Literature DB >> 24513105

Spontaneous aggregation of the insulin-derived steric zipper peptide VEALYL results in different aggregation forms with common features.

Dirk Matthes, Venita Daebel, Karsten Meyenberg, Dietmar Riedel, Gudrun Heim, Ulf Diederichsen, Adam Lange, Bert L de Groot.   

Abstract

Recently, several short peptides have been shown to self-assemble into amyloid fibrils with generic cross-β spines, so-called steric zippers, suggesting common underlying structural features and aggregation mechanisms. Understanding these mechanisms is a prerequisite for designing fibril-binding compounds and inhibitors of fibril formation. The hexapeptide VEALYL, corresponding to the residues B12-17 of full-length insulin, has been identified as one of these short segments. Here, we analyzed the structures of multiple, morphologically different (fibrillar, microcrystal-like, oligomeric) [(13)C,(15)N]VEALYL samples by solid-state nuclear magnetic resonance complemented with results from molecular dynamics simulations. By performing NHHC/CHHC experiments, we could determine that the β-strands within a given sheet of the amyloid-like fibrils formed by the insulin hexapeptide VEALYL are stacked in an antiparallel manner, whereas the sheet-to-sheet packing arrangement was found to be parallel. Experimentally observed secondary chemical shifts for all aggregate forms, as well as Ø and ψ backbone torsion angles calculated with TALOS, are indicative of β-strand conformation, consistent with the published crystal structure (PDB ID: 2OMQ). Thus, we could demonstrate that the structural features of all the observed VEALYL aggregates are in agreement with the previously observed homosteric zipper spine packing in the crystalline state, suggesting that several distinct aggregate morphologies share the same molecular architecture.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 24513105     DOI: 10.1016/j.jmb.2013.10.020

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  6 in total

1.  Injection of insulin amyloid fibrils in the hippocampus of male Wistar rats: report on memory impairment and formation of amyloid plaques.

Authors:  Raheleh Kheirbakhsh; Maryam Chinisaz; Saeed Khodayari; Saeid Amanpour; Ahmad-Reza Dehpour; Ahad Muhammadnejad; Bagher Larijani; Azadeh Ebrahim-Habibi
Journal:  Neurol Sci       Date:  2015-03-19       Impact factor: 3.307

2.  Unraveling VEALYL Amyloid Formation Using Advanced Vibrational Spectroscopy and Microscopy.

Authors:  Steven J Roeters; Mathias Sawall; Carl E Eskildsen; Matthijs R Panman; Gergely Tordai; Mike Koeman; Klaus Neymeyr; Jeroen Jansen; Age K Smilde; Sander Woutersen
Journal:  Biophys J       Date:  2020-06-03       Impact factor: 4.033

3.  Inhibition of Insulin Amyloid Fibrillation by a Novel Amphipathic Heptapeptide: MECHANISTIC DETAILS STUDIED BY SPECTROSCOPY IN COMBINATION WITH MICROSCOPY.

Authors:  Bhisma N Ratha; Anirban Ghosh; Jeffrey R Brender; Nilanjan Gayen; Humaira Ilyas; Chilukoti Neeraja; Kali P Das; Atin K Mandal; Anirban Bhunia
Journal:  J Biol Chem       Date:  2016-09-27       Impact factor: 5.157

Review 4.  Information flow and protein dynamics: the interplay between nuclear magnetic resonance spectroscopy and molecular dynamics simulations.

Authors:  Nina Pastor; Carlos Amero
Journal:  Front Plant Sci       Date:  2015-05-05       Impact factor: 5.753

5.  Amyloids in solid-state nuclear magnetic resonance: potential causes of the usually low resolution.

Authors:  Alba Espargaró; Maria Antònia Busquets; Joan Estelrich; Raimon Sabate
Journal:  Int J Nanomedicine       Date:  2015-11-09

6.  An Atomistic View of Amyloidogenic Self-assembly: Structure and Dynamics of Heterogeneous Conformational States in the Pre-nucleation Phase.

Authors:  Dirk Matthes; Vytautas Gapsys; Julian T Brennecke; Bert L de Groot
Journal:  Sci Rep       Date:  2016-09-12       Impact factor: 4.379

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.