Literature DB >> 24526998

4-[(E)-(4-Chloro-benzyl-idene)amino]-3-methyl-1H-1,2,4-triazole-5(4H)-thione.

B K Sarojini1, P S Manjula2, Manpreet Kaur3, Brian J Anderson4, Jerry P Jasinski4.   

Abstract

In the title compound, C10H9ClN4S, the dihedral angle between the mean planes of the phenyl and 1H-1,2,4-triazole-5(4H)-thione rings is 25.3 (9)°. The latter ring is essentially planar, with maximum deviations of 0.010 and -0.010 Å for the ring N atom in the 4-position and ring C atom bearing the methyl group, respectively. An intra-molecular C-H⋯S contact occurs. In the crystal, pairs of weak N-H⋯S inter-actions link the mol-ecules into inversion dimers in the ac plane, forming R 2 (2)(8) graph-set motifs. In addition, weak π-π inter-actions [centroid-centroid distances = 3.3463 (14) and 3.6127 (13)Å] are observed.

Entities:  

Year:  2013        PMID: 24526998      PMCID: PMC3914094          DOI: 10.1107/S1600536813033527

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the chemistry of Schiff base compounds, see: Dubey & Vaid (1991 ▶); Yadav et al. (1994 ▶). For the use of Schiff bases containing different donor atoms in analytical applications and metal coordination, see: Galic et al. (2001 ▶); Wyrzykiewicz & Prukah (1998 ▶); Reddy & Lirgappa (1994 ▶). Many compounds containing S and N atoms are anti­hypertensive (Wei et al., 1981 ▶,1982 ▶), analgesic (Thieme et al., 1973a ▶,b ▶), anti­inflammatory (Dornow et al., 1964 ▶), sedative (Barrera et al.,1985 ▶), or fungicidal (Malik et al., 2011 ▶). For the crystal structures of related Schiff bases, see: Jeyaseelan et al. (2012 ▶); Devarajegowda et al. (2012 ▶); Vinduvahini et al. (2011 ▶); Almutairi et al. (2012 ▶); Kubicki et al. (2012 ▶); Praveen et al. (2012 ▶); Kant et al. (2012 ▶); Ding et al. (2009 ▶). For the crystal structures of Schiff bases reported by our group, see: Sarojini et al. (2007a ▶,b ▶). For standard bond lengths, see: Allen et al. (1987 ▶). For π–π stacking, see: Grimme (2008 ▶).

Experimental

Crystal data

C10H9ClN4S M = 252.72 Triclinic, a = 7.0718 (8) Å b = 7.2901 (8) Å c = 11.8434 (7) Å α = 92.778 (7)° β = 94.986 (7)° γ = 109.752 (10)° V = 570.50 (10) Å3 Z = 2 Cu Kα radiation μ = 4.49 mm−1 T = 173 K 0.42 × 0.08 × 0.06 mm

