Literature DB >> 24513106

Interaction of holoCcmE with CcmF in heme trafficking and cytochrome c biosynthesis.

Brian San Francisco, Robert G Kranz.   

Abstract

The periplasmic heme chaperone holoCcmE is essential for heme trafficking in the cytochrome c biosynthetic pathway in many bacteria, archaea, and plant mitochondria. This pathway, called system I, involves two steps: (i) formation and release of holoCcmE (by the ABC-transporter complex CcmABCD) and (ii) delivery of the heme in holoCcmE to the putative cytochrome c heme lyase complex, CcmFH. CcmFH is believed to facilitate the final covalent attachment of heme (from holoCcmE) to the apocytochrome c. Although most models for system I propose that holoCcmE delivers heme directly to CcmF, no interaction between holoCcmE and CcmF has been demonstrated. Here, a complex between holoCcmE and CcmF is “trapped”, purified, and characterized. HoloCcmE must be released from the ABC-transporter complex CcmABCD to interact with CcmF, and the holo-form of CcmE interacts with CcmF at levels at least 20-fold higher than apoCcmE. Two conserved histidines (here termed P-His1 and P-His2) in separate periplasmic loops in CcmF are required for interaction with holoCcmE, and evidence that P-His1 and P-His2 function as heme-binding ligands is presented. These results show that heme in holoCcmE is essential for complex formation with CcmF and that the heme of holoCcmE is coordinated by P-His1 and P-His2 within the WWD domain of CcmF. These features are strikingly similar to formation of the CcmC:heme:CcmE ternary complex [Richard-Fogal C, Kranz RG. The CcmC:heme:CcmE complex in heme trafficking and cytochrome c biosynthesis. J Mol Biol 2010;401:350–62] and suggest common mechanistic and structural aspects.

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Year:  2014        PMID: 24513106      PMCID: PMC3943652          DOI: 10.1016/j.jmb.2013.10.025

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  44 in total

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2.  Bacterial cytochromes c biogenesis.

Authors:  D L Beckman; D R Trawick; R G Kranz
Journal:  Genes Dev       Date:  1992-02       Impact factor: 11.361

Review 3.  Continued surprises in the cytochrome c biogenesis story.

Authors:  Elizabeth B Sawyer; Paul D Barker
Journal:  Protein Cell       Date:  2012-06-21       Impact factor: 14.870

4.  Simultaneous determination of hemes a, b, and c from pyridine hemochrome spectra.

Authors:  E A Berry; B L Trumpower
Journal:  Anal Biochem       Date:  1987-02-15       Impact factor: 3.365

5.  A bacterial cytochrome c heme lyase. CcmF forms a complex with the heme chaperone CcmE and CcmH but not with apocytochrome c.

Authors:  Qun Ren; Umesh Ahuja; Linda Thöny-Meyer
Journal:  J Biol Chem       Date:  2001-12-14       Impact factor: 5.157

6.  Import of cytochrome c into mitochondria: reduction of heme, mediated by NADH and flavin nucleotides, is obligatory for its covalent linkage to apocytochrome c.

Authors:  D W Nicholson; W Neupert
Journal:  Proc Natl Acad Sci U S A       Date:  1989-06       Impact factor: 11.205

7.  Replacement of the proximal ligand of sperm whale myoglobin with free imidazole in the mutant His-93-->Gly.

Authors:  D Barrick
Journal:  Biochemistry       Date:  1994-05-31       Impact factor: 3.162

8.  Transmutation of a heme protein.

Authors:  P D Barker; J C Ferrer; M Mylrajan; T M Loehr; R Feng; Y Konishi; W D Funk; R T MacGillivray; A G Mauk
Journal:  Proc Natl Acad Sci U S A       Date:  1993-07-15       Impact factor: 11.205

9.  Cytochromes c biogenesis in a photosynthetic bacterium requires a periplasmic thioredoxin-like protein.

Authors:  D L Beckman; R G Kranz
Journal:  Proc Natl Acad Sci U S A       Date:  1993-03-15       Impact factor: 11.205

10.  Interaction of heme with variants of the heme chaperone CcmE carrying active site mutations and a cleavable N-terminal His tag.

Authors:  Julie M Stevens; Oliver Daltrop; Christopher W Higham; Stuart J Ferguson
Journal:  J Biol Chem       Date:  2003-03-25       Impact factor: 5.157

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  12 in total

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Review 2.  Cytochrome c biogenesis System I: an intricate process catalyzed by a maturase supercomplex?

Authors:  Andreia F Verissimo; Fevzi Daldal
Journal:  Biochim Biophys Acta       Date:  2014-03-14

3.  Structurally Mapping Endogenous Heme in the CcmCDE Membrane Complex for Cytochrome c Biogenesis.

Authors:  Molly C Sutherland; Joshua M Jarodsky; Sergey Ovchinnikov; David Baker; Robert G Kranz
Journal:  J Mol Biol       Date:  2018-03-05       Impact factor: 5.469

4.  The CcmFH complex is the system I holocytochrome c synthetase: engineering cytochrome c maturation independent of CcmABCDE.

Authors:  Brian San Francisco; Molly C Sutherland; Robert G Kranz
Journal:  Mol Microbiol       Date:  2014-01-27       Impact factor: 3.501

Review 5.  Mitochondrial cytochrome c biogenesis: no longer an enigma.

Authors:  Shalon E Babbitt; Molly C Sutherland; Brian San Francisco; Deanna L Mendez; Robert G Kranz
Journal:  Trends Biochem Sci       Date:  2015-06-11       Impact factor: 13.807

6.  Exposure to synthetic gray water inhibits amoeba encystation and alters expression of Legionella pneumophila virulence genes.

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7.  AF2Complex predicts direct physical interactions in multimeric proteins with deep learning.

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Journal:  Nat Commun       Date:  2022-04-01       Impact factor: 14.919

8.  Heme Trafficking and Modifications during System I Cytochrome c Biogenesis: Insights from Heme Redox Potentials of Ccm Proteins.

Authors:  Molly C Sutherland; Joel A Rankin; Robert G Kranz
Journal:  Biochemistry       Date:  2016-05-26       Impact factor: 3.162

9.  Structure-Function Analysis of the Bifunctional CcsBA Heme Exporter and Cytochrome c Synthetase.

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Review 10.  Metal preferences and metallation.

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Journal:  J Biol Chem       Date:  2014-08-26       Impact factor: 5.157

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