Literature DB >> 24584239

Metabolic changes in Klebsiella oxytoca in response to low oxidoreduction potential, as revealed by comparative proteomic profiling integrated with flux balance analysis.

Yan Zhu1, Dan Li, Guanhui Bao, Shaohua Wang, Shaoming Mao, Jiangning Song, Yin Li, Yanping Zhang.   

Abstract

Oxidoreduction potential (ORP) is an important physiological parameter for biochemical production in anaerobic or microaerobic processes. However, the effect of ORP on cellular physiology remains largely unknown, which hampers the design of engineering strategies targeting proteins associated with ORP response. Here we characterized the effect of altering ORP in a 1,3-propanediol producer, Klebsiella oxytoca, by comparative proteomic profiling combined with flux balance analysis. Decreasing the extracellular ORP from -150 to -240 mV retarded cell growth and enhanced 1,3-propanediol production. Comparative proteomic analysis identified 61 differentially expressed proteins, mainly involved in carbohydrate catabolism, cellular constituent biosynthesis, and reductive stress response. A hypothetical oxidoreductase (HOR) that catalyzes 1,3-propanediol production was markedly upregulated, while proteins involved in biomass precursor synthesis were downregulated. As revealed by subsequent flux balance analysis, low ORP induced a metabolic shift from glycerol oxidation to reduction and rebalancing of redox and energy metabolism. From the integrated protein expression profiles and flux distributions, we can construct a rational analytic framework that elucidates how (facultative) anaerobes respond to extracellular ORP changes.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 24584239      PMCID: PMC3993281          DOI: 10.1128/AEM.03327-13

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  60 in total

1.  Controlling the oxidoreduction potential of the culture of Clostridium acetobutylicum leads to an earlier initiation of solventogenesis, thus increasing solvent productivity.

Authors:  Shaohua Wang; Yan Zhu; Yanping Zhang; Yin Li
Journal:  Appl Microbiol Biotechnol       Date:  2011-09-21       Impact factor: 4.813

2.  Detection and interpretation of redox potential optima in the catalytic activity of enzymes.

Authors:  Sean J Elliott; Christophe Léger; Harsh R Pershad; Judy Hirst; Kerensa Heffron; Nicolas Ginet; Francis Blasco; Richard A Rothery; Joel H Weiner; Fraser A Armstrong
Journal:  Biochim Biophys Acta       Date:  2002-09-10

3.  Anaerobic obligatory xylitol production in Escherichia coli strains devoid of native fermentation pathways.

Authors:  Olubolaji Akinterinwa; Patrick C Cirino
Journal:  Appl Environ Microbiol       Date:  2010-11-19       Impact factor: 4.792

4.  Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0.

Authors:  Jan Schellenberger; Richard Que; Ronan M T Fleming; Ines Thiele; Jeffrey D Orth; Adam M Feist; Daniel C Zielinski; Aarash Bordbar; Nathan E Lewis; Sorena Rahmanian; Joseph Kang; Daniel R Hyduke; Bernhard Ø Palsson
Journal:  Nat Protoc       Date:  2011-08-04       Impact factor: 13.491

5.  Enzymatic evidence for an involvement of pyruvate dehydrogenase in the anaerobic glycerol metabolism of Klebsiella pneumoniae.

Authors:  K Menzel; A P Zeng; W D Deckwer
Journal:  J Biotechnol       Date:  1997-08-11       Impact factor: 3.307

Review 6.  Stress responses in lactic acid bacteria.

Authors:  Maarten van de Guchte; Pascale Serror; Christian Chervaux; Tamara Smokvina; Stanislav D Ehrlich; Emmanuelle Maguin
Journal:  Antonie Van Leeuwenhoek       Date:  2002-08       Impact factor: 2.271

7.  Engineered Saccharomyces cerevisiae that produces 1,3-propanediol from D-glucose.

Authors:  Z Rao; Z Ma; W Shen; H Fang; J Zhuge; X Wang
Journal:  J Appl Microbiol       Date:  2008-12       Impact factor: 3.772

Review 8.  Anaerobic fermentation of glycerol: a path to economic viability for the biofuels industry.

Authors:  Syed Shams Yazdani; Ramon Gonzalez
Journal:  Curr Opin Biotechnol       Date:  2007-05-25       Impact factor: 9.740

9.  Structures of the thermophilic F1-ATPase epsilon subunit suggesting ATP-regulated arm motion of its C-terminal domain in F1.

Authors:  Hiromasa Yagi; Nobumoto Kajiwara; Hideaki Tanaka; Tomitake Tsukihara; Yasuyuki Kato-Yamada; Masasuke Yoshida; Hideo Akutsu
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-20       Impact factor: 11.205

10.  Regulation of the protein disulfide proteome by mitochondria in mammalian cells.

Authors:  Yi Yang; Yanli Song; Joseph Loscalzo
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-20       Impact factor: 11.205

View more
  3 in total

1.  Reduced catabolic protein expression in Clostridium butyricum DSM 10702 correlate with reduced 1,3-propanediol synthesis at high glycerol loading.

Authors:  Mine Gungormusler-Yilmaz; Dmitry Shamshurin; Marine Grigoryan; Marcel Taillefer; Victor Spicer; Oleg V Krokhin; Richard Sparling; David B Levin
Journal:  AMB Express       Date:  2014-08-30       Impact factor: 3.298

2.  Petunidin-Based Anthocyanin Relieves Oxygen Stress in Lactobacillus plantarum ST-III.

Authors:  Minghui Yan; Bing-Hua Wang; Xiaofei Fu; Min Gui; Guojiao Wang; Lei Zhao; Ruiying Li; Chunping You; Zhenmin Liu
Journal:  Front Microbiol       Date:  2020-07-07       Impact factor: 5.640

3.  Enforcing ATP hydrolysis enhanced anaerobic glycolysis and promoted solvent production in Clostridium acetobutylicum.

Authors:  Zongjie Dai; Yan Zhu; Hongjun Dong; Chunhua Zhao; Yanping Zhang; Yin Li
Journal:  Microb Cell Fact       Date:  2021-07-29       Impact factor: 5.328

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.