Literature DB >> 24518929

Cohort Profile: Estonian Biobank of the Estonian Genome Center, University of Tartu.

Liis Leitsalu1, Toomas Haller2, Tõnu Esko3, Mari-Liis Tammesoo2, Helene Alavere2, Harold Snieder4, Markus Perola5, Pauline C Ng6, Reedik Mägi2, Lili Milani2, Krista Fischer2, Andres Metspalu7.   

Abstract

The Estonian Biobank cohort is a volunteer-based sample of the Estonian resident adult population (aged ≥18 years). The current number of participants-close to 52000--represents a large proportion, 5%, of the Estonian adult population, making it ideally suited to population-based studies. General practitioners (GPs) and medical personnel in the special recruitment offices have recruited participants throughout the country. At baseline, the GPs performed a standardized health examination of the participants, who also donated blood samples for DNA, white blood cells and plasma tests and filled out a 16-module questionnaire on health-related topics such as lifestyle, diet and clinical diagnoses described in WHO ICD-10. A significant part of the cohort has whole genome sequencing (100), genome-wide single nucleotide polymorphism (SNP) array data (20 000) and/or NMR metabolome data (11 000) available (http://www.geenivaramu.ee/for-scientists/data-release/). The data are continuously updated through periodical linking to national electronic databases and registries. A part of the cohort has been re-contacted for follow-up purposes and resampling, and targeted invitations are possible for specific purposes, for example people with a specific diagnosis. The Estonian Genome Center of the University of Tartu is actively collaborating with many universities, research institutes and consortia and encourages fellow scientists worldwide to co-initiate new academic or industrial joint projects with us.
© The Author 2014; all rights reserved. Published by Oxford University Press on behalf of the International Epidemiological Association.

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Mesh:

Year:  2014        PMID: 24518929     DOI: 10.1093/ije/dyt268

Source DB:  PubMed          Journal:  Int J Epidemiol        ISSN: 0300-5771            Impact factor:   7.196


  117 in total

1.  Cardiovascular Risk Factors and Ischemic Heart Disease: Is the Confluence of Risk Factors Greater Than the Parts? A Genetic Approach.

Authors:  Roberto Elosua; Carla Lluís-Ganella; Isaac Subirana; Aki Havulinna; Kristi Läll; Gavin Lucas; Sergi Sayols-Baixeras; Arto Pietilä; Maris Alver; Antonio Cabrera de León; Mariano Sentí; David Siscovick; Olle Mellander; Krista Fischer; Veikko Salomaa; Jaume Marrugat
Journal:  Circ Cardiovasc Genet       Date:  2016-04-21

Review 2.  Global implementation of genomic medicine: We are not alone.

Authors:  Teri A Manolio; Marc Abramowicz; Fahd Al-Mulla; Warwick Anderson; Rudi Balling; Adam C Berger; Steven Bleyl; Aravinda Chakravarti; Wasun Chantratita; Rex L Chisholm; Vajira H W Dissanayake; Michael Dunn; Victor J Dzau; Bok-Ghee Han; Tim Hubbard; Anne Kolbe; Bruce Korf; Michiaki Kubo; Paul Lasko; Erkki Leego; Surakameth Mahasirimongkol; Partha P Majumdar; Gert Matthijs; Howard L McLeod; Andres Metspalu; Pierre Meulien; Satoru Miyano; Yaakov Naparstek; P Pearl O'Rourke; George P Patrinos; Heidi L Rehm; Mary V Relling; Gad Rennert; Laura Lyman Rodriguez; Dan M Roden; Alan R Shuldiner; Sukdeb Sinha; Patrick Tan; Mats Ulfendahl; Robyn Ward; Marc S Williams; John E L Wong; Eric D Green; Geoffrey S Ginsburg
Journal:  Sci Transl Med       Date:  2015-06-03       Impact factor: 17.956

