Literature DB >> 29947897

Mass spectrometry-based proteomics for system-level characterization of biological responses to engineered nanomaterials.

Tong Zhang1, Matthew J Gaffrey1, Brian D Thrall1, Wei-Jun Qian2.   

Abstract

The widespread use of engineered nanomaterials or nanotechnology makes the characterization of biological responses to nanomaterials an important area of research. The application of omics approaches, such as mass spectrometry-based proteomics, has revealed new insights into the cellular responses of exposure to nanomaterials, including how nanomaterials interact and alter cellular pathways. In addition, exposure to engineered nanomaterials often leads to the generation of reactive oxygen species and cellular oxidative stress, which implicates a redox-dependent regulation of cellular responses under such conditions. In this review, we discuss quantitative proteomics-based approaches, with an emphasis on redox proteomics, as a tool for system-level characterization of the biological responses induced by engineered nanomaterials. Graphical abstract ᅟ.

Entities:  

Keywords:  Engineered nanomaterials; Oxidative stress; Post-translational modifications; Proteomics; Redox proteomics; Thiol

Mesh:

Substances:

Year:  2018        PMID: 29947897      PMCID: PMC6119095          DOI: 10.1007/s00216-018-1168-6

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  85 in total

1.  Tandem mass tags: a novel quantification strategy for comparative analysis of complex protein mixtures by MS/MS.

Authors:  Andrew Thompson; Jürgen Schäfer; Karsten Kuhn; Stefan Kienle; Josef Schwarz; Günter Schmidt; Thomas Neumann; R Johnstone; A Karim A Mohammed; Christian Hamon
Journal:  Anal Chem       Date:  2003-04-15       Impact factor: 6.986

2.  Analysis of protein changes using two-dimensional difference gel electrophoresis.

Authors:  Weimin Gao
Journal:  Methods Mol Biol       Date:  2014

3.  Insights into the cellular response triggered by silver nanoparticles using quantitative proteomics.

Authors:  Thiago Verano-Braga; Rona Miethling-Graff; Katarzyna Wojdyla; Adelina Rogowska-Wrzesinska; Jonathan R Brewer; Helmut Erdmann; Frank Kjeldsen
Journal:  ACS Nano       Date:  2014-02-20       Impact factor: 15.881

4.  Molecular responses of mouse macrophages to copper and copper oxide nanoparticles inferred from proteomic analyses.

Authors:  Sarah Triboulet; Catherine Aude-Garcia; Marie Carrière; Hélène Diemer; Fabienne Proamer; Aurélie Habert; Mireille Chevallet; Véronique Collin-Faure; Jean-Marc Strub; Daniel Hanau; Alain Van Dorsselaer; Nathalie Herlin-Boime; Thierry Rabilloud
Journal:  Mol Cell Proteomics       Date:  2013-07-23       Impact factor: 5.911

5.  Proteomic evaluation of citrate-coated silver nanoparticles toxicity in Daphnia magna.

Authors:  Louis-Charles Rainville; Darragh Carolan; Ana Coelho Varela; Hugh Doyle; David Sheehan
Journal:  Analyst       Date:  2014-04-07       Impact factor: 4.616

6.  From the Cover: Comparative Proteomics Reveals Silver Nanoparticles Alter Fatty Acid Metabolism and Amyloid Beta Clearance for Neuronal Apoptosis in a Triple Cell Coculture Model of the Blood-Brain Barrier.

Authors:  Ho-Chen Lin; Ming-Yi Ho; Chao-Ming Tsen; Chien-Chu Huang; Chin-Ching Wu; Yuh-Jeen Huang; I-Lun Hsiao; Chun-Yu Chuang
Journal:  Toxicol Sci       Date:  2017-07-01       Impact factor: 4.849

7.  Changes in protein expression in rat bronchoalveolar lavage fluid after exposure to zinc oxide nanoparticles: an iTRAQ proteomic approach.

Authors:  Yu-Min Juang; Ben-Heng Lai; Han-Ju Chien; Meng Ho; Tsun-Jen Cheng; Chien-Chen Lai
Journal:  Rapid Commun Mass Spectrom       Date:  2014-04-30       Impact factor: 2.419

Review 8.  Nanotoxicity: An Interplay of Oxidative Stress, Inflammation and Cell Death.

