Literature DB >> 24526990

4-Chloro-N'-[(3Z)-2-oxo-2,3-di-hydro-1H-indol-3-yl-idene]benzohydrazide.

Shaaban K Mohamed1, Joel T Mague2, Mehmet Akkurt3, Abdel-Aal M Jaber4, Mustafa R Albayati5.   

Abstract

In the title compound, C15H10ClN3O2, the benzene ring is slightly twisted out of the plane of the 2,3-di-hydro-1H-indole ring system (r.m.s. deviation = 0.007 Å), forming a dihedral angle of 7.4 (3)°. An intra-molecular N-H⋯O hydrogen bond forms a six-membered ring. In the crystal, mol-ecules are linked via N-H⋯O and C-H⋯O hydrogen bonds, forming layers alternately perpendicular to [011] and [0-11].

Entities:  

Year:  2013        PMID: 24526990      PMCID: PMC3914087          DOI: 10.1107/S1600536813033345

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the diverse bio-activities of acid hydrazides and their condensed products, see: Adekunle et al. (2012 ▶); Al-Assar et al. (2002 ▶); Dharmaraj et al. (2001 ▶); Jain & Vederas (2004 ▶); Jeeworth et al. (2000 ▶); Scozzafava et al. (2001 ▶); Siddappa et al. (2008 ▶); Strappaghetti et al. (2006 ▶).

Experimental

Crystal data

C15H10ClN3O2 M = 299.71 Orthorhombic, a = 31.0359 (12) Å b = 5.2549 (3) Å c = 7.8730 (4) Å V = 1284.01 (11) Å3 Z = 4 Cu Kα radiation μ = 2.72 mm−1 T = 102 K 0.22 × 0.17 × 0.01 mm

Data collection

Bruker D8 VENTURE PHOTON 100 CMOS diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2013 ▶) T min = 0.75, T max = 0.97 4190 measured reflections 1596 independent reflections 1434 reflections with I > 2σ(I) R int = 0.109

