| Literature DB >> 24551510 |
Dennis Kurzbach1, Daniel R Kattnig1, Nane Pfaffenberger2, Wolfgang Schärtl2, Dariush Hinderberger1.
Abstract
Entities:
Keywords: Monte Carlo simulations; dynamic light scattering; molecular dynamics; nanoscale electrostatics; self-assembly
Year: 2012 PMID: 24551510 PMCID: PMC3922591 DOI: 10.1002/open.201200025
Source DB: PubMed Journal: ChemistryOpen ISSN: 2191-1363 Impact factor: 2.911
Figure 1a) Molecular structure of 14+ (left) and 22−/32− (top right). b) A typical monoexponential fit of an autocorrelation function gained from DLS on 22−/14+ ionoids. c) Hydrodynamic radii of the 22−/14+ ionoids plotted against time, as derived from DLS measurements. t=0 days refers to the date of initial preparation. The upper and lower lines indicate error estimates derived from the fits of the autocorrelation functions.
Figure 2a) Snapshot after 2 ns of MD of the system 32−/14+ at 6:2 molar ratio. b) Pair correlation function of 32− molecules gained from MD simulation of the system 32−/14+ (6:2) summed up over different time intervals. The overall distance distribution is shown in orange (—). Note that over time, certain maxima in the distributions appear frequently, as indicated by the dashed lines. The black distribution depicts the distances gained from DEER on the same system (—). c) The Monte Carlo-derived radial distribution function for 32− calculated for two 14+ and six 32− molecules (—). The box size was 263 nm3. As can be seen, there are no distinct maxima in the distance distribution. Hence, the aggregation of 32− and 14+ is not based on Coulomb interaction and excluded volume effects alone. Solvent entropy may possibly contribute significantly to the generation of the ionoids, as the MD-derived distributions lead to reasonable agreements with the experimental data. The 14+–14+ distribution (—) reveals a long-range correlation at approximately 15 nm. For more details, see the Supporting Information.