Literature DB >> 24397552

The CcmFH complex is the system I holocytochrome c synthetase: engineering cytochrome c maturation independent of CcmABCDE.

Brian San Francisco1, Molly C Sutherland, Robert G Kranz.   

Abstract

Cytochrome c maturation (ccm) in many bacteria, archaea and plant mitochondria requires eight membrane proteins, CcmABCDEFGH, called system I. This pathway delivers and attaches haem covalently to two cysteines (of Cys-Xxx-Xxx-Cys-His) in the cytochrome c. All models propose that CcmFH facilitates covalent attachment of haem to the apocytochrome; namely, that it is the synthetase. However, holocytochrome c synthetase activity has not been directly demonstrated for CcmFH. We report formation of holocytochromes c by CcmFH and CcmG, a periplasmic thioredoxin, independent of CcmABCDE (we term this activity CcmFGH-only). Cytochrome c produced in the absence of CcmABCDE is indistinguishable from cytochrome c produced by the full system I, with a cleaved signal sequence and two covalent bonds to haem. We engineered increased cytochrome c production by CcmFGH-only, with yields approaching those from the full system I. Three conserved histidines in CcmF (TM-His1, TM-His2 and P-His1) are required for activity, as are the conserved cysteine pairs in CcmG and CcmH. Our findings establish that CcmFH is the system I holocytochrome c synthetase. Although we discuss why this engineering would likely not replace the need for CcmABCDE in nature, these results provide unique mechanistic and evolutionary insights into cytochrome c biosynthesis.
© 2014 John Wiley & Sons Ltd.

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Year:  2014        PMID: 24397552      PMCID: PMC3959880          DOI: 10.1111/mmi.12510

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  58 in total

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Journal:  J Biol Chem       Date:  1991-04-25       Impact factor: 5.157

3.  The Paracoccus denitrificans ccmA, B and C genes: cloning and sequencing, and analysis of the potential of their products to form a haem or apo- c-type cytochrome transporter.

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Journal:  Microbiology (Reading)       Date:  1997-02       Impact factor: 2.777

4.  Evolution and horizontal transfer of an entire biosynthetic pathway for cytochrome c biogenesis: Helicobacter, Deinococcus, Archae and more.

Authors:  B S Goldman; R G Kranz
Journal:  Mol Microbiol       Date:  1998-02       Impact factor: 3.501

5.  Molecular and immunological analysis of an ABC transporter complex required for cytochrome c biogenesis.

Authors:  B S Goldman; D L Beckman; A Bali; E M Monika; K K Gabbert; R G Kranz
Journal:  J Mol Biol       Date:  1997-05-16       Impact factor: 5.469

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Authors:  E M Monika; B S Goldman; D L Beckman; R G Kranz
Journal:  J Mol Biol       Date:  1997-09-05       Impact factor: 5.469

7.  Isolation of mutants and genes involved in cytochromes c biosynthesis in Rhodobacter capsulatus.

Authors:  R G Kranz
Journal:  J Bacteriol       Date:  1989-01       Impact factor: 3.490

8.  Transmutation of a heme protein.

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Journal:  Proc Natl Acad Sci U S A       Date:  1993-07-15       Impact factor: 11.205

9.  Cytochromes c biogenesis in a photosynthetic bacterium requires a periplasmic thioredoxin-like protein.

Authors:  D L Beckman; R G Kranz
Journal:  Proc Natl Acad Sci U S A       Date:  1993-03-15       Impact factor: 11.205

10.  Interaction of holoCcmE with CcmF in heme trafficking and cytochrome c biosynthesis.

Authors:  Brian San Francisco; Robert G Kranz
Journal:  J Mol Biol       Date:  2014-02-06       Impact factor: 5.469

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  10 in total

1.  The thioreduction component CcmG confers efficiency and the heme ligation component CcmH ensures stereo-specificity during cytochrome c maturation.

Authors:  Andreia F Verissimo; Bahia Khalfaoui-Hassani; Josephine Hwang; Stefan Steimle; Nur Selamoglu; Carsten Sanders; Camilo E Khatchikian; Fevzi Daldal
Journal:  J Biol Chem       Date:  2017-06-20       Impact factor: 5.157

2.  Structurally Mapping Endogenous Heme in the CcmCDE Membrane Complex for Cytochrome c Biogenesis.

Authors:  Molly C Sutherland; Joshua M Jarodsky; Sergey Ovchinnikov; David Baker; Robert G Kranz
Journal:  J Mol Biol       Date:  2018-03-05       Impact factor: 5.469

Review 3.  Mitochondrial cytochrome c biogenesis: no longer an enigma.

Authors:  Shalon E Babbitt; Molly C Sutherland; Brian San Francisco; Deanna L Mendez; Robert G Kranz
Journal:  Trends Biochem Sci       Date:  2015-06-11       Impact factor: 13.807

4.  AF2Complex predicts direct physical interactions in multimeric proteins with deep learning.

Authors:  Mu Gao; Davi Nakajima An; Jerry M Parks; Jeffrey Skolnick
Journal:  Nat Commun       Date:  2022-04-01       Impact factor: 14.919

5.  Heme Trafficking and Modifications during System I Cytochrome c Biogenesis: Insights from Heme Redox Potentials of Ccm Proteins.

Authors:  Molly C Sutherland; Joel A Rankin; Robert G Kranz
Journal:  Biochemistry       Date:  2016-05-26       Impact factor: 3.162

6.  Photoferrotrophs Produce a PioAB Electron Conduit for Extracellular Electron Uptake.

Authors:  Dinesh Gupta; Molly C Sutherland; Karthikeyan Rengasamy; J Mark Meacham; Robert G Kranz; Arpita Bose
Journal:  mBio       Date:  2019-11-05       Impact factor: 7.867

7.  Architecture of the membrane-bound cytochrome c heme lyase CcmF.

Authors:  Anton Brausemann; Lin Zhang; Lorena Ilcu; Oliver Einsle
Journal:  Nat Chem Biol       Date:  2021-05-06       Impact factor: 15.040

8.  Cryo-EM of CcsBA reveals the basis for cytochrome c biogenesis and heme transport.

Authors:  Deanna L Mendez; Ethan P Lowder; Dustin E Tillman; Molly C Sutherland; Andrea L Collier; Michael J Rau; James A J Fitzpatrick; Robert G Kranz
Journal:  Nat Chem Biol       Date:  2021-12-20       Impact factor: 16.174

9.  A de novo peroxidase is also a promiscuous yet stereoselective carbene transferase.

Authors:  Richard Stenner; Jack W Steventon; Annela Seddon; J L Ross Anderson
Journal:  Proc Natl Acad Sci U S A       Date:  2020-01-02       Impact factor: 11.205

10.  Maize PPR278 Functions in Mitochondrial RNA Splicing and Editing.

Authors:  Jing Yang; Yang Cui; Xiangbo Zhang; Zhijia Yang; Jinsheng Lai; Weibin Song; Jingang Liang; Xinhai Li
Journal:  Int J Mol Sci       Date:  2022-03-11       Impact factor: 5.923

  10 in total

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