| Literature DB >> 24454720 |
Xu Chen1, Zhe Wang2, Yulan Yan1, Ping Li1, Zheng Yang1, Lingyan Qin1, Wuning Mo1.
Abstract
BACKGROUND: The X-ray repair cross-complementing group 3 (XRCC3) in homologous recombination repair (HRR) pathway plays a very important role in DNA double-strand break repair (DSBR). Variations in the XRCC3 gene might lead to altered protein structure or function which may change DSBR efficiency and result in cancer. The XRCC3 C18067T polymorphism has been reported to be associated with skin cancer susceptibility, yet the results of these previous results have been inconsistent or controversial. To derive a more precise estimation of the association, we conducted a meta-analysis.Entities:
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Year: 2014 PMID: 24454720 PMCID: PMC3893120 DOI: 10.1371/journal.pone.0084195
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Scale for Quality Assessment.
| Criterion | Score |
| Representativeness of cases | |
| Selected from population or cancer registry | 3 |
| Selected from hospital | 2 |
| Selected from pathology archives, but without description | 1 |
| Not described | 0 |
| Credibility of controls | |
| Population-based | 3 |
| Blood donors or volunteers | 2 |
| Hospital-based (cancer-free patients) | 1 |
| Not described | 0 |
| Ascertainment of skin cancer | |
| Histologic or pathologic confirmation | 3 |
| Diagnosis of bladder cancer by patient medical record | 1.5 |
| Not described | 0 |
| Genotyping examination | |
| Genotyping done under “blinded” condition | 3 |
| Unblinded or not mentioned | 0 |
| Hardy-Weinberg equilibrium | |
| Hardy–Weinberg equilibrium in controls | 3 |
| Hardy–Weinberg disequilibrium in controls | 0 |
| Total sample size | |
| >1,000 | 3 |
| >500 and ≤1,000 | 2 |
| >200 and≤500 | 1 |
| ≤200 | 0 |
Figure 1Flow diagram of included studies for this meta-analysis.
Characteristics of eligible studies.
| First author (year) | Ethnicity (country) | Genotyping methods | Source of control | Sample size (case/control) | Skin cancer confirmation | Matching criteria | Tumor type | HWE( | Quality score |
| Winsey (2000) | Caucasian (UK) | PCR-SSP | HB | 125/211 | HC | NR | melanoma | 0.113 | 12 |
| Duan (2002) | Caucasian (America) | PCR-RFLP | HB | 305/319 | HC | Age, sex ethnicity | melanoma | 0.451 | 12 |
| Jacobsen (2003) | Caucasian (Denmar) | PCR-RFLP | PB | 318/318 | NR | Age, sex | BCC | 0.095 | 10 |
| Bertram (2004a) | Caucasian (UK) | PCR-SSP | HB | 140/362 | NR | NR | melanoma | 0.973 | 12.5 |
| Bertram (2004b) | Caucasian (UK) | PCR-SSP | HB | 140/203 | NR | NR | melanoma | 0.696 | 11.5 |
| Han (2004a) | Caucasian (America) | TaqMan | PB | 220/665 | PC | Age | SCC | 0.741 | 17 |
| Han (2004b) | Caucasian (America) | TaqMan | PB | 187/810 | PC | Age and ethnicity | melanoma | 0.359 | 17 |
| Han (2004c) | Caucasian (America) | TaqMan | PB | 276/810 | PC | Age and ethnicity | SCC | 0.359 | 18 |
| Han (2004d) | Caucasian (America) | TaqMan | PB | 279/810 | PC | Age and ethnicity | BCC | 0.359 | 18 |
| Festa (2005) | Caucasian (Sweden) | PCR-RFLP | PB | 197/548 | NR | NR | BCC | 0.541 | 10.5 |
| Thirumaran (2006a) | Caucasian (Multiple) | TaqMan | HB | 293/259 | HC | Age, sex ethnicity | BCC | 0.565 | 15 |
| Thirumaran (2006b) | Caucasian (Multiple) | TaqMan | HB | 237/274 | HC | Age, sex ethnicity | BCC | 0.565 | 15 |
| Figl (2010) | Caucasian (German) | TaqMan | HB | 1184/1274 | HC | Ethnicity | melanoma | 0.07 | 12 |
| Gonçalves (2011) | Mixed (Brail) | PCR-RFLP | HB | 192/192 | HC | Age, sex | melanoma | 0.788 | 11.5 |
| Makowska (2012) | Caucasian (Poland) | PCR-RFLP | HB | 236/236 | HC | NR | SCC | 0.968 | 10 |
HC, Histologically confirmed; PC, Pathologically confirmed; NR Not reported; PB, Population–based; HB, Hospital–based; HWE, Hardy–Weinberg equilibrium in control population; PCR–RFLP, Polymerase chain reaction-restriction fragment length polymorphism; PCR-SSP, Polymerase chain reaction-sequence-specific primer; BCC, basal cell carcinoma; SCC, squamous cell carcinoma.
