| Literature DB >> 24470868 |
Houshang Rafatpanah1, Farhad Fathimoghadam2, Majid Shahabi3, Iman Eftekharzadeh2, Mohammadreza Hedayati-Moghaddam2, Narges Valizadeh4, Mohsen Tadayon5, Seyyed Aliakbar Shamsian2, Hamidreza Bidkhori2, Raheleh Miri2, Ali Bazarbachi6.
Abstract
OBJECTIVE(S): Although HTLV-I infection is endemic in different geographical parts of the world including Northeast of Iran, there have been no documents of HTLV-II infection in this region. It is reported that one possible reason for seroindeterminate state in HTLV western blot is HTLV-II virus. This study aimed to investigate the presence of HTLV-II among blood donors with seroindeterminate western blot results.Entities:
Keywords: HTLV-I; HTLV-II; Iran; Mashhad; PCR; Seroindeterminate; Western blot
Year: 2013 PMID: 24470868 PMCID: PMC3881255
Source DB: PubMed Journal: Iran J Basic Med Sci ISSN: 2008-3866 Impact factor: 2.699
Figure 1Different WB interpretations among the study samples
Specific primers designed for TAX and LTR regions
| Name | Sequence(5-3) | Position | Amplicon (base pair) |
|---|---|---|---|
| Taxf | AGGGTTTGGACAGAGTCTT | ||
| Taxr | AAGGACCTTGAGGGTCTTA | 7335-7590 | 256 Bp |
| LTRf | CATAAGCTCAGACCTCCGGG | ||
| LTRr | GGATGGCGGCCTCAGGTAGG | 8107-8330 | 224 Bp |
Inner and outer specific primers designed for TAX and LTR regions used in the nested PCR
| Name | Sequence(5’-3’) | Position | Genbank | Amplicon(Base pair) | |
|---|---|---|---|---|---|
| First set | LTR 2F1 | CTAGCCTCCCAAGCCAGCCACC | 13-878 | M10060 | Outer 866 bp |
| Second set | LTR2 F2 | CGAGTCATCGACCCAAAAGGTC | 40-838 | Inner 799 bp | |
| First set | tax2 F1 | TGGATACCCCGTCTACGTGT | 7248-7406 | 0uter 159bp | |
| Second set | tax2 F2 | CTACGTGTTTGGCGATTGTGTAC | 7260-7402 | Inner 143bp |
Frequency of blood groups among WB indeterminate individuals
| Blood group | Number | % |
|---|---|---|
| A+ | 9 | 18.8 |
| B+ | 16 | 33.2 |
| O+ | 17 | 35.4 |
| AB+ | 2 | 4.2 |
| A- | 2 | 4.2 |
| B- | 1 | 2.1 |
| O- | 1 | 2.1 |
| AB- | 0 | 0 |
The frequency of Different WB indeterminate patterns among samples (n=44)
| WB indeterminate pattern | Number | % |
|---|---|---|
| Rgp46-I | 7 | 15.9 |
| Rgp46-II | 12 | 27.3 |
| Rgp46-I,P24,GD21 | 2 | 4.5 |
| GP21 | 5 | 11.4 |
| Rgp46-I, GD21 | 7 | 15.9 |
| GD21 | 6 | 13.6 |
| Rgp46-II, GD21 | 2 | 4.5 |
| P24, GD21 | 1 | 2.3 |
| Rgp46-I, GD21, GP21 | 1 | 2.3 |
| P53 | 1 | 2.3 |