Literature DB >> 24465080

NON-HOMOGENEOUS POISSON PROCESS MODEL FOR GENETIC CROSSOVER INTERFERENCE.

Szu-Yun Leu1, Pranab K Sen2.   

Abstract

The genetic crossover interference is usually modeled with a stationary renewal process to construct the genetic map. We propose two non-homogeneous, also dependent, Poisson process models applied to the known physical map. The crossover process is assumed to start from an origin and to occur sequentially along the chromosome. The increment rate depends on the position of the markers and the number of crossover events occurring between the origin and the markers. We show how to obtain parameter estimates for the process and use simulation studies and real Drosophila data to examine the performance of the proposed models.

Entities:  

Keywords:  Crossover; Interference; Non-homogeneous; Poisson

Year:  2014        PMID: 24465080      PMCID: PMC3897483          DOI: 10.1080/03610926.2012.655876

Source DB:  PubMed          Journal:  Commun Stat Theory Methods        ISSN: 0361-0926            Impact factor:   0.893


  9 in total

1.  Characterization of human crossover interference.

Authors:  K W Broman; J L Weber
Journal:  Am J Hum Genet       Date:  2000-05-08       Impact factor: 11.025

2.  The Theory of Multiple-Strand Crossing over.

Authors:  A Weinstein
Journal:  Genetics       Date:  1936-05       Impact factor: 4.562

3.  The theory of genetical recombination; long-chromosome arms.

Authors:  A R G OWEN
Journal:  Proc R Soc Lond B Biol Sci       Date:  1949-05-09

4.  On genetic map functions.

Authors:  H Zhao; T P Speed
Journal:  Genetics       Date:  1996-04       Impact factor: 4.562

5.  Statistical analysis of chromatid interference.

Authors:  H Zhao; M S McPeek; T P Speed
Journal:  Genetics       Date:  1995-02       Impact factor: 4.562

6.  Modeling interference in genetic recombination.

Authors:  M S McPeek; T P Speed
Journal:  Genetics       Date:  1995-02       Impact factor: 4.562

7.  Statistical analysis of crossover interference using the chi-square model.

Authors:  H Zhao; T P Speed; M S McPeek
Journal:  Genetics       Date:  1995-02       Impact factor: 4.562

Review 8.  Theoretical recombination processes incorporating interference effects.

Authors:  S Karlin; U Liberman
Journal:  Theor Popul Biol       Date:  1994-10       Impact factor: 1.570

9.  Statistical analysis of multilocus recombination.

Authors:  N Risch; K Lange
Journal:  Biometrics       Date:  1983-12       Impact factor: 2.571

  9 in total

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