Literature DB >> 24574770

Accumulation of aberrant DNA methylation during colorectal cancer development.

Eiji Sakai1, Atsushi Nakajima1, Atsushi Kaneda1.   

Abstract

Despite the recent advances in the therapeutic modalities, colorectal cancer (CRC) remains to be one of the most common causes of cancer-related death. CRC arises through accumulation of multiple genetic and epigenetic alterations that transform normal colonic epithelium into adenocarcinomas. Among crucial roles of epigenetic alterations, gene silencing by aberrant DNA methylation of promoter regions is one of the most important epigenetic mechanisms. Recent comprehensive methylation analyses on genome-wide scale revealed that sporadic CRC can be classified into distinct epigenotypes. Each epigenotype cooperates with specific genetic alterations, suggesting that they represent different molecular carcinogenic pathways. Precursor lesions of CRC, such as conventional and serrated adenomas, already show similar methylation accumulation to CRC, and can therefore be classified into those epigenotypes of CRC. In addition, specific DNA methylation already occurs in the normal colonic mucosa, which might be utilized for prediction of the personal CRC risk. DNA methylation is suggested to occur at an earlier stage than carcinoma formation, and may predict the molecular basis for future development of CRC. Here, we review DNA methylation and CRC classification, and discuss the possible clinical usefulness of DNA methylation as biomarkers for the diagnosis, prediction of the prognosis and the response to therapy of CRC.

Entities:  

Keywords:  Aberrant crypt foci; Colorectal adenoma; Colorectal cancer; Colorectal carcinogenesis; DNA methylation; Epigenotype; Genetic mutation

Mesh:

Substances:

Year:  2014        PMID: 24574770      PMCID: PMC3921549          DOI: 10.3748/wjg.v20.i4.978

Source DB:  PubMed          Journal:  World J Gastroenterol        ISSN: 1007-9327            Impact factor:   5.742


  101 in total

1.  Laterally spreading type of colorectal adenoma exhibits a unique methylation phenotype and K-ras mutations.

Authors:  Sakiko Hiraoka; Jun Kato; Masashi Tatsukawa; Keita Harada; Hideyuki Fujita; Tamiya Morikawa; Hidenori Shiraha; Yasushi Shiratori
Journal:  Gastroenterology       Date:  2006-08       Impact factor: 22.682

Review 2.  Cancer treatment and survivorship statistics, 2012.

Authors:  Rebecca Siegel; Carol DeSantis; Katherine Virgo; Kevin Stein; Angela Mariotto; Tenbroeck Smith; Dexter Cooper; Ted Gansler; Catherine Lerro; Stacey Fedewa; Chunchieh Lin; Corinne Leach; Rachel Spillers Cannady; Hyunsoon Cho; Steve Scoppa; Mark Hachey; Rebecca Kirch; Ahmedin Jemal; Elizabeth Ward
Journal:  CA Cancer J Clin       Date:  2012-06-14       Impact factor: 508.702

3.  Genome-scale analysis of aberrant DNA methylation in colorectal cancer.

Authors:  Toshinori Hinoue; Daniel J Weisenberger; Christopher P E Lange; Hui Shen; Hyang-Min Byun; David Van Den Berg; Simeen Malik; Fei Pan; Houtan Noushmehr; Cornelis M van Dijk; Rob A E M Tollenaar; Peter W Laird
Journal:  Genome Res       Date:  2011-06-09       Impact factor: 9.043

4.  Serrated lesions of the colorectum: review and recommendations from an expert panel.

Authors:  Douglas K Rex; Dennis J Ahnen; John A Baron; Kenneth P Batts; Carol A Burke; Randall W Burt; John R Goldblum; José G Guillem; Charles J Kahi; Matthew F Kalady; Michael J O'Brien; Robert D Odze; Shuji Ogino; Susan Parry; Dale C Snover; Emina Emilia Torlakovic; Paul E Wise; Joanne Young; James Church
Journal:  Am J Gastroenterol       Date:  2012-06-19       Impact factor: 10.864

5.  Identification of differentially methylated sequences in colorectal cancer by methylated CpG island amplification.

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6.  DNA methylation biomarker candidates for early detection of colon cancer.

Authors:  Joo Mi Yi; Mashaal Dhir; Angela A Guzzetta; Christine A Iacobuzio-Donahue; Kyu Heo; Kwang Mo Yang; Hiromu Suzuki; Minoru Toyota; Hwan-Mook Kim; Nita Ahuja
Journal:  Tumour Biol       Date:  2012-01-12

7.  Comparison of microsatellite instability, CpG island methylation phenotype, BRAF and KRAS status in serrated polyps and traditional adenomas indicates separate pathways to distinct colorectal carcinoma end points.