Refinement

R[F 2 > 2σ(F 2)] = 0.059 wR(F 2) = 0.152 S = 1.16 1596 reflections 193 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.30 e Å−3 Δρmin = −0.37 e Å−3 Absolute structure: Flack (1983 ▶), 478 Friedal pairs (44% coverage) Absolute structure parameter: −0.06 (5) Data collection: APEX2 (Bruker, 2013 ▶); cell refinement: SAINT (Bruker, 2013 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813033345/su2672sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813033345/su2672Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536813033345/su2672Isup3.cml Additional supporting information: crystallographic information; 3D view; checkCIF report
C15H10ClN3O2F(000) = 616
Mr = 299.71Dx = 1.550 Mg m3
Orthorhombic, Pca21Cu Kα radiation, λ = 1.54178 Å
Hall symbol: P 2c -2acCell parameters from 3290 reflections
a = 31.0359 (12) Åθ = 2.9–68.5°
b = 5.2549 (3) ŵ = 2.72 mm1
c = 7.8730 (4) ÅT = 102 K
V = 1284.01 (11) Å3Plate, yellow
Z = 40.22 × 0.17 × 0.01 mm
Bruker D8 VENTURE PHOTON 100 CMOS diffractometer1596 independent reflections
Radiation source: INCOATEC IµS micro–focus source1434 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.109
Detector resolution: 10.4167 pixels mm-1θmax = 68.5°, θmin = 5.7°
ω scansh = −32→37
Absorption correction: multi-scan (SADABS; Bruker, 2013)k = −5→5
Tmin = 0.75, Tmax = 0.97l = −8→9
4190 measured reflections
Refinement on F2Secondary atom site location: inferred from neighbouring sites
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.059 W = 1/[Σ2(Fo2) + (0.0459P)2 + 3.7436P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.152(Δ/σ)max < 0.001
S = 1.16Δρmax = 0.30 e Å3
1596 reflectionsΔρmin = −0.37 e Å3
193 parametersAbsolute structure: Flack (1983), 478 Friedal pairs (44% coverage)
3 restraintsAbsolute structure parameter: −0.06 (5)
Primary atom site location: difference Fourier map
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl1−0.02432 (5)0.0784 (4)0.5130 (3)0.0317 (6)
O10.15220 (15)0.7554 (12)0.7066 (7)0.0247 (19)
O20.21783 (16)0.0289 (11)0.3951 (7)0.0240 (19)
N10.18451 (17)0.4151 (14)0.5756 (8)0.0187 (19)
N20.22478 (17)0.5046 (12)0.6135 (8)0.0173 (19)
N30.29242 (19)0.0513 (13)0.4056 (8)0.0203 (19)
C10.0263 (2)0.2224 (17)0.5393 (10)0.026 (3)
C20.0616 (2)0.1072 (16)0.4604 (10)0.023 (2)
C30.1021 (2)0.2172 (17)0.4862 (10)0.026 (3)
C40.1069 (2)0.4273 (16)0.5882 (9)0.020 (2)
C50.0705 (2)0.5395 (17)0.6625 (10)0.026 (3)
C60.0301 (2)0.4340 (18)0.6391 (11)0.028 (3)
C70.1495 (2)0.5554 (18)0.6291 (10)0.024 (3)
C80.2560 (2)0.3623 (15)0.5494 (9)0.018 (2)
C90.2517 (2)0.1344 (16)0.4425 (10)0.022 (2)
C100.3234 (2)0.2196 (15)0.4808 (9)0.018 (2)
C110.3677 (2)0.2028 (16)0.4744 (10)0.022 (2)
C120.3910 (2)0.3895 (16)0.5590 (10)0.025 (3)
C130.3700 (2)0.5837 (17)0.6480 (10)0.025 (3)
C140.3253 (2)0.5978 (15)0.6566 (9)0.019 (3)
C150.3018 (2)0.4074 (16)0.5723 (9)0.021 (3)
H10.1866 (10)0.264 (9)0.523 (10)0.0220*
H20.05820−0.040300.391900.0280*
H30.126600.145500.432400.0310*
H3A0.30090−0.061300.324400.0250*
H50.073700.688800.729400.0320*
H60.005500.507300.691400.0340*
H110.381600.069200.414700.0270*
H120.421600.385300.556400.0290*
H130.386700.709500.704100.0300*
H140.311300.730600.717100.0230*
U11U22U33U12U13U23
Cl10.0189 (8)0.0414 (13)0.0349 (11)−0.0052 (7)−0.0031 (9)0.0024 (11)
O10.022 (3)0.030 (4)0.022 (3)0.004 (2)−0.001 (2)−0.009 (3)
O20.023 (3)0.030 (4)0.019 (3)−0.002 (2)−0.001 (2)−0.007 (3)
N10.015 (3)0.024 (4)0.017 (3)0.003 (2)−0.002 (2)−0.006 (3)
N20.019 (3)0.021 (4)0.012 (3)0.000 (2)0.002 (2)0.000 (3)
N30.020 (3)0.024 (4)0.017 (3)0.001 (3)−0.001 (3)−0.007 (3)
C10.020 (3)0.040 (6)0.019 (4)−0.006 (3)−0.008 (3)0.009 (4)