3.  Dominance genetic variation contributes little to the missing heritability for human complex traits.

Authors:  Zhihong Zhu; Andrew Bakshi; Anna A E Vinkhuyzen; Gibran Hemani; Sang Hong Lee; Ilja M Nolte; Jana V van Vliet-Ostaptchouk; Harold Snieder; Tonu Esko; Lili Milani; Reedik Mägi; Andres Metspalu; William G Hill; Bruce S Weir; Michael E Goddard; Peter M Visscher; Jian Yang
Journal:  Am J Hum Genet       Date:  2015-02-12       Impact factor: 11.025

4.  The Genetic Architecture of Gene Expression in Peripheral Blood.

Authors:  Luke R Lloyd-Jones; Alexander Holloway; Allan McRae; Jian Yang; Kerrin Small; Jing Zhao; Biao Zeng; Andrew Bakshi; Andres Metspalu; Manolis Dermitzakis; Greg Gibson; Tim Spector; Grant Montgomery; Tonu Esko; Peter M Visscher; Joseph E Powell
Journal:  Am J Hum Genet       Date:  2017-01-05       Impact factor: 11.025

5.  Genetic variants linked to education predict longevity.

Authors:  Riccardo E Marioni; Stuart J Ritchie; Peter K Joshi; Saskia P Hagenaars; Aysu Okbay; Krista Fischer; Mark J Adams; W David Hill; Gail Davies; Reka Nagy; Carmen Amador; Kristi Läll; Andres Metspalu; David C Liewald; Archie Campbell; James F Wilson; Caroline Hayward; Tõnu Esko; David J Porteous; Catharine R Gale; Ian J Deary
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-31       Impact factor: 11.205

Review 6.  Polymorphic variation in TPMT is the principal determinant of TPMT phenotype: A meta-analysis of three genome-wide association studies.

Authors:  R Tamm; R Mägi; R Tremmel; S Winter; E Mihailov; A Smid; A Möricke; K Klein; M Schrappe; M Stanulla; R Houlston; R Weinshilboum; Irena Mlinarič Raščan; A Metspalu; L Milani; M Schwab; E Schaeffeler
Journal:  Clin Pharmacol Ther       Date:  2017-02-01       Impact factor: 6.875

7.  Association of Rare Pathogenic DNA Variants for Familial Hypercholesterolemia, Hereditary Breast and Ovarian Cancer Syndrome, and Lynch Syndrome With Disease Risk in Adults According to Family History.

Authors:  Aniruddh P Patel; Minxian Wang; Akl C Fahed; Heather Mason-Suares; Deanna Brockman; Renee Pelletier; Sami Amr; Kalotina Machini; Megan Hawley; Leora Witkowski; Christopher Koch; Anthony Philippakis; Christopher A Cassa; Patrick T Ellinor; Sekar Kathiresan; Kenney Ng; Matthew Lebo; Amit V Khera
Journal:  JAMA Netw Open       Date:  2020-04-01

8.  Localizing Components of Shared Transethnic Genetic Architecture of Complex Traits from GWAS Summary Data.

Authors:  Huwenbo Shi; Kathryn S Burch; Ruth Johnson; Malika K Freund; Gleb Kichaev; Nicholas Mancuso; Astrid M Manuel; Natalie Dong; Bogdan Pasaniuc
Journal:  Am J Hum Genet       Date:  2020-05-21       Impact factor: 11.025

9.  The emerging landscape of health research based on biobanks linked to electronic health records: Existing resources, statistical challenges, and potential opportunities.

Authors:  Lauren J Beesley; Maxwell Salvatore; Lars G Fritsche; Anita Pandit; Arvind Rao; Chad Brummett; Cristen J Willer; Lynda D Lisabeth; Bhramar Mukherjee
Journal:  Stat Med       Date:  2019-12-20       Impact factor: 2.373

10.  Heterozygous mutations in natriuretic peptide receptor-B (NPR2) gene as a cause of short stature.

Authors:  Sophie R Wang; Christina M Jacobsen; Heather Carmichael; Aaron B Edmund; Jerid W Robinson; Robert C Olney; Timothy C Miller; Jennifer E Moon; Veronica Mericq; Lincoln R Potter; Matthew L Warman; Joel N Hirschhorn; Andrew Dauber
Journal:  Hum Mutat       Date:  2015-03-16       Impact factor: 4.878

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