have been associated with mortality. Polymorphisms in adiponectin-related genes (ADIPOQ, ADIPOR1, ADIPOR2) have been examined for relationships with obesity, insulin resistance and diabetes, cardiovascular disease, and to circulating adipokine levels, but many gaps in knowledge remain. The current study aims to assess the association between potentially functional polymorphisms in adiponectin-related genes with acute respiratory distress syndrome (ARDS) risk and mortality.Entities:
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Year: 2014 PMID: 24586568 PMCID: PMC3929660 DOI: 10.1371/journal.pone.0089170
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Selected Adiponectin and Receptor SNPs and Genotype Frequencies in the Total Cohort.
| Genotype, N (%) | ||||||
| Gene | Polymorphism | Location | AA | AB | BB | MAF |
|
| rs266729 | Promoter | 1151 (56) | 790 (38) | 120 (6) | 25.0% |
|
| rs822387 | 5′ of Promoter | 1699 (82) | 349 (17) | 17 (1) | 9.3% |
|
| rs864265 | 5′ of Promoter | 1531 (74) | 496 (24) | 40 (2) | 13.3% |
|
| rs2082940 | 3′ UTR | 1562 (76) | 453 (22) | 49 (2) | 13.4% |
|
| rs16861194 | Promoter | 1738 (84) | 496 (24) | 40 (2) | 8.3% |
|
| rs7539542 | 3′ UTR | 929 (45) | 914 (44) | 224 (11) | 32.9% |
|
| rs1029629 | 5′ of Promoter | 999 (48) | 865 (42) | 203 (10) | 30.7% |
|
| rs1044471 | 3′ UTR | 536 (26) | 1076 (52) | 455 (22) | 48.1% |
|
| rs16928751 | Coding exon | 1626 (79) | 409 (20) | 30 (1) | 11.4% |
*A denotes major allele; B denotes minor allele;
**MAF = minor allele frequency.
Baseline Cohort Characteristics.
| Total Cohort (n = 2067) | Controls (n = 1500) | Cases (n = 567) |
| |
| Age, mean ± SD | 61.5±17.4 | 62.5±17.1 | 58.8±18.0 | <0.0001 |
| Female gender, n (%) | 785 (38) | 577 (38) | 208 (37) | 0.46 |
| BMI, median (IQR) | 26.5 (8.0) | 26.4 (7.8) | 27.4 (9.0) | 0.017 |
| APACHE III score, mean ± SD | 60.4±21.5 | 58.7±20.9 | 65.3±22.2 | <0.0001 |
| Sepsis syndrome, n (%) | 644 (31) | 510 (34) | 134 (24) | <0.0001 |
| Pulmonary source | 363 (56) | 260 (51) | 103 (77) | |
| Septic shock, n (%) | 1035 (50) | 672 (45) | 363 (64) | <0.0001 |
| Pulmonary source | 561 (54) | 302 (45) | 259 (71) | |
| Trauma, n (%) | 174 (8) | 130 (9) | 44 (8) | 0.51 |
| Massive transfusion, n (%) | 215 (10) | 161 (11) | 54 (10) | 0.42 |
| Aspiration, n (%) | 143 (7) | 95 (6) | 48 (9) | 0.09 |
| Direct pulmonary injury, n (%) | 1153 (56) | 730 (49) | 423 (75) | <0.0001 |
*P-value reflects comparison between cases and controls.
SD = standard deviation; IQR = interquartile range; NS = not significant.
Cohort Characteristics of ARDS Cases by Mortality.
| Survivors (n = 355) | Nonsurvivors (n = 212) |
| |
| Age, mean ± SD | 54.5±18.1 | 66.1±15.4 | <0.0001 |
| Female gender, n (%) | 124 (35) | 84 (40) | 0.26 |
| BMI, median (IQR) | 27.8 (9.7) | 26.1 (6.8) | 0.005 |
| APACHE III score, mean ± SD | 58.1±19.6 | 77.5±20.9 | <0.0001 |
| Sepsis syndrome, n (%) | 88 (25) | 46 (22) | 0.40 |
| Pulmonary source | 65 (74) | 38 (83) | |
| Septic shock, n (%) | 214 (60) | 149 (70) | 0.02 |
| Pulmonary source | 161 (75) | 98 (66) | |
| Trauma, n (%) | 41 (12) | 3 (1) | <0.0001 |
| Massive transfusion, n (%) | 35 (10) | 19 (9) | 0.72 |
| Aspiration, n (%) | 28 (8) | 20 (9) | 0.52 |
| Direct pulmonary injury, n (%) | 267 (75) | 156 (74) | 0.67 |
*P-value reflects comparison between survivors and nonsurvivors.
