Literature DB >> 24528214

Associations of genetic variants in/near body mass index-associated genes with type 2 diabetes: a systematic meta-analysis.

Bo Xi1, Fumihiko Takeuchi, Aline Meirhaeghe, Norihiro Kato, John C Chambers, Andrew P Morris, Yoon Shin Cho, Weihua Zhang, Karen L Mohlke, Jaspal S Kooner, Xiao Ou Shu, Hongwei Pan, E Shyong Tai, Haiyan Pan, Jer-Yuarn Wu, Donghao Zhou, Giriraj R Chandak.   

Abstract

OBJECTIVE: Genome-wide association studies have identified many obesity/body mass index (BMI)-associated loci in Europeans and East Asians. Since then, a large number of studies have investigated the role of BMI-associated loci in the development of type 2 diabetes (T2D). However, the results have been inconsistent. The objective of this study was to investigate the associations of eleven obesity/BMI loci with T2D risk and explore how BMI influences this risk.
METHODS: We retrieved published literature from PubMed and Embase. The pooled odds ratios (OR) with 95% confidence intervals (CI) were calculated using fixed- or random-effect models.
RESULTS: In the meta-analysis of 42 studies for 11 obesity/BMI-associated loci, we observed a statistically significant association of the FTO rs9939609 polymorphism (66 425 T2D cases/239 689 normoglycaemic subjects; P = 1·00 × 10(-41) ) and six other variants with T2D risk (17 915 T2D cases/27 531 normoglycaemic individuals: n = 40 629-130 001; all P < 0·001 for SH2B1 rs7498665, FAIM2 rs7138803, TMEM18 rs7561317, GNPDA2 rs10938397, BDNF rs925946 and NEGR1 rs2568958). After adjustment for BMI, the association remained statistically significant for four of the seven variants (all P < 0·05 for FTO rs9939609, SH2B1 rs7498665, FAIM2 rs7138803, GNPDA2 rs10938397). Subgroup analysis by ethnicity demonstrated similar results.
CONCLUSIONS: This meta-analysis indicates that several BMI-associated variants are significantly associated with T2D risk. Some variants increase the T2D risk independent of obesity, while others mediate this risk through obesity.
© 2014 John Wiley & Sons Ltd.

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Year:  2014        PMID: 24528214      PMCID: PMC5568704          DOI: 10.1111/cen.12428

Source DB:  PubMed          Journal:  Clin Endocrinol (Oxf)        ISSN: 0300-0664            Impact factor:   3.478


  53 in total

1.  Combined effects of MC4R and FTO common genetic variants on obesity in European general populations.

Authors:  Stéphane Cauchi; Fanny Stutzmann; Christine Cavalcanti-Proença; Emmanuelle Durand; Anneli Pouta; Anna-Liisa Hartikainen; Michel Marre; Sylviane Vol; Tuija Tammelin; Jaana Laitinen; Arturo Gonzalez-Izquierdo; Alexandra I F Blakemore; Paul Elliott; David Meyre; Beverley Balkau; Marjo-Riitta Järvelin; Philippe Froguel
Journal:  J Mol Med (Berl)       Date:  2009-03-03       Impact factor: 4.599

2.  Meta-analysis added power to identify variants in FTO associated with type 2 diabetes and obesity in the Asian population.

Authors:  Yun Liu; Zhe Liu; Yiqing Song; Daizhan Zhou; Di Zhang; Teng Zhao; Zhuo Chen; Lan Yu; Yifeng Yang; Guoyin Feng; Jun Li; Jie Zhang; Simin Liu; Zuofeng Zhang; Lin He; He Xu
Journal:  Obesity (Silver Spring)       Date:  2010-01-07       Impact factor: 5.002

3.  Variants of the PPARG, IGF2BP2, CDKAL1, HHEX, and TCF7L2 genes confer risk of type 2 diabetes independently of BMI in the German KORA studies.

