Literature DB >> 24573163

Aridibacter famidurans gen. nov., sp. nov. and Aridibacter kavangonensis sp. nov., two novel members of subdivision 4 of the Acidobacteria isolated from semiarid savannah soil.

Katharina J Huber1, Pia K Wüst1, Manfred Rohde2, Jörg Overmann3,1, Bärbel U Foesel1.   

Abstract

Acidobacteria constitute an abundant fraction of the soil microbial community and are currently divided into 26 subdivisions. Most cultivated members of the Acidobacteria are affiliated with subdivision 1, while only a few representatives of subdivisions 3, 4, 8, 10 and 23 have been isolated and described so far. Two novel isolates of subdivision 4 of the Acidobacteria were isolated from subtropical savannah soils and are characterized in the present work. Cells of strains A22_HD_4H(T) and Ac_23_E3(T) were immotile rods that divided by binary fission. Colonies were pink and white, respectively. The novel strains A22_HD_4H(T) and Ac_23_E3(T) were aerobic mesophiles with a broad range of tolerance towards pH (4.0-9.5 and 3.5-10.0, respectively) and temperature (15-44 and 12-47 °C, respectively). Both showed chemo-organoheterotrophic growth on some sugars, the amino sugar N-acetylgalactosamine, a few amino acids, organic acids and various complex protein substrates. Major fatty acids of A22_HD_4H(T) and Ac_23_E3(T) were iso-C(15 : 0), summed feature 1 (C(13 : 0) 3-OH/iso-C(15 : 1) H), summed feature 3 (C(16 : 1)ω7c/C(16 : 1)ω6c) and anteiso-C(17 : 0). The major quinone was MK-8; in addition, MK-7 occurred in small amounts. The DNA G+C contents of A22_HD_4H(T) and Ac_23_E3(T) were 53.2 and 52.6 mol%, respectively. The closest described relative was Blastocatella fastidiosa A2-16(T), with 16S rRNA gene sequence identity of 93.2 and 93.3%, respectively. Strains A22_HD_4H(T) and Ac_23_E3(T) displayed 16S rRNA gene sequence similarity of 97.4% to each other. On the basis of the low DNA-DNA hybridization value, the two isolates represent different species. Based on morphological, physiological and molecular characteristics, the new genus Aridibacter gen. nov. is proposed, with two novel species, the type species Aridibacter famidurans sp. nov. (type strain A22_HD_4H(T) = DSM 26555(T) = LMG 27985(T)) and a second species, Aridibacter kavangonensis sp. nov. (type strain Ac_23_E3(T) = DSM 26558(T) = LMG 27597(T)).
© 2014 IUMS.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 24573163     DOI: 10.1099/ijs.0.060236-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  14 in total

1.  Ether- and ester-bound iso-diabolic acid and other lipids in members of acidobacteria subdivision 4.

Authors:  Jaap S Sinninghe Damsté; W Irene C Rijpstra; Ellen C Hopmans; Bärbel U Foesel; Pia K Wüst; Jörg Overmann; Marcus Tank; Donald A Bryant; Peter F Dunfield; Karen Houghton; Matthew B Stott
Journal:  Appl Environ Microbiol       Date:  2014-06-13       Impact factor: 4.792

2.  Soil Acidobacterial 16S rRNA Gene Sequences Reveal Subgroup Level Differences between Savanna-Like Cerrado and Atlantic Forest Brazilian Biomes.

Authors:  Elisa C P Catão; Fabyano A C Lopes; Janaína F Araújo; Alinne P de Castro; Cristine C Barreto; Mercedes M C Bustamante; Betania F Quirino; Ricardo H Krüger
Journal:  Int J Microbiol       Date:  2014-09-15

3.  Nutrient requirements and growth physiology of the photoheterotrophic Acidobacterium, Chloracidobacterium thermophilum.

Authors:  Marcus Tank; Donald A Bryant
Journal:  Front Microbiol       Date:  2015-03-27       Impact factor: 5.640

Review 4.  The Ecology of Acidobacteria: Moving beyond Genes and Genomes.

Authors:  Anna M Kielak; Cristine C Barreto; George A Kowalchuk; Johannes A van Veen; Eiko E Kuramae
Journal:  Front Microbiol       Date:  2016-05-31       Impact factor: 5.640

5.  The Effect of Root Exudate 7,4'-Dihydroxyflavone and Naringenin on Soil Bacterial Community Structure.

Authors:  Márton Szoboszlay; Alison White-Monsant; Luke A Moe
Journal:  PLoS One       Date:  2016-01-11       Impact factor: 3.240

6.  BacDive--The Bacterial Diversity Metadatabase in 2016.

Authors:  Carola Söhngen; Adam Podstawka; Boyke Bunk; Dorothea Gleim; Anna Vetcininova; Lorenz Christian Reimer; Christian Ebeling; Cezar Pendarovski; Jörg Overmann
Journal:  Nucleic Acids Res       Date:  2015-09-30       Impact factor: 16.971

7.  Pheno- and Genotyping of Hopanoid Production in Acidobacteria.

Authors:  Jaap S Sinninghe Damsté; W Irene C Rijpstra; Svetlana N Dedysh; Bärbel U Foesel; Laura Villanueva
Journal:  Front Microbiol       Date:  2017-06-08       Impact factor: 5.640

8.  Isolation and Characterization of Urease-Producing Soil Bacteria.

Authors:  Eshetu Mekonnen; Ameha Kebede; Asefa Nigussie; Gessese Kebede; Mesfin Tafesse
Journal:  Int J Microbiol       Date:  2021-07-09

9.  Complete genome sequence of the thermophilic Acidobacteria, Pyrinomonas methylaliphatogenes type strain K22(T).

Authors:  Kevin C Y Lee; Xochitl C Morgan; Jean F Power; Peter F Dunfield; Curtis Huttenhower; Matthew B Stott
Journal:  Stand Genomic Sci       Date:  2015-11-14

10.  Peatland Acidobacteria with a dissimilatory sulfur metabolism.

Authors:  Bela Hausmann; Claus Pelikan; Craig W Herbold; Stephan Köstlbacher; Mads Albertsen; Stephanie A Eichorst; Tijana Glavina Del Rio; Martin Huemer; Per H Nielsen; Thomas Rattei; Ulrich Stingl; Susannah G Tringe; Daniela Trojan; Cecilia Wentrup; Dagmar Woebken; Michael Pester; Alexander Loy
Journal:  ISME J       Date:  2018-02-23       Impact factor: 10.302

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.