Literature DB >> 24550482

Linking toxicity and adaptive responses across the transcriptome, proteome, and phenotype of Chlamydomonas reinhardtii exposed to silver.

Smitha Pillai1, Renata Behra, Holger Nestler, Marc J-F Suter, Laura Sigg, Kristin Schirmer.   

Abstract

Understanding mechanistic and cellular events underlying a toxicological outcome allows the prediction of impact of environmental stressors to organisms living in different habitats. A systems-based approach aids in characterizing molecular events, and thereby the cellular pathways that have been perturbed. However, mapping only adverse outcomes of a toxicant falls short of describing the stress or adaptive response that is mounted to maintain homeostasis on perturbations and may confer resistance to the toxic insult. Silver is a potential threat to aquatic organisms because of the increasing use of silver-based nanomaterials, which release free silver ions. The effects of silver were investigated at the transcriptome, proteome, and cellular levels of Chlamydomonas reinhardtii. The cells instigate a fast transcriptome and proteome response, including perturbations in copper transport system and detoxification mechanisms. Silver causes an initial toxic insult, which leads to a plummeting of ATP and photosynthesis and damage because of oxidative stress. In response, the cells mount a defense response to combat oxidative stress and to eliminate silver via efflux transporters. From the analysis of the perturbations of the cell's functions, we derived a detailed mechanistic understanding of temporal dynamics of toxicity and adaptive response pathways for C. reinhardtii exposed to silver.

Entities:  

Keywords:  adaptive pathway; adverse outcome pathway; algae; systems biology; toxicity response

Mesh:

Substances:

Year:  2014        PMID: 24550482      PMCID: PMC3948315          DOI: 10.1073/pnas.1319388111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  36 in total

Review 1.  Adverse outcome pathways: a conceptual framework to support ecotoxicology research and risk assessment.

Authors:  Gerald T Ankley; Richard S Bennett; Russell J Erickson; Dale J Hoff; Michael W Hornung; Rodney D Johnson; David R Mount; John W Nichols; Christine L Russom; Patricia K Schmieder; Jose A Serrrano; Joseph E Tietge; Daniel L Villeneuve
Journal:  Environ Toxicol Chem       Date:  2010-03       Impact factor: 3.742

2.  Carbonic anhydrase activity in Mytilus galloprovincialis digestive gland: sensitivity to heavy metal exposure.

Authors:  Roberto Caricato; Caricato Roberto; Maria Giulia Lionetto; Lionetto Maria Giulia; Francesco Dondero; Dondero Francesco; Aldo Viarengo; Viarengo Aldo; Trifone Schettino; Schettino Trifone
Journal:  Comp Biochem Physiol C Toxicol Pharmacol       Date:  2010-05-10       Impact factor: 3.228

3.  Prompt and easy activation by specific thioredoxins of calvin cycle enzymes of Arabidopsis thaliana associated in the GAPDH/CP12/PRK supramolecular complex.

Authors:  Lucia Marri; Mirko Zaffagnini; Valérie Collin; Emmanuelle Issakidis-Bourguet; Stéphane D Lemaire; Paolo Pupillo; Francesca Sparla; Myroslawa Miginiac-Maslow; Paolo Trost
Journal:  Mol Plant       Date:  2008-10-03       Impact factor: 13.164

4.  Chlamydomonas starchless mutant defective in ADP-glucose pyrophosphorylase hyper-accumulates triacylglycerol.

Authors:  Yantao Li; Danxiang Han; Guongrong Hu; David Dauvillee; Milton Sommerfeld; Steven Ball; Qiang Hu
Journal:  Metab Eng       Date:  2010-02-19       Impact factor: 9.783

5.  Global quantification of mammalian gene expression control.

Authors:  Björn Schwanhäusser; Dorothea Busse; Na Li; Gunnar Dittmar; Johannes Schuchhardt; Jana Wolf; Wei Chen; Matthias Selbach
Journal:  Nature       Date:  2011-05-19       Impact factor: 49.962

6.  Targeted proteomics for Chlamydomonas reinhardtii combined with rapid subcellular protein fractionation, metabolomics and metabolic flux analyses.

Authors:  Stefanie Wienkoop; Julia Weiss; Patrick May; Stefan Kempa; Susann Irgang; Luis Recuenco-Munoz; Matthias Pietzke; Thorsten Schwemmer; Jens Rupprecht; Volker Egelhofer; Wolfram Weckwerth
Journal:  Mol Biosyst       Date:  2010-03-31

7.  Changes in transcript abundance in Chlamydomonas reinhardtii following nitrogen deprivation predict diversion of metabolism.

Authors:  Rachel Miller; Guangxi Wu; Rahul R Deshpande; Astrid Vieler; Katrin Gärtner; Xiaobo Li; Eric R Moellering; Simone Zäuner; Adam J Cornish; Bensheng Liu; Blair Bullard; Barbara B Sears; Min-Hao Kuo; Eric L Hegg; Yair Shachar-Hill; Shin-Han Shiu; Christoph Benning
Journal:  Plant Physiol       Date:  2010-10-08       Impact factor: 8.340

Review 8.  Transcriptomics in ecotoxicology.

Authors:  Kristin Schirmer; Beat B Fischer; Danielle J Madureira; Smitha Pillai
Journal:  Anal Bioanal Chem       Date:  2010-04-06       Impact factor: 4.142

9.  Integrating omic technologies into aquatic ecological risk assessment and environmental monitoring: hurdles, achievements, and future outlook.