Authors:  C Herder; W Rathmann; K Strassburger; H Finner; H Grallert; C Huth; C Meisinger; C Gieger; S Martin; G Giani; W A Scherbaum; H-E Wichmann; T Illig
Journal:  Horm Metab Res       Date:  2008-07-02       Impact factor: 2.936

4.  Investigation of type 2 diabetes risk alleles support CDKN2A/B, CDKAL1, and TCF7L2 as susceptibility genes in a Han Chinese cohort.

Authors:  Jie Wen; Tina Rönn; Anders Olsson; Zhen Yang; Bin Lu; Yieping Du; Leif Groop; Charlotte Ling; Renming Hu
Journal:  PLoS One       Date:  2010-02-10       Impact factor: 3.240

5.  FTO gene variants are strongly associated with type 2 diabetes in South Asian Indians.

Authors:  C S Yajnik; C S Janipalli; S Bhaskar; S R Kulkarni; R M Freathy; S Prakash; K R Mani; M N Weedon; S D Kale; J Deshpande; G V Krishnaveni; S R Veena; C H D Fall; M I McCarthy; T M Frayling; A T Hattersley; G R Chandak
Journal:  Diabetologia       Date:  2008-11-13       Impact factor: 10.122

6.  Replication of genome-wide association signals in UK samples reveals risk loci for type 2 diabetes.

Authors:  Eleftheria Zeggini; Michael N Weedon; Cecilia M Lindgren; Timothy M Frayling; Katherine S Elliott; Hana Lango; Nicholas J Timpson; John R B Perry; Nigel W Rayner; Rachel M Freathy; Jeffrey C Barrett; Beverley Shields; Andrew P Morris; Sian Ellard; Christopher J Groves; Lorna W Harries; Jonathan L Marchini; Katharine R Owen; Beatrice Knight; Lon R Cardon; Mark Walker; Graham A Hitman; Andrew D Morris; Alex S F Doney; Mark I McCarthy; Andrew T Hattersley
Journal:  Science       Date:  2007-04-26       Impact factor: 47.728

7.  Genome-wide association scan shows genetic variants in the FTO gene are associated with obesity-related traits.

Authors:  Angelo Scuteri; Serena Sanna; Wei-Min Chen; Manuela Uda; Giuseppe Albai; James Strait; Samer Najjar; Ramaiah Nagaraja; Marco Orrú; Gianluca Usala; Mariano Dei; Sandra Lai; Andrea Maschio; Fabio Busonero; Antonella Mulas; Georg B Ehret; Ashley A Fink; Alan B Weder; Richard S Cooper; Pilar Galan; Aravinda Chakravarti; David Schlessinger; Antonio Cao; Edward Lakatta; Gonçalo R Abecasis
Journal:  PLoS Genet       Date:  2007-07       Impact factor: 5.917

8.  Impact of nine common type 2 diabetes risk polymorphisms in Asian Indian Sikhs: PPARG2 (Pro12Ala), IGF2BP2, TCF7L2 and FTO variants confer a significant risk.

Authors:  Dharambir K Sanghera; Lyda Ortega; Shizhong Han; Jairup Singh; Sarju K Ralhan; Gurpreet S Wander; Narinder K Mehra; John J Mulvihill; Robert E Ferrell; Swapan K Nath; Mohammed I Kamboh
Journal:  BMC Med Genet       Date:  2008-07-03       Impact factor: 2.103

9.  Common variation in the fat mass and obesity-associated (FTO) gene confers risk of obesity and modulates BMI in the Chinese population.

Authors:  Yi-Cheng Chang; Pi-Hua Liu; Wei-Jei Lee; Tien-Jyun Chang; Yi-Der Jiang; Hung-Yuan Li; Shan-Shan Kuo; Kuang-Chin Lee; Lee-Ming Chuang
Journal:  Diabetes       Date:  2008-05-16       Impact factor: 9.461