Authors:  Puja Khanna; Cynthia Ong; Boon Huat Bay; Gyeong Hun Baeg
Journal:  Nanomaterials (Basel)       Date:  2015-06-30       Impact factor: 5.076

9.  Proteomic analysis of protein carbonylation: a useful tool to unravel nanoparticle toxicity mechanisms.

Authors:  Marc D Driessen; Sarah Mues; Antje Vennemann; Bryan Hellack; Anne Bannuscher; Vishalini Vimalakanthan; Christian Riebeling; Rainer Ossig; Martin Wiemann; Jürgen Schnekenburger; Thomas A J Kuhlbusch; Bernhard Renard; Andreas Luch; Andrea Haase
Journal:  Part Fibre Toxicol       Date:  2015-11-02       Impact factor: 9.400

10.  A hyperspectral and toxicological analysis of protein corona impact on silver nanoparticle properties, intracellular modifications, and macrophage activation.

Authors:  Jonathan H Shannahan; Ramakrishna Podila; Jared M Brown
Journal:  Int J Nanomedicine       Date:  2015-10-13
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  9 in total

1.  A proteome-wide assessment of the oxidative stress paradigm for metal and metal-oxide nanomaterials in human macrophages.

Authors:  Tong Zhang; Matthew J Gaffrey; Dennis G Thomas; Thomas J Weber; Becky M Hess; Karl K Weitz; Paul D Piehowski; Vladislav A Petyuk; Ronald J Moore; Wei-Jun Qian; Brian D Thrall
Journal:  NanoImpact       Date:  2019-11-23

2.  Evaluation of the cytotoxic and cellular proteome impacts of food-grade TiO2 (E171) using simulated gastrointestinal digestions and a tri-culture small intestinal epithelial model.

Authors:  Xiaoqiong Cao; Tong Zhang; Glen M DeLoid; Matthew J Gaffrey; Karl K Weitz; Brian D Thrall; Wei-Jun Qian; Philip Demokritou
Journal:  NanoImpact       Date:  2020-01

Review 3.  Characterization of cellular oxidative stress response by stoichiometric redox proteomics.

Authors:  Tong Zhang; Matthew J Gaffrey; Xiaolu Li; Wei-Jun Qian
Journal:  Am J Physiol Cell Physiol       Date:  2020-12-02       Impact factor: 4.249

4.  Block Design with Common Reference Samples Enables Robust Large-Scale Label-Free Quantitative Proteome Profiling.

Authors:  Tong Zhang; Matthew J Gaffrey; Matthew E Monroe; Dennis G Thomas; Karl K Weitz; Paul D Piehowski; Vladislav A Petyuk; Ronald J Moore; Brian D Thrall; Wei-Jun Qian
Journal:  J Proteome Res       Date:  2020-05-22       Impact factor: 4.466

5.  Systematic Review of Multi-Omics Approaches to Investigate Toxicological Effects in Macrophages.

Authors:  Isabel Karkossa; Stefanie Raps; Martin von Bergen; Kristin Schubert
Journal:  Int J Mol Sci       Date:  2020-12-09       Impact factor: 5.923

6.  Proteomics unite traditional toxicological assessment methods to evaluate the toxicity of iron oxide nanoparticles.

Authors:  Junyuan Han; Yongzhang Tian; Minghan Wang; Yajuan Li; Jiye Yin; Wensheng Qu; Changhui Yan; Rigao Ding; Yongbiao Guan; Quanjun Wang
Journal:  Front Pharmacol       Date:  2022-09-12       Impact factor: 5.988

Review 7.  Redox toxicology of environmental chemicals causing oxidative stress.

Authors:  Fuli Zheng; Filipe Marques Gonçalves; Yumi Abiko; Huangyuan Li; Yoshito Kumagai; Michael Aschner
Journal:  Redox Biol       Date:  2020-04-18       Impact factor: 11.799

8.  An in-depth multi-omics analysis in RLE-6TN rat alveolar epithelial cells allows for nanomaterial categorization.

Authors:  Isabel Karkossa; Anne Bannuscher; Bryan Hellack; Aileen Bahl; Sophia Buhs; Peter Nollau; Andreas Luch; Kristin Schubert; Martin von Bergen; Andrea Haase
Journal:  Part Fibre Toxicol       Date:  2019-10-25       Impact factor: 9.400

9.  Integrated Redox Proteomic Analysis Highlights New Mechanisms of Sensitivity to Silver Nanoparticles.

Authors:  Reetta Holmila; Hanzhi Wu; Jingyun Lee; Allen W Tsang; Ravi Singh; Cristina M Furdui
Journal:  Mol Cell Proteomics       Date:  2021-03-20       Impact factor: 5.911

  9 in total

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