Literature DB >> 24509315

Plasmid conjugation from proteobacteria as evidence for the origin of xenologous genes in cyanobacteria.

David Encinas1, M Pilar Garcillán-Barcia, María Santos-Merino, Luis Delaye, Andrés Moya, Fernando de la Cruz.   

Abstract

Comparative genomics have shown that 5% of Synechococcus elongatus PCC 7942 genes are of probable proteobacterial origin. To investigate the role of interphylum conjugation in cyanobacterial gene acquisition, we tested the ability of a set of prototype proteobacterial conjugative plasmids (RP4, pKM101, R388, R64, and F) to transfer DNA from Escherichia coli to S. elongatus. A series of BioBrick-compatible, mobilizable shuttle vectors was developed. These vectors were based on the putative origin of replication of the Synechococcus resident plasmid pANL. Not only broad-host-range plasmids, such as RP4 and R388, but also narrower-host-range plasmids, such as pKM101, all encoding MPFT-type IV secretion systems, were able to transfer plasmid DNA from E. coli to S. elongatus by conjugation. Neither MPFF nor MPFI could be used as interphylum DNA delivery agents. Reciprocally, pANL-derived cointegrates could be introduced in E. coli by electroporation, where they conferred a functional phenotype. These results suggest the existence of potentially ample channels of gene flow between proteobacteria and cyanobacteria and point to MPFT-based interphylum conjugation as a potential mechanism to explain the proteobacterial origin of a majority of S. elongatus xenologous genes.

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Year:  2014        PMID: 24509315      PMCID: PMC3993370          DOI: 10.1128/JB.01464-13

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  58 in total

1.  Gene replacement in cyanobacteria mediated by a dominant streptomycin-sensitive rps12 gene that allows selection of mutants free from drug resistance markers.

Authors:  Masayoshi Matsuoka; Kazutaka Takahama; Takahira Ogawa
Journal:  Microbiology       Date:  2001-08       Impact factor: 2.777

2.  A new method for construction of Ti plasmid-less strains in Agrobacterium tumefaciens.

Authors:  M Uraji; K Suzuki; K Yoshida
Journal:  Nucleic Acids Res Suppl       Date:  2001

3.  Determination of conjugation rates on solid surfaces.

Authors:  Irene del Campo; Raúl Ruiz; Ana Cuevas; Carlos Revilla; Luis Vielva; Fernando de la Cruz
Journal:  Plasmid       Date:  2012-01-24       Impact factor: 3.466

4.  The genome of S-PM2, a "photosynthetic" T4-type bacteriophage that infects marine Synechococcus strains.

Authors:  Nicholas H Mann; Martha R J Clokie; Andrew Millard; Annabel Cook; William H Wilson; Peter J Wheatley; Andrey Letarov; H M Krisch
Journal:  J Bacteriol       Date:  2005-05       Impact factor: 3.490

5.  Bacterial conjugative plasmids mobilize DNA transfer between bacteria and yeast.

Authors:  J A Heinemann; G F Sprague
Journal:  Nature       Date:  1989-07-20       Impact factor: 49.962

6.  Transfer of a genetic marker from a megaplasmid of Anabaena sp. strain PCC 7120 to a megaplasmid of a different Anabaena strain.

Authors:  A M Muro-Pastor; T Kuritz; E Flores; A Herrero; C P Wolk
Journal:  J Bacteriol       Date:  1994-02       Impact factor: 3.490

7.  PilV adhesins of plasmid R64 thin pili specifically bind to the lipopolysaccharides of recipient cells.

Authors:  Akiko Ishiwa; Teruya Komano
Journal:  J Mol Biol       Date:  2004-10-22       Impact factor: 5.469

8.  A genetic manipulation system for oceanic cyanobacteria of the genus Synechococcus.

Authors:  B Brahamsha
Journal:  Appl Environ Microbiol       Date:  1996-05       Impact factor: 4.792

9.  Conjugative DNA transfer induces the bacterial SOS response and promotes antibiotic resistance development through integron activation.

Authors:  Zeynep Baharoglu; David Bikard; Didier Mazel
Journal:  PLoS Genet       Date:  2010-10-21       Impact factor: 5.917

10.  Blueprint for a minimal photoautotrophic cell: conserved and variable genes in Synechococcus elongatus PCC 7942.

Authors:  Luis Delaye; Carmen M González-Domenech; María P Garcillán-Barcia; Juli Peretó; Fernando de la Cruz; Andrés Moya
Journal:  BMC Genomics       Date:  2011-01-12       Impact factor: 3.969

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  5 in total

1.  Identification of Xenologs and Their Characteristic Low Expression Levels in the Cyanobacterium Synechococcus elongatus.

Authors:  Gilberto Álvarez-Canales; Guadalupe Arellano-Álvarez; Carmen M González-Domenech; Fernando de la Cruz; Andrés Moya; Luis Delaye
Journal:  J Mol Evol       Date:  2015-06-04       Impact factor: 2.395

2.  Host Range of the Conjugative Transfer System of IncP-9 Naphthalene-Catabolic Plasmid NAH7 and Characterization of Its oriT Region and Relaxase.

Authors:  Kouhei Kishida; Kei Inoue; Yoshiyuki Ohtsubo; Yuji Nagata; Masataka Tsuda
Journal:  Appl Environ Microbiol       Date:  2016-12-15       Impact factor: 4.792

3.  Atypical integrative element with strand-biased circularization activity assists interspecies antimicrobial resistance gene transfer from Vibrio alfacsensis.

Authors:  Lisa Nonaka; Michiaki Masuda; Hirokazu Yano
Journal:  PLoS One       Date:  2022-08-02       Impact factor: 3.752

Review 4.  Genomics of microbial plasmids: classification and identification based on replication and transfer systems and host taxonomy.

Authors:  Masaki Shintani; Zoe K Sanchez; Kazuhide Kimbara
Journal:  Front Microbiol       Date:  2015-03-31       Impact factor: 5.640

5.  The genomic diversification of the whole Acinetobacter genus: origins, mechanisms, and consequences.

Authors:  Marie Touchon; Jean Cury; Eun-Jeong Yoon; Lenka Krizova; Gustavo C Cerqueira; Cheryl Murphy; Michael Feldgarden; Jennifer Wortman; Dominique Clermont; Thierry Lambert; Catherine Grillot-Courvalin; Alexandr Nemec; Patrice Courvalin; Eduardo P C Rocha
Journal:  Genome Biol Evol       Date:  2014-10-13       Impact factor: 3.416

  5 in total

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