Literature DB >> 24526991

4-Amino-3-(4-hy-droxy-benz-yl)-1H-1,2,4-triazole-5(4H)-thione.

B K Sarojini1, P S Manjula2, Manpreet Kaur3, Brian J Anderson4, Jerry P Jasinski4.   

Abstract

In the title compound, C9H10N4OS, the dihedral angle between the benzene and 1H-1,2,4-triazole-5(4H)-thione rings is 67.51 (16)°. In the crystal, mol-ecules are liked via N-H⋯O hydrogen bonds, forming chains along the c-axis direction. The chains are linked via O-H⋯S hydrogen bonds, forming corrugated layers lying parallel to the bc plane. The layers are linked via N-H⋯N and N-H⋯S hydrogen bonds, forming a three-dimensional network.

Entities:  

Year:  2013        PMID: 24526991      PMCID: PMC3914088          DOI: 10.1107/S1600536813033370

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For biological properties of 1,2,4-triazole derivatives, see: Holla et al. (2001 ▶, 2006 ▶); Mullican et al. (1993 ▶); Jones et al. (1965 ▶); Shams El-Dine et al. (1974 ▶); Misato et al. (1977 ▶); Kane et al. (1988 ▶). For related structures, see: Puviarasan et al. (1999 ▶); Chen et al. (2007 ▶); Karczmarzyk et al. (2012 ▶); Gao et al. (2011 ▶).

Experimental

Crystal data

C9H10N4OS M = 222.27 Triclinic, a = 4.2117 (5) Å b = 6.1891 (7) Å c = 10.0641 (11) Å α = 100.590 (9)° β = 94.916 (9)° γ = 104.589 (10)° V = 247.14 (5) Å3 Z = 1 Mo Kα radiation μ = 0.31 mm−1 T = 173 K 0.34 × 0.30 × 0.24 mm