Data collection

Agilent Gemini EOS diffractometer Absorption correction: multi-scan (CrysAlis PRO and CrysAlis RED; Agilent, 2012 ▶) T min = 0.544, T max = 1.000 3413 measured reflections 2195 independent reflections 1860 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.120 S = 1.02 2195 reflections 146 parameters H-atom parameters constrained Δρmax = 0.34 e Å−3 Δρmin = −0.39 e Å−3 Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis RED (Agilent, 2012 ▶); program(s) used to solve structure: SUPERFLIP (Palatinus & Chapuis, 2007 ▶); program(s) used to refine structure: SHELXL2012 (Sheldrick, 2008 ▶); molecular graphics: OLEX2 (Dolomanov et al., 2009 ▶); software used to prepare material for publication: OLEX2. Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536813033527/qm2102sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813033527/qm2102Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536813033527/qm2102Isup3.cml Additional supporting information: crystallographic information; 3D view; checkCIF report
C10H9ClN4SZ = 2
Mr = 252.72F(000) = 260
Triclinic, P1Dx = 1.471 Mg m3
a = 7.0718 (8) ÅCu Kα radiation, λ = 1.54184 Å
b = 7.2901 (8) ÅCell parameters from 1400 reflections
c = 11.8434 (7) Åθ = 3.8–72.2°
α = 92.778 (7)°µ = 4.49 mm1
β = 94.986 (7)°T = 173 K
γ = 109.752 (10)°Irregular, colourless
V = 570.50 (10) Å30.42 × 0.08 × 0.06 mm
Agilent Gemini EOS diffractometer2195 independent reflections
Radiation source: Enhance (Cu) X-ray Source1860 reflections with I > 2σ(I)
Detector resolution: 16.0416 pixels mm-1Rint = 0.030
ω scansθmax = 72.3°, θmin = 3.8°
Absorption correction: multi-scan (CrysAlis PRO and CrysAlis RED; Agilent, 2012)h = −8→8
Tmin = 0.544, Tmax = 1.000k = −8→8
3413 measured reflectionsl = −10→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.043H-atom parameters constrained
wR(F2) = 0.120w = 1/[σ2(Fo2) + (0.0694P)2] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
2195 reflectionsΔρmax = 0.34 e Å3
146 parametersΔρmin = −0.39 e Å3
0 restraints
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
Cl10.50541 (9)0.96033 (9)0.77738 (5)0.03752 (19)
S1−0.33106 (9)0.64930 (9)0.16551 (5)0.03564 (19)
N10.0401 (3)0.4905 (3)0.27296 (16)0.0295 (4)
N2−0.0729 (3)0.4344 (3)0.16664 (15)0.0287 (4)
N3−0.1813 (3)0.2442 (3)0.00660 (17)0.0353 (4)
N4−0.2891 (3)0.3680 (3)0.02140 (16)0.0317 (4)
H4−0.38620.3696−0.02710.038*
C10.0775 (3)0.6667 (3)0.31206 (19)0.0311 (5)
H10.03640.75200.26840.037*
C20.1852 (3)0.7342 (3)0.42579 (19)0.0289 (5)
C30.2005 (3)0.9179 (3)0.4726 (2)0.0320 (5)
H30.14600.99570.43010.038*
C40.2955 (3)0.9876 (3)0.5816 (2)0.0318 (5)
H4A0.30261.10950.61310.038*
C50.3788 (3)0.8714 (3)0.64183 (19)0.0307 (5)
C60.3682 (3)0.6889 (3)0.5977 (2)0.0329 (5)
H60.42650.61360.64000.039*
C70.2703 (3)0.6195 (3)0.4903 (2)0.0333 (5)
H70.26060.49590.46050.040*
C8−0.2301 (3)0.4851 (3)0.11732 (19)0.0291 (5)
C9−0.0524 (3)0.2861 (3)0.0975 (2)0.0322 (5)
C100.1023 (4)0.1949 (4)0.1262 (2)0.0431 (6)
H10A0.05900.10600.18370.065*
H10B0.22840.29490.15410.065*
H10C0.11950.12480.05940.065*
