| Literature DB >> 24506804 |
Antonia Albers1, Serhiy Demeshko, Sebastian Dechert, Caroline T Saouma, James M Mayer, Franc Meyer.
Abstract
Rieske cofactors have a [2Fe-2S] cluster with unique {Entities:
Mesh:
Substances:
Year: 2014 PMID: 24506804 PMCID: PMC3985845 DOI: 10.1021/ja412449v
Source DB: PubMed Journal: J Am Chem Soc ISSN: 0002-7863 Impact factor: 15.419
Figure 1The first (and so far only) structural Rieske model 1 (left) and functional homoleptic Rieske models 2, 3, and 4 offering the possibility of protonation at the backside of the N-ligand (right).
Figure 2Square scheme of protonation and reduction reactions involving [2Fe–2S] Rieske model 5. The subscripts denote the {N2}- and {S2]-ligated Fe sites.
Figure 3Left: schematic view of diferric cluster 52–. Right: molecular structure of the anion of (CoCp*2)25 in the crystal (thermal displacement ellipsoids set at 30% probability). For clarity all hydrogen atoms have been omitted.
Selected Bond Lengths (Å) and Angles (deg) of Diferric Clusters (CoCp*2)25 and (NEt4)25H, Mixed-Valent (NEt4)35, and Biological Rieske Clusters[17−19],a
| (CoCp*2)2 | (NEt4) | (NEt4)3 | SOFX[ | RIE[ | RFS[ | |
|---|---|---|---|---|---|---|
| 2.687(1) | 2.694(1) | 2.682(1) | 2.719 | 2.71 | 2.72 | |
| 2.191(1)/2.205(1) | 2.189(1)/2.194(1) | 2.241(2)/2.248(1) | 2.258/2.259 | 2.23/2.25 | 2.28/2.31 | |
| 2.200(2)/2.206(2) | 2.200(1)/2.216(1) | 2.210(2)/2.212(2) | 2.267/2.263 | 2.24/2.25 | 2.35/2.34 | |
| 1.984(4)/1.988(4) | 1.985(2)/1.988(2) | 2.057(4)/2.074(4) | 2.100/2.083 | 2.13/2.16 | 2.19/2.23 | |
| 2.22(2)/2.44(2), 2.37(2)/2.17(2) | 2.297(1)/2.298(1) | 2.335(2)/2.345 (2) | 2.348/2.332 | 2.22/2.29 | 2.24/2.31 | |
| ∠(N–FeN–N) | 91.65(16) | 92.61(10) | 86.65(17) | 92.12 | 90.78 | 90.52 |
| ∠(S–FeS–S) | 102.8(6)/106.8(5) | 104.45(3) | 102.23(6) | 109.73 | 105.61 | 110.19 |
| ∠(μS–FeN–μ-S) | 104.88(6) | 104.90(3) | 104.68(6) | 106.24 | 105.62 | 109.14 |
| ∠(μS–FeS–μ-S) | 104.57(6) | 103.80(3) | 106.95(6) | 105.81 | 105.64 | 105.70 |
SOFX = Rieske protein II from Sulfolobus acidocaldarius, RIE = soluble domain of Rieske protein from bovine mitochondrial bc1 complex, and RFS = soluble domain of Rieske protein from spinach chloroplast b6f complex.
Disordered {S2} ligand (see the Supporting Information for details); the true FeS–S bond length likely is an average value, 2.30 Å.
Figure 4Left: addition of 0.5 (dark blue) and 1.0 (blue) equiv of 2,6-DMPH(BF4) to 52– (black) in MeCN at −20 °C, generating 5H–. Right: further addition of 0.5 (purple) and 1.0 (red) equiv of 2,6-DMPH(BF4) to 5H– (blue), generating 5H2.
Figure 5Protonation of diferric 52– leading to the reversible formation of 5H– and 5H2. Lower right: molecular structure of the anion of (NEt4)5H·2DMF·Et2O in the crystal (thermal displacement ellipsoids set at 30% probability). For clarity all hydrogen atoms except the N–H atoms, which are hydrogen bonded to the two DMF molecules, have been omitted.
