Literature DB >> 24523461

Real-time PCR assay for rapid detection of epidemiologically and clinically significant Mycobacterium tuberculosis Beijing genotype isolates.

Igor Mokrousov1, Anna Vyazovaya, Viacheslav Zhuravlev, Tatiana Otten, Julie Millet, Wei-Wei Jiao, A-Dong Shen, Nalin Rastogi, Boris Vishnevsky, Olga Narvskaya.   

Abstract

Mycobacterium tuberculosis Beijing genotype strains are rapidly disseminating, frequently hypervirulent, and multidrug resistant. Here, we describe a method for their rapid detection by real-time PCR that targets the specific IS6110 insertion in the dnaA-dnaN genome region. The method was evaluated with a geographically and genetically diverse collection representing areas in East Asia and the former Soviet Union in which the Beijing genotype is endemic and epidemic (i.e., major foci of its global propagation) and with clinical specimens.

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Year:  2014        PMID： 24523461      PMCID： PMC3993684          DOI： 10.1128/JCM.03193-13

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  19 in total

Review 1.  Global dissemination of the Mycobacterium tuberculosis W-Beijing family strains.

Authors:  Pablo J Bifani; Barun Mathema; Natalia E Kurepina; Barry N Kreiswirth
Journal:  Trends Microbiol       Date:  2002-01       Impact factor: 17.079

2.  PCR-based methodology for detecting multidrug-resistant strains of Mycobacterium tuberculosis Beijing family circulating in Russia.

Authors:  I Mokrousov; T Otten; A Vyazovaya; E Limeschenko; M L Filipenko; C Sola; N Rastogi; L Steklova; B Vyshnevskiy; O Narvskaya
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2003-06-03       Impact factor: 3.267

3.  Characterization of the phylogenetic distribution and chromosomal insertion sites of five IS6110 elements in Mycobacterium tuberculosis: non-random integration in the dnaA-dnaN region.

Authors:  N E Kurepina; S Sreevatsan; B B Plikaytis; P J Bifani; N D Connell; R J Donnelly; D van Sooligen; J M Musser; B N Kreiswirth
Journal:  Tuber Lung Dis       Date:  1998

4.  Genomic deletions classify the Beijing/W strains as a distinct genetic lineage of Mycobacterium tuberculosis.

Authors:  Anthony G Tsolaki; Sebastien Gagneux; Alexander S Pym; Yves-Olivier L Goguet de la Salmoniere; Barry N Kreiswirth; Dick Van Soolingen; Peter M Small
Journal:  J Clin Microbiol       Date:  2005-07       Impact factor: 5.948

5.  Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: recommendations for a standardized methodology.

Authors:  J D van Embden; M D Cave; J T Crawford; J W Dale; K D Eisenach; B Gicquel; P Hermans; C Martin; R McAdam; T M Shinnick
Journal:  J Clin Microbiol       Date:  1993-02       Impact factor: 5.948

6.  Drug-resistant tuberculosis, clinical virulence, and the dominance of the Beijing strain family in Russia.

Authors:  Francis Drobniewski; Yanina Balabanova; Vladyslav Nikolayevsky; Micheal Ruddy; Sergey Kuznetzov; Svetlana Zakharova; Alexander Melentyev; Ivan Fedorin
Journal:  JAMA       Date:  2005-06-08       Impact factor: 56.272

7.  Targeted hybridization of IS6110 fingerprints identifies the W-Beijing Mycobacterium tuberculosis strains among clinical isolates.

Authors:  Natalia Kurepina; Ekaterina Likhoshvay; Elena Shashkina; Barun Mathema; Kristin Kremer; Dick van Soolingen; Pablo Bifani; Barry N Kreiswirth
Journal:  J Clin Microbiol       Date:  2005-05       Impact factor: 5.948

8.  Application of sensitive and specific molecular methods to uncover global dissemination of the major RDRio Sublineage of the Latin American-Mediterranean Mycobacterium tuberculosis spoligotype family.

