Literature DB >> 24462691

Steady-state kinetic mechanism of LodA, a novel cysteine tryptophylquinone-dependent oxidase.

Esha Sehanobish1, Sooim Shin1, Antonio Sanchez-Amat2, Victor L Davidson3.   

Abstract

LodA is a novel lysine-ε-oxidase which possesses a cysteine tryptophylquinone cofactor. It is the first tryptophylquinone enzyme known to function as an oxidase. A steady-state kinetic analysis shows that LodA obeys a ping-pong kinetic mechanism with values of kcat of 0.22±0.04 s(-1), Klysine of 3.2±0.5 μM and KO2 of 37.2±6.1 μM. The kcat exhibited a pH optimum at 7.5 while kcat/Klysine peaked at 7.0 and remained constant to pH 8.5. Alternative electron acceptors could not effectively substitute for O2 in the reaction. A mechanism for the reductive half reaction of LodA is proposed that is consistent with the ping-pong kinetics.
Copyright © 2014 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Amine oxidase; Cofactor; Lysine oxidase; Quinoprotein; Redox enzyme

Mesh:

Substances:

Year:  2014        PMID: 24462691      PMCID: PMC3972763          DOI: 10.1016/j.febslet.2014.01.021

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  28 in total

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Authors:  Herbert M Kagan; Wande Li
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Review 3.  Generation of protein-derived redox cofactors by posttranslational modification.

Authors:  Victor L Davidson
Journal:  Mol Biosyst       Date:  2010-10-08

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Authors:  V L Davidson
Journal:  Adv Protein Chem       Date:  2001

5.  Structure of a quinohemoprotein amine dehydrogenase with an uncommon redox cofactor and highly unusual crosslinking.

Authors:  S Datta; Y Mori; K Takagi; K Kawaguchi; Z W Chen; T Okajima; S Kuroda; T Ikeda; K Kano; K Tanizawa; F S Mathews
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-20       Impact factor: 11.205

6.  LodB is required for the recombinant synthesis of the quinoprotein L-lysine-ε-oxidase from Marinomonas mediterranea.

Authors:  María Dolores Chacón-Verdú; Daniel Gómez; Francisco Solano; Patricia Lucas-Elío; Antonio Sánchez-Amat
Journal:  Appl Microbiol Biotechnol       Date:  2013-08-18       Impact factor: 4.813

7.  Regulation of the Marinomonas mediterranea antimicrobial protein lysine oxidase by L-lysine and the sensor histidine kinase PpoS.

Authors:  Luisa R Molina-Quintero; Patricia Lucas-Elío; Antonio Sanchez-Amat
Journal:  Appl Environ Microbiol       Date:  2010-07-23       Impact factor: 4.792

8.  Chemical and kinetic reaction mechanisms of quinohemoprotein amine dehydrogenase from Paracoccus denitrificans.

Authors:  Dapeng Sun; Kazutoshi Ono; Toshihide Okajima; Katsuyuki Tanizawa; Mayumi Uchida; Yukio Yamamoto; F Scott Mathews; Victor L Davidson
Journal:  Biochemistry       Date:  2003-09-23       Impact factor: 3.162

Review 9.  Tyrosine-derived quinone cofactors.

Authors:  Minae Mure
Journal:  Acc Chem Res       Date:  2004-02       Impact factor: 22.384

10.  The structure of Paracoccus denitrificans cytochrome c550.

Authors:  R Timkovich; R E Dickerson
Journal:  J Biol Chem       Date:  1976-07-10       Impact factor: 5.157

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  8 in total

1.  Roles of Copper and a Conserved Aspartic Acid in the Autocatalytic Hydroxylation of a Specific Tryptophan Residue during Cysteine Tryptophylquinone Biogenesis.

Authors:  Heather R Williamson; Esha Sehanobish; Alan M Shiller; Antonio Sanchez-Amat; Victor L Davidson
Journal:  Biochemistry       Date:  2017-02-10       Impact factor: 3.162

2.  Roles of Conserved Residues of the Glycine Oxidase GoxA in Controlling Activity, Cooperativity, Subunit Composition, and Cysteine Tryptophylquinone Biosynthesis.

Authors:  Esha Sehanobish; Heather R Williamson; Victor L Davidson
Journal:  J Biol Chem       Date:  2016-09-16       Impact factor: 5.157

3.  Roles of active site residues in LodA, a cysteine tryptophylquinone dependent ε-lysine oxidase.

Authors:  Esha Sehanobish; María Dolores Chacón-Verdú; Antonio Sanchez-Amat; Victor L Davidson
Journal:  Arch Biochem Biophys       Date:  2015-06-03       Impact factor: 4.013

Review 4.  Protein-Derived Cofactors Revisited: Empowering Amino Acid Residues with New Functions.

Authors:  Victor L Davidson
Journal:  Biochemistry       Date:  2018-03-06       Impact factor: 3.162

Review 5.  Diversity of structures, catalytic mechanisms and processes of cofactor biosynthesis of tryptophylquinone-bearing enzymes.

Authors:  Erik T Yukl; Victor L Davidson
Journal:  Arch Biochem Biophys       Date:  2018-07-17       Impact factor: 4.013

6.  Characterization of PlGoxB, a flavoprotein required for cysteine tryptophylquinone biosynthesis in glycine oxidase from Pseudoalteromonas luteoviolacea.

Authors:  Kyle J Mamounis; Zhongxin Ma; Antonio Sanchez-Amat; Victor L Davidson
Journal:  Arch Biochem Biophys       Date:  2019-09-18       Impact factor: 4.013

7.  Structural Determinants of the Specific Activities of an L-Amino Acid Oxidase from Pseudoalteromonas luteoviolacea CPMOR-1 with Broad Substrate Specificity.

Authors:  Kyle J Mamounis; Maria Luiza Caldas Nogueira; Daniela Priscila Marchi Salvador; Andres Andreo-Vidal; Antonio Sanchez-Amat; Victor L Davidson
Journal:  Molecules       Date:  2022-07-24       Impact factor: 4.927

8.  Kinetic characteristics of L-lysine α- oxidase from Trichoderma cf. aureoviride Rifai VKM F-4268D: Substrate specificity and allosteric effects.

Authors:  Vladimir I Krupyanko; Alexander G Medentsev; Elena V Lukasheva; Anna Yu Arinbasarova
Journal:  Biochem Biophys Rep       Date:  2016-11-10
  8 in total

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