Literature DB >> 24468446

Functional DNA nanomaterials for sensing and imaging in living cells.

Seyed-Fakhreddin Torabi1, Yi Lu2.   

Abstract

Recent developments in integrating high selectivity of functional DNA, such as DNAzymes and aptamers, with efficient DNA delivery into cells by gold nanoparticles or superior near-infrared optical properties of upconversion nanoparticles are reviewed. Their applications in sensing and imaging small organic metabolites, toxins, metal ions, pH, DNA, RNA, proteins, and pathogens are summarized. The advantages and future directions of these functional DNA materials are discussed.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 24468446      PMCID: PMC4110194          DOI: 10.1016/j.copbio.2013.12.011

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  56 in total

Review 1.  Gold nanoparticle-enabled biological and chemical detection and analysis.

Authors:  Hilde Jans; Qun Huo
Journal:  Chem Soc Rev       Date:  2011-12-19       Impact factor: 54.564

2.  Aptamer-mediated nanoparticle-based protein labeling platform for intracellular imaging and tracking endocytosis dynamics.

Authors:  Li Qiang Chen; Sai Jin Xiao; Ping Ping Hu; Li Peng; Jun Ma; Ling Fei Luo; Yuan Fang Li; Cheng Zhi Huang
Journal:  Anal Chem       Date:  2012-03-12       Impact factor: 6.986

3.  A highly sensitive fluorescence resonance energy transfer aptasensor for staphylococcal enterotoxin B detection based on exonuclease-catalyzed target recycling strategy.

Authors:  Shijia Wu; Nuo Duan; Xiaoyuan Ma; Yu Xia; Hongxin Wang; Zhouping Wang
Journal:  Anal Chim Acta       Date:  2013-04-17       Impact factor: 6.558

4.  MRI biosensor for lead detection based on the DNAzyme-induced catalytic reaction.

Authors:  Liguang Xu; Honghong Yin; Wei Ma; Libing Wang; Hua Kuang; Chuanlai Xu
Journal:  J Phys Chem B       Date:  2013-11-07       Impact factor: 2.991

5.  Synthesis of ligand-free colloidally stable water dispersible brightly luminescent lanthanide-doped upconverting nanoparticles.

Authors:  Nicoleta Bogdan; Fiorenzo Vetrone; Geoffrey A Ozin; John A Capobianco
Journal:  Nano Lett       Date:  2011-01-18       Impact factor: 11.189

Review 6.  Nanomaterials based electrochemical sensors for biomedical applications.

Authors:  Aicheng Chen; Sanghamitra Chatterjee
Journal:  Chem Soc Rev       Date:  2013-06-21       Impact factor: 54.564

7.  Stimuli-responsive plasmonic core-satellite assemblies: i-motif DNA linker enabled intracellular pH sensing.

Authors:  Chenxu Wang; Yan Du; Qiong Wu; Shuguang Xuan; Jiajing Zhou; Jibin Song; Fangwei Shao; Hongwei Duan
Journal:  Chem Commun (Camb)       Date:  2013-06-28       Impact factor: 6.222

8.  A highly selective sandwich-type FRET assay for ATP detection based on silica coated photon upconverting nanoparticles and split aptamer.

Authors:  Xiaoxiao He; Zhangxiu Li; Xuekun Jia; Kemin Wang; Jinjin Yin
Journal:  Talanta       Date:  2013-02-27       Impact factor: 6.057

9.  A smart T(1)-weighted MRI contrast agent for uranyl cations based on a DNAzyme-gadolinium conjugate.

Authors:  Weichen Xu; Hang Xing; Yi Lu
Journal:  Analyst       Date:  2013-11-07       Impact factor: 4.616

10.  A DNA enzyme that cleaves RNA.

Authors:  R R Breaker; G F Joyce
Journal:  Chem Biol       Date:  1994-12
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  17 in total

Review 1.  Imaging Adenosine Triphosphate (ATP).

Authors:  Megha Rajendran; Eric Dane; Jason Conley; Mathew Tantama
Journal:  Biol Bull       Date:  2016-08       Impact factor: 1.818

Review 2.  Metal-Dependent DNAzymes for the Quantitative Detection of Metal Ions in Living Cells: Recent Progress, Current Challenges, and Latest Results on FRET Ratiometric Sensors.

Authors:  Kevin Hwang; Quanbing Mou; Ryan J Lake; Mengyi Xiong; Brandalynn Holland; Yi Lu
Journal:  Inorg Chem       Date:  2019-07-31       Impact factor: 5.165

3.  Fluorescent nanoprobes for sensing and imaging of metal ions: recent advances and future perspectives.

Authors:  JingJing Zhang; FangFang Cheng; JingJing Li; Jun-Jie Zhu; Yi Lu
Journal:  Nano Today       Date:  2016-06-11       Impact factor: 20.722

4.  Optical Control of Metal Ion Probes in Cells and Zebrafish Using Highly Selective DNAzymes Conjugated to Upconversion Nanoparticles.

Authors:  Zhenglin Yang; Kang Yong Loh; Yueh-Te Chu; Ruopei Feng; Nitya Sai Reddy Satyavolu; Mengyi Xiong; Stephanie M Nakamata Huynh; Kevin Hwang; Lele Li; Hang Xing; Xiaobing Zhang; Yann R Chemla; Martin Gruebele; Yi Lu
Journal:  J Am Chem Soc       Date:  2018-12-04       Impact factor: 15.419

5.  DNA nanotechnology for nucleic acid analysis: multifunctional molecular DNA machine for RNA detection.

Authors:  A J Cox; H N Bengtson; K H Rohde; D M Kolpashchikov
Journal:  Chem Commun (Camb)       Date:  2016-12-06       Impact factor: 6.222

Review 6.  Discovery of and Insights into DNA "Codes" for Tunable Morphologies of Metal Nanoparticles.

Authors:  Nitya Sai Reddy Satyavolu; Kang Yong Loh; Li Huey Tan; Yi Lu
Journal:  Small       Date:  2019-05-10       Impact factor: 13.281

7.  In vitro selection of a sodium-specific DNAzyme and its application in intracellular sensing.

Authors:  Seyed-Fakhreddin Torabi; Peiwen Wu; Claire E McGhee; Lu Chen; Kevin Hwang; Nan Zheng; Jianjun Cheng; Yi Lu
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-27       Impact factor: 11.205

8.  Biochemical and Biophysical Understanding of Metal Ion Selectivity of DNAzymes.

Authors:  Kevin Hwang; Parisa Hosseinzadeh; Yi Lu
Journal:  Inorganica Chim Acta       Date:  2016-04-23       Impact factor: 2.545

9.  Identification of the Same Na(+)-Specific DNAzyme Motif from Two In Vitro Selections Under Different Conditions.

Authors:  Seyed-Fakhreddin Torabi; Yi Lu
Journal:  J Mol Evol       Date:  2015-11-17       Impact factor: 2.395

Review 10.  Transforming the blood glucose meter into a general healthcare meter for in vitro diagnostics in mobile health.

Authors:  Tian Lan; Jingjing Zhang; Yi Lu
Journal:  Biotechnol Adv       Date:  2016-03-03       Impact factor: 14.227

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