Literature DB >> 2458567

Expression of the human amylase genes: recent origin of a salivary amylase promoter from an actin pseudogene.

L C Samuelson1, K Wiebauer, D L Gumucio, M H Meisler.   

Abstract

The human genes encoding salivary amylase (AMY1) and pancreatic amylase (AMY2) are nearly identical in structure and sequence. We have used ribonuclease protection studies to identify the functional gene copies in this multigene family. Riboprobes derived from each gene were hybridized to RNA from human pancreas, parotid and liver. The sizes of the protected fragments demonstrated that both pancreatic genes are expressed in pancreas. One of the pancreatic genes, AMY2B, is also transcribed at a low level in liver, but not from the promoter used in pancreas. AMY1 transcripts were detected in parotid, but not in pancreas or liver. Unexpected fragments protected by liver RNA led to the discovery that the 5' regions of the five human amylase genes contain a processed gamma-actin pseudogene. The promoter and start site for transcription of AMY1 are recently derived from the 3' untranslated region of gamma-actin. In addition, insertion of an endogenous retrovirus has interrupted the gamma-actin pseudogene in four of the five amylase genes.

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Year:  1988        PMID: 2458567      PMCID: PMC338557          DOI: 10.1093/nar/16.17.8261

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  21 in total

Review 1.  Structural arrangement and tissue-specific expression of the two murine alpha-amylase loci Amy-1 and Amy-2.

Authors:  U Schibler; P H Shaw; F Sierra; O Hagenbüchle; P K Wellauer; M Carneiro; R Walter
Journal:  Oxf Surv Eukaryot Genes       Date:  1986

2.  Concerted evolution of human amylase genes.

Authors:  D L Gumucio; K Wiebauer; R M Caldwell; L C Samuelson; M H Meisler
Journal:  Mol Cell Biol       Date:  1988-03       Impact factor: 4.272

3.  Human pancreatic amylase is encoded by two different genes.

Authors:  P C Groot; M J Bleeker; J C Pronk; F Arwert; W H Mager; R J Planta; A W Eriksson; R R Frants
Journal:  Nucleic Acids Res       Date:  1988-05-25       Impact factor: 16.971

4.  Ribonucleic acid isolated by cesium chloride centrifugation.

Authors:  V Glisin; R Crkvenjakov; C Byus
Journal:  Biochemistry       Date:  1974-06-04       Impact factor: 3.162

5.  The bidirectional transfer of DNA and RNA to nitrocellulose or diazobenzyloxymethyl-paper.

Authors:  G E Smith; M D Summers
Journal:  Anal Biochem       Date:  1980-11-15       Impact factor: 3.365

6.  Corrected sequences of cDNAs for human salivary and pancreatic alpha-amylases [corrected].

Authors:  T Nishide; M Emi; Y Nakamura; K Matsubara
Journal:  Gene       Date:  1984-05       Impact factor: 3.688

7.  Evidence of duplication of the human salivary amylase gene.

Authors:  J C Pronk; R R Frants; W Jansen; A W Eriksson; G J Tonino
Journal:  Hum Genet       Date:  1982       Impact factor: 4.132

8.  Primary structure of human pancreatic alpha-amylase gene: its comparison with human salivary alpha-amylase gene.

Authors:  A Horii; M Emi; N Tomita; T Nishide; M Ogawa; T Mori; K Matsubara
Journal:  Gene       Date:  1987       Impact factor: 3.688

9.  Chromosome I linkage studies in Charcot-Marie-Tooth neuropathy type I.

Authors:  L R Griffiths; M B Zwi; J G McLeod; G A Nicholson
Journal:  Am J Hum Genet       Date:  1988-05       Impact factor: 11.025

10.  Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease.

Authors:  J M Chirgwin; A E Przybyla; R J MacDonald; W J Rutter
Journal:  Biochemistry       Date:  1979-11-27       Impact factor: 3.162

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  17 in total

1.  Variation in gene copy number and polymorphism of the human salivary amylase isoenzyme system in Caucasians.

Authors:  R A Bank; E H Hettema; M A Muijs; G Pals; F Arwert; D I Boomsma; J C Pronk
Journal:  Hum Genet       Date:  1992-05       Impact factor: 4.132

2.  Retroviral and pseudogene insertion sites reveal the lineage of human salivary and pancreatic amylase genes from a single gene during primate evolution.

Authors:  L C Samuelson; K Wiebauer; C M Snow; M H Meisler
Journal:  Mol Cell Biol       Date:  1990-06       Impact factor: 4.272

3.  A cDNA sequence encoding cytoskeletal gamma-actin from rat.

Authors:  C W Brown; K M McHugh; J L Lessard
Journal:  Nucleic Acids Res       Date:  1990-09-11       Impact factor: 16.971

4.  A salivary amylase transgene is efficiently expressed in liver but not in parotid gland of transgenic mice.

Authors:  J M Jones; S A Keller; L C Samuelson; L Osborn; M P Rosenberg; M H Meisler
Journal:  Nucleic Acids Res       Date:  1989-08-25       Impact factor: 16.971

5.  Exome sequencing and arrayCGH detection of gene sequence and copy number variation between ILS and ISS mouse strains.

Authors:  Laura Dumas; C Michael Dickens; Nathan Anderson; Jonathan Davis; Beth Bennett; Richard A Radcliffe; James M Sikela
Journal:  Mamm Genome       Date:  2014-02-20       Impact factor: 2.957

6.  Isolation of the murine ribonuclease gene Rib-1: structure and tissue specific expression in pancreas and parotid gland.

Authors:  L C Samuelson; K Wiebauer; G Howard; R M Schmid; D Koeplin; M H Meisler
Journal:  Nucleic Acids Res       Date:  1991-12-25       Impact factor: 16.971

7.  Identification of novel retroid agents in Danio rerio, Oryzias latipes, Gasterosteus aculeatus and Tetraodon nigroviridis.

Authors:  Holly A Basta; Alex J Buzak; Marcella A McClure
Journal:  Evol Bioinform Online       Date:  2007-09-06       Impact factor: 1.625

Review 8.  Retrotransposons and the evolution of mammalian gene expression.

Authors:  D M Robins; L C Samuelson
Journal:  Genetica       Date:  1992       Impact factor: 1.082

9.  Amylase mRNA transcripts in normal tissues and neoplasms: the implication of different expressions of amylase isogenes.

Authors:  K Seyama; T Nukiwa; K Takahashi; H Takahashi; S Kira
Journal:  J Cancer Res Clin Oncol       Date:  1994       Impact factor: 4.553

10.  Amyrel, a paralogous gene of the amylase gene family in Drosophila melanogaster and the Sophophora subgenus.

Authors:  J L Da Lage; E Renard; F Chartois; F Lemeunier; M L Cariou
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-09       Impact factor: 11.205

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