10.  Six new loci associated with body mass index highlight a neuronal influence on body weight regulation.

Authors:  Cristen J Willer; Elizabeth K Speliotes; Ruth J F Loos; Shengxu Li; Cecilia M Lindgren; Iris M Heid; Sonja I Berndt; Amanda L Elliott; Anne U Jackson; Claudia Lamina; Guillaume Lettre; Noha Lim; Helen N Lyon; Steven A McCarroll; Konstantinos Papadakis; Lu Qi; Joshua C Randall; Rosa Maria Roccasecca; Serena Sanna; Paul Scheet; Michael N Weedon; Eleanor Wheeler; Jing Hua Zhao; Leonie C Jacobs; Inga Prokopenko; Nicole Soranzo; Toshiko Tanaka; Nicholas J Timpson; Peter Almgren; Amanda Bennett; Richard N Bergman; Sheila A Bingham; Lori L Bonnycastle; Morris Brown; Noël P Burtt; Peter Chines; Lachlan Coin; Francis S Collins; John M Connell; Cyrus Cooper; George Davey Smith; Elaine M Dennison; Parimal Deodhar; Paul Elliott; Michael R Erdos; Karol Estrada; David M Evans; Lauren Gianniny; Christian Gieger; Christopher J Gillson; Candace Guiducci; Rachel Hackett; David Hadley; Alistair S Hall; Aki S Havulinna; Johannes Hebebrand; Albert Hofman; Bo Isomaa; Kevin B Jacobs; Toby Johnson; Pekka Jousilahti; Zorica Jovanovic; Kay-Tee Khaw; Peter Kraft; Mikko Kuokkanen; Johanna Kuusisto; Jaana Laitinen; Edward G Lakatta; Jian'an Luan; Robert N Luben; Massimo Mangino; Wendy L McArdle; Thomas Meitinger; Antonella Mulas; Patricia B Munroe; Narisu Narisu; Andrew R Ness; Kate Northstone; Stephen O'Rahilly; Carolin Purmann; Matthew G Rees; Martin Ridderstråle; Susan M Ring; Fernando Rivadeneira; Aimo Ruokonen; Manjinder S Sandhu; Jouko Saramies; Laura J Scott; Angelo Scuteri; Kaisa Silander; Matthew A Sims; Kijoung Song; Jonathan Stephens; Suzanne Stevens; Heather M Stringham; Y C Loraine Tung; Timo T Valle; Cornelia M Van Duijn; Karani S Vimaleswaran; Peter Vollenweider; Gerard Waeber; Chris Wallace; Richard M Watanabe; Dawn M Waterworth; Nicholas Watkins; Jacqueline C M Witteman; Eleftheria Zeggini; Guangju Zhai; M Carola Zillikens; David Altshuler; Mark J Caulfield; Stephen J Chanock; I Sadaf Farooqi; Luigi Ferrucci; Jack M Guralnik; Andrew T Hattersley; Frank B Hu; Marjo-Riitta Jarvelin; Markku Laakso; Vincent Mooser; Ken K Ong; Willem H Ouwehand; Veikko Salomaa; Nilesh J Samani; Timothy D Spector; Tiinamaija Tuomi; Jaakko Tuomilehto; Manuela Uda; André G Uitterlinden; Nicholas J Wareham; Panagiotis Deloukas; Timothy M Frayling; Leif C Groop; Richard B Hayes; David J Hunter; Karen L Mohlke; Leena Peltonen; David Schlessinger; David P Strachan; H-Erich Wichmann; Mark I McCarthy; Michael Boehnke; Inês Barroso; Gonçalo R Abecasis; Joel N Hirschhorn
Journal:  Nat Genet       Date:  2008-12-14       Impact factor: 38.330

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  15 in total

1.  Effect of six type II diabetes susceptibility loci and an FTO variant on obesity in Pakistani subjects.

Authors:  Saleem Ullah Shahid; Ka Wah Li; Jayshree Acharya; Jackie A Cooper; Shahida Hasnain; Stephen E Humphries
Journal:  Eur J Hum Genet       Date:  2015-09-23       Impact factor: 4.246

2.  Polymorphisms of the peroxisome proliferator-activated receptor-γ (rs1801282) and its coactivator-1 (rs8192673) are associated with obesity indexes in subjects with type 2 diabetes mellitus.