Figure 2Forest plots of XRCC3 C18067T polymorphisms and skin cancer risk which is stratified by cutaneous melanoma and nonmelanoma skin cancer (homozygote comparison TT versus . CC).
Figure 3Forest plots of XRCC3 C18067T polymorphisms and skin cancer risk which is stratified by cutaneous melanoma and nonmelanoma skin cancer (recessive model TT versus . TC+CC).
Figure 4Forest plots of XRCC3 C18067T polymorphisms and skin cancer risk which is stratified by cutaneous melanoma, basal cell carcinoma and squamous cell carcinoma (homozygote comparison TT versus . TC/CC).
Figure 5Forest plots of XRCC3 C18067T polymorphisms and skin cancer risk which is stratified by cutaneous melanoma, basal cell carcinoma and squamous cell carcinoma (recessive model TT versus . TC/CC).
Meta-analysis of the XRCC3 C18067T polymorphism with risk of skin cancer.
| Comparison | Tumor type | N | OR | 95%CI | Pa | Mode | χ2 | Pb | I2 |
| TT versus. CC | Overall | 15 | 0.90 | 0.75–1.07 | 0.242 | Random | 26.58 | 0.022 | 47.3 |
| melanoma | 7 | 1.12 | 0.87–1.43 | 0.38 | Fixed | 10.12 | 0.120 | 40.7 | |
| NMSC | 8 |
|
|
| Fixed | 8.54 | 0.288 | 18 | |
| BCC | 5 |
|
|
| Fixed | 5.66 | 0.226 | 29.3 | |
| SCC | 3 | 0.81 | 0.61–1.08 | 0.158 | Fixed | 2.13 | 0.346 | 5.9 | |
| TC versus. CC | Overall | 15 | 0.95 | 0.82–1.10 | 0.475 | Random | 37.72 | 0.001 | 62.9 |
| melanoma | 7 | 1.07 | 0.84–1.37 | 0.593 | Random | 20.11 | 0.003 | 70.2 | |
| NMSC | 8 | 0.87 | 0.72–1.04 | 0.131 | Random | 16.33 | 0.022 | 57.1 | |
| BCC | 5 | 0.89 | 0.67–1.19 | 0.433 | Random | 13.98 | 0.007 | 71.4 | |
| SCC | 3 |
|
|
| Fixed | 1.83 | 0.401 | 0 | |
| TT versus. TC/CC | Overall | 15 | 0.95 | 0.85–1.06 | 0.322 | Fixed | 16.32 | 0.294 | 14.2 |
| melanoma | 7 | 1.09 | 0.94–1.28 | 0.256 | Fixed | 3.50 | 0.744 | 0 | |
| NMSC | 8 |
|
|
| Fixed | 5.91 | 0.550 | 0 | |
| BCC | 5 |
|
|
| Fixed | 3.33 | 0.504 | 0 | |
| SCC | 3 | 0.90 | 0.70–1.15 | 0.387 | Fixed | 1.34 | 0.511 | 0 | |
| TT/TC versus. CC | Overall | 15 | 0.94 | 0.81–1.09 | 0.424 | Random | 42.32 | 0 | 67.1 |
| melanoma | 7 | 1.09 | 0.86–1.40 | 0.469 | Random | 23.25 | 0.001 | 74.2 | |
| NMSC | 8 | 0.84 | 0.70–1.00 | 0.053 | Random | 16.86 | 0.018 | 58.5 | |
| BCC | 5 | 0.85 | 0.65–1.12 | 0.241 | Random | 13.06 | 0.011 | 69.4 | |
| SCC | 3 |
|
|
| Fixed | 2.57 | 0.276 | 22.2 |
NMSC, nonmelanoma skin cancer; BCC, basal cell carcinoma; SCC, squamous cell carcinoma; N, number of studies; Fixed, fixed effect model; Random, random effect model; Pa, test for association; Pb, test for heterogeneity.
Figure 6Galbraith plots of XRCC3 C18067T polymorphism and skin cancer risk in dominant model TT/TC versus . CC.
The studies of Winsey et al. and Jacobsen et al. were spotted as outliers.
Figure 7Sensitive analysis of XRCC3 C18067T polymorphism and skin cancer risk (recessive model TT versus . TC/CC).
Figure 8Begg's funnel plots for publication bias in the studies of the meta-analysis on the association between XRCC3 C18067T and skin cancer risk of the overall populations (dominant model TT/TC versus .CC).