U11U22U33U12U13U23
Cl10.0398 (3)0.0455 (3)0.0282 (3)0.0191 (3)−0.0056 (2)−0.0031 (2)
S10.0364 (3)0.0421 (3)0.0329 (3)0.0242 (3)−0.0099 (2)−0.0080 (2)
N10.0255 (9)0.0372 (10)0.0263 (10)0.0134 (7)−0.0047 (7)0.0010 (7)
N20.0270 (9)0.0321 (9)0.0274 (10)0.0132 (7)−0.0046 (7)−0.0007 (7)
N30.0369 (10)0.0397 (10)0.0325 (11)0.0212 (8)−0.0063 (8)−0.0057 (8)
N40.0318 (10)0.0394 (10)0.0272 (10)0.0198 (8)−0.0066 (8)−0.0030 (8)
C10.0260 (10)0.0337 (11)0.0334 (12)0.0113 (8)−0.0029 (9)0.0044 (9)
C20.0208 (10)0.0344 (11)0.0296 (12)0.0087 (8)−0.0020 (8)0.0007 (9)
C30.0264 (10)0.0364 (12)0.0355 (12)0.0153 (9)−0.0017 (9)0.0010 (9)
C40.0282 (10)0.0353 (11)0.0339 (12)0.0152 (9)−0.0004 (9)−0.0041 (9)
C50.0248 (10)0.0406 (12)0.0260 (11)0.0112 (9)0.0007 (8)−0.0001 (9)
C60.0331 (11)0.0350 (11)0.0328 (12)0.0155 (9)−0.0015 (9)0.0064 (9)
C70.0346 (11)0.0307 (11)0.0342 (12)0.0122 (9)−0.0009 (10)−0.0001 (9)
C80.0284 (10)0.0330 (11)0.0269 (11)0.0138 (8)−0.0036 (8)0.0003 (9)
C90.0314 (11)0.0350 (11)0.0311 (12)0.0148 (9)−0.0021 (9)−0.0024 (9)
C100.0420 (14)0.0460 (14)0.0481 (16)0.0288 (12)−0.0086 (12)−0.0060 (12)
Cl1—C51.748 (2)C2—C71.402 (3)
S1—C81.689 (2)C3—H30.9300
N1—N21.395 (2)C3—C41.390 (3)
N1—C11.275 (3)C4—H4A0.9300
N2—C81.378 (3)C4—C51.377 (3)
N2—C91.379 (3)C5—C61.381 (3)
N3—N41.378 (2)C6—H60.9300
N3—C91.301 (3)C6—C71.379 (3)
N4—H40.8600C7—H70.9300
N4—C81.333 (3)C9—C101.484 (3)
C1—H10.9300C10—H10A0.9600
C1—C21.463 (3)C10—H10B0.9600
C2—C31.390 (3)C10—H10C0.9600
C1—N1—N2116.28 (19)C4—C5—C6122.1 (2)
C8—N2—N1131.27 (18)C6—C5—Cl1119.20 (18)
C8—N2—C9108.25 (18)C5—C6—H6120.4
C9—N2—N1119.99 (18)C7—C6—C5119.2 (2)
C9—N3—N4103.61 (18)C7—C6—H6120.4
N3—N4—H4122.9C2—C7—H7119.8
C8—N4—N3114.29 (18)C6—C7—C2120.4 (2)
C8—N4—H4122.9C6—C7—H7119.8
N1—C1—H1120.1N2—C8—S1129.63 (17)
N1—C1—C2119.8 (2)N4—C8—S1127.48 (17)
C2—C1—H1120.1N4—C8—N2102.87 (18)
C3—C2—C1118.6 (2)N2—C9—C10122.4 (2)
C3—C2—C7118.7 (2)N3—C9—N2110.94 (19)
C7—C2—C1122.6 (2)N3—C9—C10126.6 (2)
C2—C3—H3119.3C9—C10—H10A109.5
C4—C3—C2121.3 (2)C9—C10—H10B109.5
C4—C3—H3119.3C9—C10—H10C109.5
C3—C4—H4A120.9H10A—C10—H10B109.5
C5—C4—C3118.2 (2)H10A—C10—H10C109.5
C5—C4—H4A120.9H10B—C10—H10C109.5
C4—C5—Cl1118.70 (18)
Cl1—C5—C6—C7−179.28 (17)C1—C2—C3—C4178.0 (2)
N1—N2—C8—S15.3 (4)C1—C2—C7—C6−179.2 (2)
N1—N2—C8—N4−173.2 (2)C2—C3—C4—C51.4 (3)
N1—N2—C9—N3174.80 (19)C3—C2—C7—C6−0.4 (3)
N1—N2—C9—C10−6.5 (3)C3—C4—C5—Cl1178.09 (17)
N1—C1—C2—C3−171.5 (2)C3—C4—C5—C6−0.8 (3)
N1—C1—C2—C77.2 (3)C4—C5—C6—C7−0.4 (4)
N2—N1—C1—C2176.53 (18)C5—C6—C7—C21.0 (3)
N3—N4—C8—S1−177.92 (17)C7—C2—C3—C4−0.8 (3)
N3—N4—C8—N20.6 (3)C8—N2—C9—N32.0 (3)
N4—N3—C9—N2−1.5 (3)C8—N2—C9—C10−179.3 (2)
N4—N3—C9—C10179.8 (2)C9—N2—C8—S1177.00 (18)
C1—N1—N2—C8−35.9 (3)C9—N2—C8—N4−1.5 (2)
C1—N1—N2—C9153.2 (2)C9—N3—N4—C80.5 (3)
D—H···AD—HH···AD···AD—H···A
N4—H4···S1i0.862.433.2926 (19)176
C1—H1···S10.932.623.199 (2)121
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N4—H4⋯S1i 0.862.433.2926 (19)176
C1—H1⋯S10.932.623.199 (2)121

Symmetry code: (i) .

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