C20.023 (3)0.023 (5)0.024 (4)−0.003 (3)−0.004 (3)−0.006 (4)
C30.026 (4)0.033 (5)0.019 (4)−0.001 (3)−0.002 (4)−0.005 (4)
C40.025 (4)0.025 (5)0.010 (3)−0.004 (3)−0.003 (3)0.002 (3)
C50.022 (4)0.039 (6)0.018 (4)0.003 (3)0.001 (3)−0.005 (4)
C60.021 (4)0.040 (6)0.023 (4)0.007 (3)0.005 (3)−0.001 (4)
C70.022 (4)0.036 (6)0.015 (4)0.006 (3)0.001 (3)0.003 (4)
C80.025 (3)0.019 (5)0.009 (4)0.002 (3)0.005 (3)0.002 (3)
C90.013 (3)0.038 (5)0.016 (4)0.001 (3)−0.002 (3)0.005 (4)
C100.017 (3)0.025 (5)0.013 (4)0.000 (3)−0.003 (3)−0.004 (3)
C110.025 (3)0.022 (5)0.020 (4)0.006 (3)0.000 (3)0.004 (4)
C120.017 (3)0.034 (6)0.023 (5)0.002 (3)0.000 (3)0.003 (4)
C130.022 (4)0.034 (6)0.018 (4)−0.001 (3)−0.001 (3)0.001 (4)
C140.026 (4)0.016 (5)0.016 (4)0.000 (3)−0.001 (3)0.001 (3)
C150.024 (4)0.022 (5)0.018 (4)0.002 (3)−0.001 (3)−0.001 (3)
Cl1—C11.756 (7)C8—C91.470 (11)
O1—C71.218 (11)C8—C151.452 (9)
O2—C91.246 (9)C10—C151.394 (11)
N1—N21.368 (8)C10—C111.379 (9)
N1—C71.379 (10)C11—C121.389 (11)
N2—C81.324 (9)C12—C131.399 (11)
N3—C91.368 (9)C13—C141.391 (9)
N3—C101.434 (9)C14—C151.405 (11)
N1—H10.90 (5)C2—H20.9500
N3—H3A0.9100C3—H30.9500
C1—C61.367 (13)C5—H50.9500
C1—C21.397 (10)C6—H60.9500
C2—C31.398 (10)C11—H110.9500
C3—C41.373 (12)C12—H120.9500
C4—C51.402 (10)C13—H130.9500
C4—C71.518 (10)C14—H140.9500
C5—C61.383 (10)
N2—N1—C7118.0 (7)N3—C10—C15109.1 (6)
N1—N2—C8113.0 (6)C11—C10—C15123.0 (7)
C9—N3—C10109.6 (6)N3—C10—C11127.9 (7)
C7—N1—H1132 (2)C10—C11—C12117.2 (7)
N2—N1—H1110 (2)C11—C12—C13120.9 (6)
C9—N3—H3A129.00C12—C13—C14121.9 (7)
C10—N3—H3A120.00C13—C14—C15117.2 (7)
Cl1—C1—C6119.7 (5)C8—C15—C14133.1 (7)
C2—C1—C6122.7 (6)C10—C15—C14119.9 (6)
Cl1—C1—C2117.5 (6)C8—C15—C10106.9 (6)
C1—C2—C3117.5 (7)C1—C2—H2121.00
C2—C3—C4121.0 (7)C3—C2—H2121.00
C3—C4—C5119.6 (6)C2—C3—H3119.00
C3—C4—C7125.1 (6)C4—C3—H3120.00
C5—C4—C7115.3 (7)C4—C5—H5120.00
C4—C5—C6120.4 (8)C6—C5—H5120.00
C1—C6—C5118.7 (7)C1—C6—H6121.00
O1—C7—C4123.3 (6)C5—C6—H6121.00
N1—C7—C4112.6 (7)C10—C11—H11121.00
O1—C7—N1124.1 (6)C12—C11—H11122.00
N2—C8—C9127.7 (6)C11—C12—H12120.00
N2—C8—C15125.2 (7)C13—C12—H12120.00
C9—C8—C15107.0 (6)C12—C13—H13119.00
N3—C9—C8107.3 (6)C14—C13—H13119.00
O2—C9—N3125.0 (7)C13—C14—H14121.00
O2—C9—C8127.7 (6)C15—C14—H14122.00
C7—N1—N2—C8−177.0 (7)C5—C4—C7—N1170.3 (7)
N2—N1—C7—O10.7 (12)C4—C5—C6—C1−1.5 (13)
N2—N1—C7—C4−176.6 (6)N2—C8—C9—O2−1.7 (14)
N1—N2—C8—C92.1 (11)N2—C8—C9—N3179.7 (7)
N1—N2—C8—C15−178.5 (7)C15—C8—C9—O2178.8 (8)
C10—N3—C9—O2179.9 (7)C15—C8—C9—N30.1 (8)
C10—N3—C9—C8−1.4 (8)N2—C8—C15—C10−178.3 (7)
C9—N3—C10—C11179.7 (8)N2—C8—C15—C14−1.6 (14)
C9—N3—C10—C152.2 (9)C9—C8—C15—C101.2 (8)
Cl1—C1—C2—C3−177.9 (6)C9—C8—C15—C14177.9 (8)
C6—C1—C2—C3−0.2 (12)N3—C10—C11—C12−179.6 (7)
Cl1—C1—C6—C5177.9 (7)C15—C10—C11—C12−2.4 (12)
C2—C1—C6—C50.3 (13)N3—C10—C15—C8−2.1 (8)
C1—C2—C3—C41.3 (12)N3—C10—C15—C14−179.3 (7)
C2—C3—C4—C5−2.5 (12)C11—C10—C15—C8−179.7 (7)
C2—C3—C4—C7177.8 (8)C11—C10—C15—C143.1 (12)
C3—C4—C5—C62.6 (12)C10—C11—C12—C130.7 (12)
C7—C4—C5—C6−177.7 (8)C11—C12—C13—C140.4 (12)
C3—C4—C7—O1172.7 (8)C12—C13—C14—C150.2 (12)
C3—C4—C7—N1−10.0 (11)C13—C14—C15—C8−178.2 (8)
C5—C4—C7—O1−7.0 (12)C13—C14—C15—C10−1.9 (11)
D—H···AD—HH···AD···AD—H···A
N1—H1···O20.90 (5)1.87 (6)2.685 (9)151 (4)
N3—H3A···O1i0.911.982.798 (8)149
C11—H11···O1i0.952.553.218 (10)128
C14—H14···O2ii0.952.293.233 (9)172
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O20.90 (5)1.87 (6)2.685 (9)151 (4)
N3—H3A⋯O1i 0.911.982.798 (8)149
C11—H11⋯O1i 0.952.553.218 (10)128
C14—H14⋯O2ii 0.952.293.233 (9)172

Symmetry codes: (i) ; (ii) .

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