Figure 6Left: cyclic voltammogram of 52– (c = 1.0 mM) in MeCN/0.1 M Bu4NPF6 at rt vs Fc/Fc+. E1 = −1.43 V and E2 = −2.19 V at various scan rates (v = 100, 200, 300, 500, and 1000 mV s–1). Right: electrochemical reduction of 52– in MeCN/0.1 M Bu4NPF6 at rt at a potential of −1.6 V. The course of reduction was followed by UV–vis spectroscopy.
Figure 7EPR spectrum of 53– in MeCN/0.1 M Bu4NPF6 measured as frozen glass at 20 K. The red line is a powder simulation with g = 2.017, 1.934, and 1.854 and Gaussian line widths Γ = 8.5, 14, and 26 G.
EPR Data of Model Complexes 53–, 13–, and 43– and Selected Rieske Proteins[25−27],a
| ISP | Cyt | |||||
|---|---|---|---|---|---|---|
| 2.017 | 2.015 | 2.015 | 2.02 | 2.024 | 2.03 | |
| 1.934 | 1.936 | 1.937 | 1.90 | 1.89 | 1.90 | |
| 1.854 | 1.803 | 1.900 | 1.80 | 1.79 | 1.76 | |
| 1.935 | 1.918 | 1.951 | 1.91 | 1.90 | 1.90 |
Tt = Rieske protein of Thermus thermophilus, ISP bc1 = bovine mitochondrial Cyt bc1, and Cyt b6f = cytochrome b6f complex from spinach.
Figure 8Overlay of the molecular structures of diferric 52– (red), mixed-valent 53– (blue), and protonated diferric 5H– (yellow).
Figure 9Zero-field Mössbauer spectra of solid (NEt4)25 (left) and (CoCp*)(NEt4)25 (right) at 80 K. Simulation of the data gave the following parameters: (left) δ1 = 0.26 mm s–1 and ΔEQ1 = 0.52 mm s–1 (red), δ2 = 0.28 mm s–1 and ΔEQ2 = 1.16 mm s–1 (blue); (right) δ1 = 0.35 mm s–1 and ΔEQ1 = 1.26 mm s–1 (red), δ2 = 0.69 mm s–1 and ΔEQ2 = 3.23 mm s–1 (blue).
Mössbauer Parameters (mm s–1) of (CoCp*2)(NEt4)25 and Biological Rieske Clusters in the Reduced Statea
| (CoCp*2)(NEt4)2 | ISP,[ | T4MOC,[ | ||
|---|---|---|---|---|
| δ1 | 0.34 | 0.31 | 0.25 | 0.30 |
| δ2 | 0.70 | 0.74 | 0.73 | 0.72 |
| Δ | 1.29 | 0.63 | 0.70 | 0.71 |
| Δ | 3.24 | 3.05 | 2.95 | 3.07 |
| Δδ | 0.36 | 0.43 | 0.48 | 0.42 |
Tt = Rieske protein of Thermus thermophilus, ISP = Rieske protein of Cyt bf complex from spinach, and T4MOC = Rieske protein from Pseudomonas mendocina in Escherichia coli.
Figure 10Cyclic voltammogram of (NEt4)25 (c = 1.0 mM) in MeCN/0.1 M Bu4NPF6 at rt vs Fc/Fc+ at a scan rate of 500 mV/s (top). The redox potential is shifted upon addition of acid (second and third pictures from top). Subsequent addition of t-BuP2 proves the reversibility of the process (bottom).
Figure 11Square scheme summarizing thermodynamic parameters for the second-generation Rieske model cluster in MeCN with potentials referenced against Fc/Fc+.
Thermodynamic and Kinetic Parameters for the Reactions of TEMPO with 3H2–, 4H2–, and 5H2–
| Δ | 17.6 ± 0.6 | 6.7 ± 1.3 | 8.7 ± 1.0 |
| Δ | –130 ± 2 | –159 ± 10 | –120 ± 5 |
| 722 ± 14 | 2200 ± 350 | 95000 ± 12000 | |
| Δ | 55.7 ± 1.1 | 54.0 ± 1.2 | 43.8 ± 0.3 |
| BDFE(Fe–H) (kJ mol–1) | 253 ± 4 | 252 ± 2 | |
| Δ | –25.1 | –26.4 |
At 25 °C.