Authors:  Andrea L Gibson; Richard C Huard; Nicolaas C Gey van Pittius; Luiz Claudio Oliveira Lazzarini; Jeffrey Driscoll; Natalia Kurepina; Thierry Zozio; Christophe Sola; Silvana Miranda Spindola; Afrânio L Kritski; Daniel Fitzgerald; Kristin Kremer; Helmi Mardassi; Poonam Chitale; Jessica Brinkworth; Dario Garcia de Viedma; Brigitte Gicquel; Jean W Pape; Dick van Soolingen; Barry N Kreiswirth; Robin M Warren; Paul D van Helden; Nalin Rastogi; Philip N Suffys; Jose Lapa e Silva; John L Ho
Journal:  J Clin Microbiol       Date:  2008-01-30       Impact factor: 5.948

9.  A marked difference in pathogenesis and immune response induced by different Mycobacterium tuberculosis genotypes.

Authors:  B López; D Aguilar; H Orozco; M Burger; C Espitia; V Ritacco; L Barrera; K Kremer; R Hernandez-Pando; K Huygen; D van Soolingen
Journal:  Clin Exp Immunol       Date:  2003-07       Impact factor: 4.330

10.  Variable host-pathogen compatibility in Mycobacterium tuberculosis.

Authors:  Sebastien Gagneux; Kathryn DeRiemer; Tran Van; Midori Kato-Maeda; Bouke C de Jong; Sujatha Narayanan; Mark Nicol; Stefan Niemann; Kristin Kremer; M Cristina Gutierrez; Markus Hilty; Philip C Hopewell; Peter M Small
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-13       Impact factor: 11.205
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  7 in total

1.  Ultrafast Assessment of the Presence of a High-Risk Mycobacterium tuberculosis Strain in a Population.

Authors:  Laura Pérez-Lago; Marta Herranz; Iñaki Comas; María Jesús Ruiz-Serrano; Paula López Roa; Emilio Bouza; Darío García-de-Viedma
Journal:  J Clin Microbiol       Date:  2015-12-30       Impact factor: 5.948

2.  Simple Assay for Detection of the Central Asia Outbreak Clade of the Mycobacterium tuberculosis Beijing Genotype.

Authors:  Egor Shitikov; Anna Vyazovaya; Maja Malakhova; Andrei Guliaev; Julia Bespyatykh; Evgeniya Proshina; Oksana Pasechnik; Igor Mokrousov
Journal:  J Clin Microbiol       Date:  2019-06-25       Impact factor: 5.948

3.  Trends of Two Epidemic Multidrug-Resistant Strains of Mycobacterium tuberculosis in Argentina Disclosed by Tailored Molecular Strategy.

Authors:  Johana Monteserin; Laura Pérez-Lago; Noemí Yokobori; Roxana Paul; Sandra Rodríguez Maus; Norberto Simboli; Vegard Eldholm; Beatriz López; Darío García de Viedma; Viviana Ritacco
Journal:  Am J Trop Med Hyg       Date:  2019-12       Impact factor: 2.345

4.  Application of Deletion- Targeted Multiplex PCR technique for detection of Mycobacterium tuberculosis Beijing strains in samples from tuberculosis patients.

Authors:  Azar Dokht Khosravi; Hamed Goodarzi; Seyed Mohammad Alavi; Mohammad Reza Akhond
Journal:  Iran J Microbiol       Date:  2014-10

Review 5.  Revisiting the methods for detecting Mycobacterium tuberculosis: what has the new millennium brought thus far?

Authors:  Thales Alves Campelo; Paulo Rafael Cardoso de Sousa; Lucas de Lima Nogueira; Cristiane Cunha Frota; Paulo Renato Zuquim Antas
Journal:  Access Microbiol       Date:  2021-08-02

6.  Impact of pathobiological diversity of Mycobacterium tuberculosis on clinical features and lethal outcome of tuberculosis.

Authors:  Oksana Pasechnik; Anna Vyazovaya; Igor Mokrousov; Irina Yarusova; Alena Gerasimova; Aleksey Blokh; Viacheslav Zhuravlev
Journal:  BMC Microbiol       Date:  2022-02-08       Impact factor: 3.605

7.  Population structure of Mycobacterium tuberculosis from referral clinics in Western Siberia, Russia: Before and during the Covid-19 pandemic.

Authors:  Anna Vyazovaya; Irina Felker; Yakov Schwartz; Igor Mokrousov
Journal:  Infect Genet Evol       Date:  2022-07-24       Impact factor: 4.393
  7 in total

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