Literature DB >> 24485540

An injection molded microchip for nucleic acid purification from 25 microliter samples using isotachophoresis.

L A Marshall1, A Rogacs2, C D Meinhart3, J G Santiago4.   

Abstract

We present a novel microchip device for purification of nucleic acids from 25μL biological samples using isotachophoresis (ITP). The device design incorporates a custom capillary barrier structure to facilitate robust sample loading. The chip uses a 2mm channel width and 0.15mm depth to reduce processing time, mitigate Joule heating, and achieve high extraction efficiency. To reduce pH changes in the device due to electrolysis, we incorporated a buffering reservoir physically separated from the sample output reservoir. To reduce dispersion of the ITP-focused zone, we used optimized turn geometries. The chip was fabricated by injection molding PMMA and COC plastics through a commercial microfluidic foundry. The extraction efficiency of nucleic acids from the device was measured using fluorescent quantification, and an average recovery efficiency of 81% was achieved for nucleic acid masses between 250pg and 250ng. The devices were also used to purify DNA from whole blood, and the extracted DNA was amplified using qPCR to show the PCR compatibility of the purified sample.
Copyright © 2014 Elsevier B.V. All rights reserved.

Keywords:  Device design; Isotachophoresis; Microfluidic; Nucleic acids; Sample preparation

Mesh:

Substances:

Year:  2014        PMID: 24485540     DOI: 10.1016/j.chroma.2014.01.036

Source DB:  PubMed          Journal:  J Chromatogr A        ISSN: 0021-9673            Impact factor:   4.759


  8 in total

1.  Simultaneous RNA purification and size selection using on-chip isotachophoresis with an ionic spacer.

Authors:  Crystal M Han; David Catoe; Sarah A Munro; Ruba Khnouf; Michael P Snyder; Juan G Santiago; Marc L Salit; Can Cenik
Journal:  Lab Chip       Date:  2019-07-22       Impact factor: 6.799

2.  Nucleic acid sample preparation from whole blood in a paper microfluidic device using isotachophoresis.

Authors:  Benjamin P Sullivan; Andrew T Bender; Duy N Ngyuen; Jane Yuqian Zhang; Jonathan D Posner
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2020-12-13       Impact factor: 3.205

Review 3.  Point-of-Care HIV Viral Load Testing: an Essential Tool for a Sustainable Global HIV/AIDS Response.

Authors:  Paul K Drain; Jienchi Dorward; Andrew Bender; Lorraine Lillis; Francesco Marinucci; Jilian Sacks; Anna Bershteyn; David S Boyle; Jonathan D Posner; Nigel Garrett
Journal:  Clin Microbiol Rev       Date:  2019-05-15       Impact factor: 26.132

Review 4.  Isotachophoresis: Theory and Microfluidic Applications.

Authors:  Ashwin Ramachandran; Juan G Santiago
Journal:  Chem Rev       Date:  2022-06-22       Impact factor: 72.087

5.  One-Step Nucleic Acid Purification and Noise-Resistant Polymerase Chain Reaction by Electrokinetic Concentration for Ultralow-Abundance Nucleic Acid Detection.

Authors:  Wei Ouyang; Jongyoon Han
Journal:  Angew Chem Int Ed Engl       Date:  2020-04-30       Impact factor: 15.336

6.  HIV detection from human serum with paper-based isotachophoretic RNA extraction and reverse transcription recombinase polymerase amplification.

Authors:  Andrew T Bender; Benjamin P Sullivan; Jane Y Zhang; David C Juergens; Lorraine Lillis; David S Boyle; Jonathan D Posner
Journal:  Analyst       Date:  2021-05-04       Impact factor: 5.227

7.  Focusing analytes from 50 μL into 500 pL: On-chip focusing from large sample volumes using isotachophoresis.

Authors:  Xander F van Kooten; Marianna Truman-Rosentsvit; Govind V Kaigala; Moran Bercovici
Journal:  Sci Rep       Date:  2017-09-05       Impact factor: 4.379

Review 8.  Towards Multiplex Molecular Diagnosis-A Review of Microfluidic Genomics Technologies.

Authors:  Ismail Hussain Kamal Basha; Eric Tatt Wei Ho; Caffiyar Mohamed Yousuff; Nor Hisham Bin Hamid
Journal:  Micromachines (Basel)       Date:  2017-08-30       Impact factor: 2.891

  8 in total

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