Data collection

Agilent Gemini EOS diffractometer Absorption correction: multi-scan (CrysAlis PRO and CrysAlis RED; Agilent, 2012 ▶). T min = 0.941, T max = 1.000 2555 measured reflections 1897 independent reflections 1826 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.102 S = 1.10 1897 reflections 145 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.29 e Å−3 Δρmin = −0.27 e Å−3 Absolute structure: Flack (1983 ▶), 265 Friedel pairs (15% coverage) Absolute structure parameter: −0.02 (9) Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis RED (Agilent, 2012 ▶); program(s) used to solve structure: SUPERFLIP (Palatinus & Chapuis, 2007 ▶); program(s) used to refine structure: SHELXL2012 (Sheldrick, 2008 ▶); molecular graphics: OLEX2 (Dolomanov et al., 2009 ▶); software used to prepare material for publication: OLEX2. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813033370/su2674sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813033370/su2674Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536813033370/su2674Isup3.cml Additional supporting information: crystallographic information; 3D view; checkCIF report
C9H10N4OSZ = 1
Mr = 222.27F(000) = 116
Triclinic, P1Dx = 1.493 Mg m3
a = 4.2117 (5) ÅMo Kα radiation, λ = 0.71073 Å
b = 6.1891 (7) ÅCell parameters from 1329 reflections
c = 10.0641 (11) Åθ = 3.5–32.8°
α = 100.590 (9)°µ = 0.31 mm1
β = 94.916 (9)°T = 173 K
γ = 104.589 (10)°Block, colourless
V = 247.14 (5) Å30.34 × 0.30 × 0.24 mm
Agilent Gemini EOS diffractometer1897 independent reflections
Radiation source: Enhance (Mo) X-ray Source1826 reflections with I > 2σ(I)
Detector resolution: 16.0416 pixels mm-1Rint = 0.035
ω scansθmax = 32.9°, θmin = 3.5°
Absorption correction: multi-scan (CrysAlis PRO and CrysAlis RED; Agilent, 2012).h = −6→6
Tmin = 0.941, Tmax = 1.000k = −8→9
2555 measured reflectionsl = −14→12
Refinement on F2Hydrogen site location: mixed
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.041w = 1/[σ2(Fo2) + (0.0512P)2] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.102(Δ/σ)max < 0.001
S = 1.10Δρmax = 0.29 e Å3
1897 reflectionsΔρmin = −0.27 e Å3
145 parametersAbsolute structure: Flack (1983), 265 Friedel pairs (15% coverage)
3 restraintsAbsolute structure parameter: −0.02 (9)
Primary atom site location: structure-invariant direct methods
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
S10.98393 (10)0.49047 (8)−0.16110 (7)0.02134 (16)
O11.3407 (6)1.0709 (3)0.7411 (2)0.0248 (4)
N10.8426 (6)1.0486 (4)0.0472 (3)0.0217 (5)
N20.9604 (6)0.9245 (4)−0.0560 (2)0.0205 (5)
H21.07380.9862−0.11560.025*
N30.7176 (5)0.6844 (3)0.0529 (2)0.0164 (4)
N40.5720 (6)0.4828 (4)0.0952 (3)0.0227 (5)
H4A0.38130.41580.04640.027*
C10.5336 (7)0.9471 (5)0.2357 (3)0.0211 (5)
H1A0.33420.81920.23140.025*
H1B0.46031.08710.23570.025*
C20.7593 (7)0.9795 (4)0.3678 (3)0.0187 (5)
C30.7404 (8)0.8033 (5)0.4367 (3)0.0238 (6)
H30.58760.65870.39910.029*
C40.9400 (8)0.8336 (5)0.5596 (3)0.0248 (6)
H40.92540.71040.60490.030*
C51.1611 (7)1.0458 (5)0.6157 (3)0.0200 (5)
C61.1905 (7)1.2236 (5)0.5479 (3)0.0229 (6)
H61.34661.36720.58490.027*
C70.9885 (8)1.1898 (5)0.4243 (3)0.0219 (5)
H71.00711.31190.37790.026*
C80.6955 (6)0.8986 (4)0.1125 (3)0.0167 (5)