Authors:  Graham Van Aggelen; Gerald T Ankley; William S Baldwin; Daniel W Bearden; William H Benson; J Kevin Chipman; Tim W Collette; John A Craft; Nancy D Denslow; Michael R Embry; Francesco Falciani; Stephen G George; Caren C Helbing; Paul F Hoekstra; Taisen Iguchi; Yoshi Kagami; Ioanna Katsiadaki; Peter Kille; Li Liu; Peter G Lord; Terry McIntyre; Anne O'Neill; Heather Osachoff; Ed J Perkins; Eduarda M Santos; Rachel C Skirrow; Jason R Snape; Charles R Tyler; Don Versteeg; Mark R Viant; David C Volz; Tim D Williams; Lorraine Yu
Journal:  Environ Health Perspect       Date:  2010-01       Impact factor: 9.031

10.  ChlamyCyc: an integrative systems biology database and web-portal for Chlamydomonas reinhardtii.

Authors:  Patrick May; Jan-Ole Christian; Stefan Kempa; Dirk Walther
Journal:  BMC Genomics       Date:  2009-05-04       Impact factor: 3.969

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  39 in total

1.  Response of a phytoplanktonic assemblage to copper and zinc enrichment in microcosm.

Authors:  Lalit K Pandey; T Han; J P Gaur
Journal:  Ecotoxicology       Date:  2015-01-06       Impact factor: 2.823

Review 2.  Mass spectrometry-based proteomics for system-level characterization of biological responses to engineered nanomaterials.

Authors:  Tong Zhang; Matthew J Gaffrey; Brian D Thrall; Wei-Jun Qian
Journal:  Anal Bioanal Chem       Date:  2018-06-08       Impact factor: 4.142

3.  Chronic and pulse exposure effects of silver nanoparticles on natural lake phytoplankton and zooplankton.

Authors:  Jennifer L Vincent; Michael J Paterson; Beth C Norman; Evan P Gray; James F Ranville; Andrew B Scott; Paul C Frost; Marguerite A Xenopoulos
Journal:  Ecotoxicology       Date:  2017-02-23       Impact factor: 2.823

Review 4.  Heavy metal-induced stress in eukaryotic algae-mechanisms of heavy metal toxicity and tolerance with particular emphasis on oxidative stress in exposed cells and the role of antioxidant response.

Authors:  Beatrycze Nowicka
Journal:  Environ Sci Pollut Res Int       Date:  2022-01-10       Impact factor: 4.223

5.  Selenium-binding Protein 1 (SBD1): A stress response regulator in Chlamydomonas reinhardtii.

Authors:  Aikaterini Koletti; Irene Dervisi; Chrysanthi Kalloniati; Maria-Eleftheria Zografaki; Heinz Rennenberg; Andreas Roussis; Emmanouil Flemetakis
Journal:  Plant Physiol       Date:  2022-08-01       Impact factor: 8.005

6.  Biomarkers of nanomaterials hazard from multi-layer data.

Authors:  Vittorio Fortino; Pia Anneli Sofia Kinaret; Michele Fratello; Angela Serra; Laura Aliisa Saarimäki; Audrey Gallud; Govind Gupta; Gerard Vales; Manuel Correia; Omid Rasool; Jimmy Ytterberg; Marco Monopoli; Tiina Skoog; Peter Ritchie; Sergio Moya; Socorro Vázquez-Campos; Richard Handy; Roland Grafström; Lang Tran; Roman Zubarev; Riitta Lahesmaa; Kenneth Dawson; Katrin Loeschner; Erik Husfeldt Larsen; Fritz Krombach; Hannu Norppa; Juha Kere; Kai Savolainen; Harri Alenius; Bengt Fadeel; Dario Greco
Journal:  Nat Commun       Date:  2022-07-01       Impact factor: 17.694

7.  Sublethal concentrations of silver nanoparticles affect the mechanical stability of biofilms.

Authors:  Alexandra Y Grün; Jutta Meier; George Metreveli; Gabriele E Schaumann; Werner Manz
Journal:  Environ Sci Pollut Res Int       Date:  2016-09-20       Impact factor: 4.223

8.  Response of three biofilm-forming benthic microorganisms to Ag nanoparticles and Ag+: the diatom Nitzschia palea, the green alga Uronema confervicolum and the cyanobacteria Leptolyngbya sp.

Authors:  A G González; L Fernández-Rojo; J Leflaive; O S Pokrovsky; J-L Rols
Journal:  Environ Sci Pollut Res Int       Date:  2016-08-20       Impact factor: 4.223

9.  Nutrient removal by Chlorella vulgaris F1068 under cetyltrimethyl ammonium bromide induced hormesis.

Authors:  Qiongzhi Zhou; Feng Li; Fei Ge; Na Liu; Yangduo Kuang
Journal:  Environ Sci Pollut Res Int       Date:  2016-07-05       Impact factor: 4.223

10.  Phosphorus Availability Alters the Effects of Silver Nanoparticles on Periphyton Growth and Stoichiometry.

Authors:  Beth C Norman; Marguerite A Xenopoulos; Daniel Braun; Paul C Frost
Journal:  PLoS One       Date:  2015-06-15       Impact factor: 3.240

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