Literature DB >> 24530704

Comparative whole genome analysis of six diagnostic brucellaphages.

Jason Farlow1, Andrey A Filippov2, Kirill V Sergueev2, Jun Hang3, Adam Kotorashvili4, Mikeljon P Nikolich5.   

Abstract

Whole genome sequencing of six diagnostic brucellaphages, Tbilisi (Tb), Firenze (Fz), Weybridge (Wb), S708, Berkeley (Bk) and R/C, was followed with genomic comparisons including recently described genomes of the Tb phage from Mexico (TbM) and Pr phage to elucidate genomic diversity and candidate host range determinants. Comparative whole genome analysis revealed high sequence homogeneity among these brucellaphage genomes and resolved three genetic groups consistent with defined host range phenotypes. Group I was composed of Tb and Fz phages that are predominantly lytic for Brucella abortus and Brucella neotomae; Group II included Bk, R/C, and Pr phages that are lytic mainly for B. abortus, Brucella melitensis and Brucella suis; Group III was composed of Wb and S708 phages that are lytic for B. suis, B. abortus and B. neotomae. We found that the putative phage collar protein is a variable locus with features that may be contributing to the host specificities exhibited by different brucellaphage groups. The presence of several candidate host range determinants is illustrated herein for future dissection of the differential host specificity observed among these phages. Published by Elsevier B.V.

Entities:  

Keywords:  Bacteriophage; Brucella; Brucellaphage; Comparative genomics

Mesh:

Substances:

Year:  2014        PMID: 24530704     DOI: 10.1016/j.gene.2014.01.018

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  9 in total

1.  On genome annotation of Brucellaphage Gadvasu (BpG): discovery of ORFans for integrated systems biology approaches.

Authors:  Deepti Chachra; Pushpinder Kaur; Prasad Siddavatam; Prashanth Suravajhala; Hari Mohan Saxena
Journal:  Syst Synth Biol       Date:  2015-11-21

2.  Correlation of Host Range Expansion of Therapeutic Bacteriophage Sb-1 with Allele State at a Hypervariable Repeat Locus.

Authors:  Kirill V Sergueev; Andrey A Filippov; Jason Farlow; Wanwen Su; Leila Kvachadze; Nana Balarjishvili; Mzia Kutateladze; Mikeljon P Nikolich
Journal:  Appl Environ Microbiol       Date:  2019-10-30       Impact factor: 4.792

3.  Whole genome sequence comparison of ten diagnostic brucellaphages propagated on two Brucella abortus hosts.

Authors:  Ekaterine Tevdoradze; Jason Farlow; Adam Kotorashvili; Natia Skhirtladze; Irina Antadze; Sophio Gunia; Nana Balarjishvili; Leila Kvachadze; Mzia Kutateladze
Journal:  Virol J       Date:  2015-04-22       Impact factor: 4.099

4.  Isolation and Genomic Characterization of the T4-Like Bacteriophage PM2 Infecting Pectobacterium carotovorum subsp. carotovorum.

Authors:  Jeong-A Lim; Dong Hwan Lee; Sunggi Heu
Journal:  Plant Pathol J       Date:  2015-03-31       Impact factor: 1.795

5.  Analysis of the First Temperate Broad Host Range Brucellaphage (BiPBO1) Isolated from B. inopinata.

Authors:  Jens A Hammerl; Cornelia Göllner; Sascha Al Dahouk; Karsten Nöckler; Jochen Reetz; Stefan Hertwig
Journal:  Front Microbiol       Date:  2016-01-28       Impact factor: 5.640

6.  Highly Sensitive Bacteriophage-Based Detection of Brucella abortus in Mixed Culture and Spiked Blood.

Authors:  Kirill V Sergueev; Andrey A Filippov; Mikeljon P Nikolich
Journal:  Viruses       Date:  2017-06-10       Impact factor: 5.048

7.  Genetic Diversity of Brucella Reference and Non-reference Phages and Its Impact on Brucella-Typing.

Authors:  Jens A Hammerl; Cornelia Göllner; Claudia Jäckel; Holger C Scholz; Karsten Nöckler; Jochen Reetz; Sascha Al Dahouk; Stefan Hertwig
Journal:  Front Microbiol       Date:  2017-03-15       Impact factor: 5.640

8.  Comprehensive deciphering prophages in genus Acetobacter on the ecology, genomic features, toxin-antitoxin system, and linkage with CRISPR-Cas system.

Authors:  Chenggong Qian; Jiawen Ma; Jiale Liang; Lei Zhang; Xinle Liang
Journal:  Front Microbiol       Date:  2022-08-02       Impact factor: 6.064

9.  Genomic characterization of three novel Basilisk-like phages infecting Bacillus anthracis.

Authors:  J Farlow; D Bolkvadze; L Leshkasheli; I Kusradze; A Kotorashvili; N Kotaria; N Balarjishvili; L Kvachadze; M Nikolich; M Kutateladze
Journal:  BMC Genomics       Date:  2018-09-18       Impact factor: 3.969

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.