C90.8850 (6)0.7017 (4)−0.0565 (3)0.0168 (5)
H11.500 (12)1.216 (7)0.758 (5)0.038 (11)*
H4B0.713 (8)0.395 (5)0.079 (3)0.009 (7)*
U11U22U33U12U13U23
S10.0238 (3)0.0209 (3)0.0187 (3)0.0076 (2)0.0035 (2)0.0003 (2)
O10.0279 (10)0.0253 (10)0.0156 (10)−0.0007 (8)−0.0003 (8)0.0027 (8)
N10.0283 (12)0.0185 (10)0.0187 (11)0.0085 (9)0.0033 (9)0.0020 (8)
N20.0267 (12)0.0182 (10)0.0158 (11)0.0041 (9)0.0051 (9)0.0039 (8)
N30.0182 (10)0.0157 (9)0.0148 (10)0.0033 (8)0.0018 (8)0.0041 (8)
N40.0253 (11)0.0180 (10)0.0247 (13)0.0021 (9)0.0074 (10)0.0079 (9)
C10.0215 (11)0.0252 (12)0.0185 (13)0.0102 (10)0.0038 (10)0.0038 (10)
C20.0221 (11)0.0212 (11)0.0132 (12)0.0070 (9)0.0053 (9)0.0017 (9)
C30.0278 (13)0.0204 (11)0.0203 (13)0.0018 (10)0.0023 (11)0.0043 (10)
C40.0322 (14)0.0202 (12)0.0194 (13)0.0012 (10)0.0023 (11)0.0061 (10)
C50.0215 (12)0.0234 (12)0.0145 (11)0.0059 (10)0.0058 (10)0.0016 (9)
C60.0253 (13)0.0194 (11)0.0199 (13)0.0007 (10)0.0050 (11)0.0008 (10)
C70.0289 (13)0.0193 (11)0.0187 (13)0.0067 (10)0.0067 (11)0.0051 (9)
C80.0185 (11)0.0173 (11)0.0138 (11)0.0059 (9)−0.0013 (9)0.0020 (9)
C90.0182 (11)0.0173 (10)0.0135 (11)0.0034 (9)0.0002 (9)0.0026 (9)
S1—C91.683 (3)C1—H1B0.9900
O1—C51.376 (4)C1—C21.517 (4)
O1—H10.95 (4)C1—C81.484 (4)
N1—N21.379 (3)C2—C31.385 (4)
N1—C81.297 (4)C2—C71.396 (4)
N2—H20.8800C3—H30.9500
N2—C91.334 (3)C3—C41.389 (4)
N3—N41.403 (3)C4—H40.9500
N3—C81.380 (3)C4—C51.390 (4)
N3—C91.364 (3)C5—C61.384 (4)
N4—H4A0.8645C6—H60.9500
N4—H4B0.91 (3)C6—C71.395 (4)
C1—H1A0.9900C7—H70.9500
C5—O1—H1106 (3)C2—C3—C4121.4 (3)
C8—N1—N2104.5 (2)C4—C3—H3119.3
N1—N2—H2123.4C3—C4—H4120.3
C9—N2—N1113.2 (2)C3—C4—C5119.4 (3)
C9—N2—H2123.4C5—C4—H4120.3
C8—N3—N4124.5 (2)O1—C5—C4117.3 (3)
C9—N3—N4126.6 (2)O1—C5—C6122.3 (2)
C9—N3—C8108.8 (2)C6—C5—C4120.4 (3)
N3—N4—H4A109.6C5—C6—H6120.4
N3—N4—H4B104 (2)C5—C6—C7119.3 (3)
H4A—N4—H4B109.9C7—C6—H6120.4
H1A—C1—H1B107.8C2—C7—H7119.4
C2—C1—H1A109.0C6—C7—C2121.1 (3)
C2—C1—H1B109.0C6—C7—H7119.4
C8—C1—H1A109.0N1—C8—N3110.1 (2)
C8—C1—H1B109.0N1—C8—C1125.8 (2)
C8—C1—C2113.0 (2)N3—C8—C1124.2 (2)
C3—C2—C1121.1 (2)N2—C9—S1129.2 (2)
C3—C2—C7118.3 (3)N2—C9—N3103.4 (2)
C7—C2—C1120.6 (2)N3—C9—S1127.36 (19)
C2—C3—H3119.3
O1—C5—C6—C7−176.7 (3)C3—C2—C7—C6−0.9 (4)
N1—N2—C9—S1−178.7 (2)C3—C4—C5—O1176.6 (3)
N1—N2—C9—N3−1.2 (3)C3—C4—C5—C6−2.1 (5)
N2—N1—C8—N3−0.1 (3)C4—C5—C6—C71.9 (4)
N2—N1—C8—C1178.4 (3)C5—C6—C7—C2−0.4 (4)
N4—N3—C8—N1−177.2 (3)C7—C2—C3—C40.7 (4)
N4—N3—C8—C14.3 (4)C8—N1—N2—C90.8 (3)
N4—N3—C9—S1−4.9 (4)C8—N3—C9—S1178.64 (19)
N4—N3—C9—N2177.5 (3)C8—N3—C9—N21.1 (3)
C1—C2—C3—C4−178.2 (3)C8—C1—C2—C3−98.8 (3)
C1—C2—C7—C6178.1 (3)C8—C1—C2—C782.2 (3)
C2—C1—C8—N1−94.8 (3)C9—N3—C8—N1−0.7 (3)
C2—C1—C8—N383.5 (3)C9—N3—C8—C1−179.1 (2)
C2—C3—C4—C50.7 (5)
D—H···AD—HH···AD···AD—H···A
N2—H2···O1i0.881.972.840 (3)170
O1—H1···S1ii0.95 (5)2.27 (5)3.180 (2)159 (4)
N4—H4A···S1iii0.862.743.435 (3)138
N4—H4B···N1iv0.91 (3)2.32 (3)3.149 (4)153 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H2⋯O1i 0.881.972.840 (3)170
O1—H1⋯S1ii 0.95 (5)2.27 (5)3.180 (2)159 (4)
N4—H4A⋯S1iii 0.862.743.435 (3)138
N4—H4B⋯N1iv 0.91 (3)2.32 (3)3.149 (4)153 (3)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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