Literature DB >> 24519458

Small RNA regulators in bacteria: powerful tools for metabolic engineering and synthetic biology.

Zhen Kang1, Chuanzhi Zhang, Junli Zhang, Peng Jin, Juan Zhang, Guocheng Du, Jian Chen.   

Abstract

Small RNAs, a large class of ancient posttranscriptional regulators, have recently attracted considerable attention. A plethora of small RNAs has been identified and characterized, many of which belong to the major small noncoding RNA (sRNA) or riboswitch families. It has become increasingly clear that most small RNAs play critical regulatory roles in many processes and are, therefore, considered to be powerful tools for metabolic engineering and synthetic biology. In this review, we describe recent achievements in the identification, characterization, and application of small RNAs. We give particular attention to advances in the design and synthesis of novel sRNAs and riboswitches for metabolic engineering. In addition, a novel strategy for hierarchical control of global metabolic pathways is proposed.

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Year:  2014        PMID: 24519458     DOI: 10.1007/s00253-014-5569-y

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  22 in total

1.  The Small RNA sr8384 Is a Crucial Regulator of Cell Growth in Solventogenic Clostridia.

Authors:  Yunpeng Yang; Huan Zhang; Nannan Lang; Lu Zhang; Changsheng Chai; Huiqi He; Weihong Jiang; Yang Gu
Journal:  Appl Environ Microbiol       Date:  2020-06-17       Impact factor: 4.792

Review 2.  Target activation by regulatory RNAs in bacteria.

Authors:  Kai Papenfort; Carin K Vanderpool
Journal:  FEMS Microbiol Rev       Date:  2015-04-30       Impact factor: 16.408

Review 3.  How do base-pairing small RNAs evolve?

Authors:  Taylor B Updegrove; Svetlana A Shabalina; Gisela Storz
Journal:  FEMS Microbiol Rev       Date:  2015-04-30       Impact factor: 16.408

Review 4.  Directed evolution combined with synthetic biology strategies expedite semi-rational engineering of genes and genomes.

Authors:  Zhen Kang; Junli Zhang; Peng Jin; Sen Yang
Journal:  Bioengineered       Date:  2015-01-26       Impact factor: 3.269

5.  Design criteria for synthetic riboswitches acting on transcription.

Authors:  Manja Wachsmuth; Gesine Domin; Ronny Lorenz; Robert Serfling; Sven Findeiß; Peter F Stadler; Mario Mörl
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

6.  Development of novel metabolite-responsive transcription factors via transposon-mediated protein fusion.

Authors:  Andrew K D Younger; Peter Y Su; Andrea J Shepard; Shreya V Udani; Thaddeus R Cybulski; Keith E J Tyo; Joshua N Leonard
Journal:  Protein Eng Des Sel       Date:  2018-02-01       Impact factor: 1.650

Review 7.  Recent advances in genetic engineering tools based on synthetic biology.

Authors:  Jun Ren; Jingyu Lee; Dokyun Na
Journal:  J Microbiol       Date:  2020-01-02       Impact factor: 3.422

Review 8.  Rapid prototyping of microbial cell factories via genome-scale engineering.

Authors:  Tong Si; Han Xiao; Huimin Zhao
Journal:  Biotechnol Adv       Date:  2014-11-20       Impact factor: 14.227

Review 9.  Proteins That Chaperone RNA Regulation.

Authors:  Sarah A Woodson; Subrata Panja; Andrew Santiago-Frangos
Journal:  Microbiol Spectr       Date:  2018-07

10.  Nucleoid and cytoplasmic localization of small RNAs in Escherichia coli.

Authors:  Huanjie Sheng; Weston T Stauffer; Razika Hussein; Chris Lin; Han N Lim
Journal:  Nucleic Acids Res       Date:  2017-03-17       Impact factor: 16.971

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