SD = standard deviation; IQR = interquartile range; NS = not significant.
Genotype Frequencies in ARDS Cases.
| ARDS Cases, N (%) | Survivors N (%) | Nonsurvivors N (%) | |||||||
| AA | AB | BB | AA | AB | BB | AA | AB | BB | |
| rs266729 | 312 (55) | 220 (39) | 33 (6) | 192 (54) | 138 (39) | 25 (7) | 120 (57) | 82 (39) | 8 (4) |
| rs822387 | 464 (82) | 99 (17) | 4 (1) | 292 (82) | 61 (17) | 2 (1) | 172 (81) | 38 (18) | 2 (1) |
| rs864265 | 422 (74) | 137 (24) | 8 (2) | 267 (75) | 81 (23) | 7 (2) | 155 (73) | 56 (26) | 1 (1) |
| rs2082940 | 435 (77) | 120 (21) | 11 (2) | 285 (80) | 69 (20) | 1 (<1) | 150 (71) | 51 (24) | 10 (5) |
| rs16861194 | 477 (84) | 88 (16) | 2 (<1) | 302 (85) | 51 (14) | 2 (1) | 175 (83) | 37 (17) | 0 (0) |
| rs7539542 | 247 (44) | 260 (46) | 60 (11) | 159 (45) | 161 (45) | 35 (10) | 88 (42) | 99 (47) | 25 (12) |
| rs1029629 | 252 (44) | 257 (45) | 58 (10) | 159 (45) | 157 (44) | 39 (11) | 93 (44) | 100 (47) | 19 (9) |
| rs1044471 | 157 (28) | 276 (49) | 134 (24) | 102 (29) | 167 (47) | 86 (24) | 55 (26) | 109 (51) | 48 (23) |
| rs16928751 | 463 (82) | 95 (17) | 9 (1) | 286 (80) | 66 (19) | 3 (1) | 177 (83) | 29 (14) | 6 (3) |
*A denotes major allele; B denotes minor allele.
Cox Proportional Hazards Models of Mortality by Genotype in ARDS Cases (n = 566).±
| Crude HR (95% CI) |
| Adjusted HR |
|
| |
|
| |||||
|
| 0.60 (0.30–1.21) | 0.16 | 0.71 (0.34–1.45) | 0.34 | 0.37 |
|
| 1.07 (0.27–4.30) | 0.93 | 1.95 (0.48–7.91) | 0.35 | 0.37 |
|
| 0.27 (0.038–1.92) | 0.19 | 0.23 (0.032–1.64) | 0.14 | 0.27 |
|
| 4.09 (2.16–7.74) | <0.0001 | 2.61 (1.36–5.00) | 0.004 | 0.02 |
|
| — | 0.97 | — | 0.98 | 0.68 |
|
| |||||
|
| 1.18 (0.78–1.79) | 0.44 | 1.46 (0.94–2.27) | 0.09 | 0.27 |
|
| |||||
|
| 0.87 (0.54–1.39) | 0.56 | 0.96 (0.59–1.57) | 0.87 | 0.68 |
|
| 0.98 (0.71–1.36) | 0.91 | 0.92 (0.66–1.29) | 0.64 | 0.57 |
|
| 2.12 (0.94–4.78) | 0.07 | 1.78 (0.77–4.09) | 0.17 | 0.27 |
Models shown represent recessive inheritance pattern.
*Also included in the model: age, BMI, APACHE, trauma, cirrhosis, diabetes.
**HR could not be calculated because only 0.7% of subjects genotyped at this locus had the homozygous variant genotype.
HR = hazard ratio; CI = confidence interval; FDR_q = false discovery rate q-value.
Figure 1Kaplan-Meier survival plot for rs2082940 among ARDS case patients.
All case patients were followed out to 60 days from enrollment. Note: 0 = non-homozygous variant genoypte; 1 = homozygous variant genotype.