Authors:  Peter Kruzliak; Andreana P Haley; Jovana Nikolajevic Starcevic; Ludovit Gaspar; Daniel Petrovic
Journal:  Cardiovasc Diabetol       Date:  2015-04-28       Impact factor: 9.951

3.  Relevance of the dietary glycemic index, glycemic load and genetic predisposition for the glucose homeostasis of Chinese adults without diabetes.

Authors:  Guo Cheng; Hongmei Xue; Jiao Luo; Hong Jia; Lishi Zhang; Junbiao Dai; Anette E Buyken
Journal:  Sci Rep       Date:  2017-03-24       Impact factor: 4.379

4.  FTO Genotype and Type 2 Diabetes Mellitus: Spatial Analysis and Meta-Analysis of 62 Case-Control Studies from Different Regions.

Authors:  Ying Yang; Boyang Liu; Wei Xia; Jing Yan; Huan-Yu Liu; Ling Hu; Song-Mei Liu
Journal:  Genes (Basel)       Date:  2017-02-11       Impact factor: 4.096

5.  First genome-wide association study in an Australian aboriginal population provides insights into genetic risk factors for body mass index and type 2 diabetes.

Authors:  Denise Anderson; Heather J Cordell; Michaela Fakiola; Richard W Francis; Genevieve Syn; Elizabeth S H Scaman; Elizabeth Davis; Simon J Miles; Toby McLeay; Sarra E Jamieson; Jenefer M Blackwell
Journal:  PLoS One       Date:  2015-03-11       Impact factor: 3.240

6.  Body mass index and health status in diabetic and non-diabetic individuals.

Authors:  A Jerant; K D Bertakis; P Franks
Journal:  Nutr Diabetes       Date:  2015-04-27       Impact factor: 5.097

7.  Phenome-wide association studies demonstrating pleiotropy of genetic variants within FTO with and without adjustment for body mass index.

Authors:  Robert M Cronin; Julie R Field; Yuki Bradford; Christian M Shaffer; Robert J Carroll; Jonathan D Mosley; Lisa Bastarache; Todd L Edwards; Scott J Hebbring; Simon Lin; Lucia A Hindorff; Paul K Crane; Sarah A Pendergrass; Marylyn D Ritchie; Dana C Crawford; Jyotishman Pathak; Suzette J Bielinski; David S Carrell; David R Crosslin; David H Ledbetter; David J Carey; Gerard Tromp; Marc S Williams; Eric B Larson; Gail P Jarvik; Peggy L Peissig; Murray H Brilliant; Catherine A McCarty; Christopher G Chute; Iftikhar J Kullo; Erwin Bottinger; Rex Chisholm; Maureen E Smith; Dan M Roden; Joshua C Denny
Journal:  Front Genet       Date:  2014-08-05       Impact factor: 4.599

8.  Is FTO gene variant related to cancer risk independently of adiposity? An updated meta-analysis of 129,467 cases and 290,633 controls.

Authors:  Yu Kang; Fang Liu; Yao Liu
Journal:  Oncotarget       Date:  2017-03-22

9.  SH2B1 promotes epithelial-mesenchymal transition through the IRS1/β-catenin signaling axis in lung adenocarcinoma.

Authors:  Shaoqiang Wang; Yuanda Cheng; Yang Gao; Zhiwei He; Wolong Zhou; Ruimin Chang; Zhenzi Peng; Yingying Zheng; Chaojun Duan; Chunfang Zhang
Journal:  Mol Carcinog       Date:  2018-02-20       Impact factor: 4.784

10.  Genome-wide methylation analysis identifies ELOVL5 as an epigenetic biomarker for the risk of type 2 diabetes mellitus.

Authors:  Joo-Yeon Hwang; Hyo Jung Lee; Min Jin Go; Han Byul Jang; Nak-Hyun Choi; Jae Bum Bae; Juan E Castillo-Fernandez; Jordana T Bell; Tim D Spector; Hye-Ja Lee; Bong-Jo Kim
Journal:  Sci Rep       Date:  2018-10-05       Impact factor: 4.379

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