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Journal:  Am J Surg Pathol       Date:  2006-12       Impact factor: 6.394

8.  CpG island methylator phenotype associates with low-degree chromosomal abnormalities in colorectal cancer.

Authors:  Yu-Wei Cheng; Hanna Pincas; Manny D Bacolod; Gunter Schemmann; Sarah F Giardina; Jianmin Huang; Sandra Barral; Kamran Idrees; Sajid A Khan; Zhaoshi Zeng; Shoshana Rosenberg; Daniel A Notterman; Jurg Ott; Philip Paty; Francis Barany
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Journal:  N Engl J Med       Date:  1994-07-28       Impact factor: 91.245

10.  Genome-scale DNA methylation mapping of clinical samples at single-nucleotide resolution.

Authors:  Hongcang Gu; Christoph Bock; Tarjei S Mikkelsen; Natalie Jäger; Zachary D Smith; Eleni Tomazou; Andreas Gnirke; Eric S Lander; Alexander Meissner
Journal:  Nat Methods       Date:  2010-01-10       Impact factor: 28.547

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  27 in total

Review 1.  Gut microbiome and colorectal adenomas.

Authors:  Santosh Dulal; Temitope O Keku
Journal:  Cancer J       Date:  2014 May-Jun       Impact factor: 3.360

2.  Significant association of EED promoter hypomethylation with colorectal cancer.

Authors:  Xiuru Ying; Ranran Pan; Jie Zhong; Boyi Wu; Yuting Jiang; Jieer Ying; Cong Zhou; Jie Dai; Shuangying Zhao; Yinan Shen; Wei Zhang; Shiwei Duan
Journal:  Oncol Lett       Date:  2019-06-04       Impact factor: 2.967

Review 3.  The gastrointestinal microbiota and colorectal cancer.

Authors:  Temitope O Keku; Santosh Dulal; April Deveaux; Biljana Jovov; Xuesong Han
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2014-12-24       Impact factor: 4.052

4.  Aberrant DNA methylation of acute myeloid leukemia and colorectal cancer in a Chinese pedigree with a MLL3 germline mutation.

Authors:  Fuhua Yang; Qiang Gong; Wentao Shi; Yunding Zou; Jingmin Shi; Fengjiang Wei; Qingrong Li; Jieping Chen; Wei-Dong Li
Journal:  Tumour Biol       Date:  2016-07-12

5.  Case-control study of candidate gene methylation and adenomatous polyp formation.

Authors:  M Alexander; J B Burch; S E Steck; C-F Chen; T G Hurley; P Cavicchia; N Shivappa; J Guess; H Zhang; S D Youngstedt; K E Creek; S Lloyd; K Jones; J R Hébert
Journal:  Int J Colorectal Dis       Date:  2016-10-22       Impact factor: 2.571

Review 6.  Colorectal cancer: epigenetic alterations and their clinical implications.

Authors:  Alberto Puccini; Martin D Berger; Madiha Naseem; Ryuma Tokunaga; Francesca Battaglin; Shu Cao; Diana L Hanna; Michelle McSkane; Shivani Soni; Wu Zhang; Heinz-Josef Lenz
Journal:  Biochim Biophys Acta Rev Cancer       Date:  2017-09-20       Impact factor: 10.680

7.  DNA methylation and miRNA expression in colon adenomas compared with matched normal colon mucosa and carcinomas.

Authors:  Mezgebe Gebrekiristos; Joshua Melson; Alice Jiang; Lela Buckingham
Journal:  Int J Exp Pathol       Date:  2022-02-28       Impact factor: 2.793

8.  Epigenetic and genetic dispositions of ovarian carcinomas.

Authors:  Ken Yamaguchi; Noriomi Matsumura; Masaki Mandai; Tsukasa Baba; Ikuo Konishi; Susan K Murphy
Journal:  Oncoscience       Date:  2014-09-22

9.  Caveolin-1 is down-regulated in alveolar rhabdomyosarcomas and negatively regulates tumor growth.

Authors:  Juan Huertas-Martínez; Santiago Rello-Varona; David Herrero-Martín; Ignasi Barrau; Silvia García-Monclús; Miguel Sáinz-Jaspeado; Laura Lagares-Tena; Yaiza Núñez-Álvarez; Silvia Mateo-Lozano; Jaume Mora; Josep Roma; Nuria Toran; Sebastian Moran; Roser López-Alemany; Soledad Gallego; Manel Esteller; Miguel A Peinado; Xavier García Del Muro; Oscar M Tirado
Journal:  Oncotarget       Date:  2014-10-30

10.  A methylation-driven gene panel predicts survival in patients with colon cancer.

Authors:  Yaojun Peng; Jing Zhao; Fan Yin; Gaowa Sharen; Qiyan Wu; Qi Chen; Xiaoxuan Sun; Juan Yang; Huan Wang; Dong Zhang
Journal:  FEBS Open Bio       Date:  2021-07-28       Impact factor: 2.693

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