Literature DB >> 24496012

The evolution of phenotypic switching in subdivided populations.

Oana Carja1, Uri Liberman, Marcus W Feldman.   

Abstract

Stochastic switching is an example of phenotypic bet hedging, where offspring can express a phenotype different from that of their parents. Phenotypic switching is well documented in viruses, yeast, and bacteria and has been extensively studied when the selection pressures vary through time. However, there has been little work on the evolution of phenotypic switching under both spatially and temporally fluctuating selection pressures. Here we use a population genetic model to explore the interaction of temporal and spatial variation in determining the evolutionary dynamics of phenotypic switching. We find that the stable switching rate is mainly determined by the rate of environmental change and the migration rate. This stable rate is also a decreasing function of the recombination rate, although this is a weaker effect than those of either the period of environmental change or the migration rate. This study highlights the interplay of spatial and temporal environmental variability, offering new insights into how migration can influence the evolution of phenotypic switching rates, mutation rates, or other sources of phenotypic variation.

Entities:  

Keywords:  evolution in fluctuating environments; metapopulation and migration; stochastic gene expression variation; stochastic switching

Mesh:

Year:  2014        PMID: 24496012      PMCID: PMC3982689          DOI: 10.1534/genetics.114.161364

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  29 in total

Review 1.  Bet-hedging--a triple trade-off between means, variances and correlations.

Authors:  Jostein Starrfelt; Hanna Kokko
Journal:  Biol Rev Camb Philos Soc       Date:  2012-03-10

2.  Stochastic gene expression in fluctuating environments.

Authors:  Mukund Thattai; Alexander van Oudenaarden
Journal:  Genetics       Date:  2004-05       Impact factor: 4.562

3.  Bacterial persistence as a phenotypic switch.

Authors:  Nathalie Q Balaban; Jack Merrin; Remy Chait; Lukasz Kowalik; Stanislas Leibler
Journal:  Science       Date:  2004-08-12       Impact factor: 47.728

4.  On the evolution of mutation in changing environments: recombination and phenotypic switching.

Authors:  Uri Liberman; Jeremy Van Cleve; Marcus W Feldman
Journal:  Genetics       Date:  2011-01-06       Impact factor: 4.562

5.  Phenotypic diversity, population growth, and information in fluctuating environments.

Authors:  Edo Kussell; Stanislas Leibler
Journal:  Science       Date:  2005-08-25       Impact factor: 47.728

Review 6.  Phenotypic variation in bacteria: the role of feedback regulation.

Authors:  Wiep Klaas Smits; Oscar P Kuipers; Jan-Willem Veening
Journal:  Nat Rev Microbiol       Date:  2006-04       Impact factor: 60.633

Review 7.  Bistability, epigenetics, and bet-hedging in bacteria.

Authors:  Jan-Willem Veening; Wiep Klaas Smits; Oscar P Kuipers
Journal:  Annu Rev Microbiol       Date:  2008       Impact factor: 15.500

8.  Predicting stochastic gene expression dynamics in single cells.

Authors:  Jerome T Mettetal; Dale Muzzey; Juan M Pedraza; Ertugrul M Ozbudak; Alexander van Oudenaarden
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-28       Impact factor: 11.205

9.  Individual histories and selection in heterogeneous populations.

Authors:  Stanislas Leibler; Edo Kussell
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-02       Impact factor: 11.205

10.  Evolution of stress response in the face of unreliable environmental signals.

Authors:  Markus Arnoldini; Rafal Mostowy; Sebastian Bonhoeffer; Martin Ackermann
Journal:  PLoS Comput Biol       Date:  2012-08-16       Impact factor: 4.475

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  9 in total

1.  Evolution in changing environments: modifiers of mutation, recombination, and migration.

Authors:  Oana Carja; Uri Liberman; Marcus W Feldman
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-26       Impact factor: 11.205

Review 2.  Experimental Design, Population Dynamics, and Diversity in Microbial Experimental Evolution.

Authors:  Bram Van den Bergh; Toon Swings; Maarten Fauvart; Jan Michiels
Journal:  Microbiol Mol Biol Rev       Date:  2018-07-25       Impact factor: 11.056

3.  The role of migration in the evolution of phenotypic switching.

Authors:  Oana Carja; Robert E Furrow; Marcus W Feldman
Journal:  Proc Biol Sci       Date:  2014-11-07       Impact factor: 5.349

Review 4.  Empirical evidence for epigenetic inheritance driving evolutionary adaptation.

Authors:  Dragan Stajic; Lars E T Jansen
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2021-04-19       Impact factor: 6.671

5.  Evolution of epigenetic transmission when selection acts on fecundity versus viability.

Authors:  Bram Kuijper; Rufus A Johnstone
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2021-04-19       Impact factor: 6.671

Review 6.  Individuality, phenotypic differentiation, dormancy and 'persistence' in culturable bacterial systems: commonalities shared by environmental, laboratory, and clinical microbiology.

Authors:  Douglas Kell; Marnie Potgieter; Etheresia Pretorius
Journal:  F1000Res       Date:  2015-07-01

7.  Adaptation is influenced by the complexity of environmental change during evolution in a dynamic environment.

Authors:  Sébastien Boyer; Lucas Hérissant; Gavin Sherlock
Journal:  PLoS Genet       Date:  2021-01-25       Impact factor: 5.917

8.  Memory shapes microbial populations.

Authors:  Chaitanya S Gokhale; Stefano Giaimo; Philippe Remigi
Journal:  PLoS Comput Biol       Date:  2021-10-01       Impact factor: 4.475

9.  Epigenetic switching as a strategy for quick adaptation while attenuating biochemical noise.

Authors:  Mariana Gómez-Schiavon; Nicolas E Buchler
Journal:  PLoS Comput Biol       Date:  2019-10-28       Impact factor: 4.475

  9 in total

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