Literature DB >> 24454229

5-(5'-Fluoro-2'-meth-oxy-biphenyl-3-yl)-1,3,4-oxa-diazol-2-amine.

M K Usha1, G C Ramaprasad2, Balakrishna Kalluraya2, Rajni Kant3, Vivek K Gupta3, D Revannasiddaiah1.   

Abstract

In the title compound, C15H12FN3O2, the dihedral angles between the central benzene ring and the pendant benzene and oxa-diazole rings are 45.05 (13) and 15.60 (14)°, respectively. The C atom of the meth-oxy group is roughly coplanar with its attached ring [displacement = 0.178 (4) Å]. In the crystal, N-H⋯N hydrogen bonds link the mol-ecules into [010] chains. Weak C-H⋯π inter-actions are also observed.

Entities:  

Year:  2013        PMID: 24454229      PMCID: PMC3885053          DOI: 10.1107/S1600536813031206

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the title compound, see: Ainsworth (1965 ▶); Paik et al. (2002 ▶); Kulkarni et al. (2004 ▶). For a related structure, see: Zheng et al. (2012 ▶).

Experimental

Crystal data

C15H12FN3O2 M = 285.28 Monoclinic, a = 12.9105 (9) Å b = 6.1738 (4) Å c = 16.9255 (11) Å β = 90.341 (7)° V = 1349.05 (16) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 293 K 0.30 × 0.20 × 0.20 mm

Data collection

Oxford Diffraction Xcalibur Sapphire3 CCD diffractometer Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2010 ▶) T min = 0.806, T max = 1.000 5027 measured reflections 2650 independent reflections 1382 reflections with I > 2σ(I) R int = 0.048

Refinement

R[F 2 > 2σ(F 2)] = 0.054 wR(F 2) = 0.135 S = 1.01 2650 reflections 191 parameters H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.18 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536813031206/hb7155sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813031206/hb7155Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813031206/hb7155Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H12FN3O2F(000) = 592
Mr = 285.28Dx = 1.405 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1316 reflections
a = 12.9105 (9) Åθ = 4.1–28.0°
b = 6.1738 (4) ŵ = 0.11 mm1
c = 16.9255 (11) ÅT = 293 K
β = 90.341 (7)°Block, colourless
V = 1349.05 (16) Å30.30 × 0.20 × 0.20 mm
Z = 4
Oxford Diffraction Xcalibur Sapphire3 CCD diffractometer2650 independent reflections
Radiation source: fine-focus sealed tube1382 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.048
Detector resolution: 16.1049 pixels mm-1θmax = 26.0°, θmin = 3.5°
ω scansh = −8→15
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2010)k = −7→4
Tmin = 0.806, Tmax = 1.000l = −17→20
5027 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.054Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.135H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0316P)2] where P = (Fo2 + 2Fc2)/3
2650 reflections(Δ/σ)max = 0.001
191 parametersΔρmax = 0.18 e Å3
0 restraintsΔρmin = −0.18 e Å3
Experimental. CrysAlis PRO, Agilent Technologies, Version 1.171.36.28 (release 01–02-2013 CrysAlis171. NET) (compiled Feb 1 2013,16:14:44) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.89022 (14)0.0443 (3)0.56943 (11)0.0411 (5)
C20.9336 (2)0.0508 (4)0.64301 (15)0.0357 (7)
N30.95451 (18)−0.1405 (3)0.67077 (13)0.0435 (6)
N40.92173 (18)−0.2865 (3)0.61121 (14)0.0440 (6)
C50.8848 (2)−0.1745 (4)0.55387 (16)0.0361 (7)
N60.94739 (18)0.2434 (3)0.67575 (14)0.0522 (7)
H6A0.97380.25340.72240.063*
H6B0.92990.35860.65040.063*
C70.8429 (2)−0.2443 (4)0.47839 (16)0.0394 (7)
C80.8602 (2)−0.4578 (4)0.45329 (17)0.0454 (8)
H80.8959−0.55490.48540.054*
C90.8235 (2)−0.5213 (4)0.38043 (18)0.0480 (8)
H90.8363−0.66150.36280.058*
C100.7682 (2)−0.3804 (4)0.33300 (17)0.0466 (8)
H100.7439−0.42680.28400.056*
C110.7485 (2)−0.1694 (4)0.35787 (16)0.0388 (7)
C120.7856 (2)−0.1043 (4)0.43139 (16)0.0405 (7)
H120.77180.03520.44930.049*
C130.6929 (2)−0.0182 (4)0.30377 (17)0.0411 (7)
C140.7207 (2)−0.0126 (5)0.22425 (18)0.0506 (8)
H140.7731−0.10270.20590.061*
C150.6709 (2)0.1257 (5)0.17307 (18)0.0524 (9)
F150.70017 (16)0.1262 (3)0.09598 (11)0.0846 (7)
C160.5951 (3)0.2629 (5)0.19672 (19)0.0531 (9)
H160.56370.35740.16110.064*
C170.5654 (2)0.2585 (5)0.27592 (17)0.0517 (9)
H170.51220.34800.29320.062*
C180.6147 (2)0.1221 (4)0.32879 (17)0.0441 (8)
O190.58667 (17)0.1049 (3)0.40644 (12)0.0614 (7)
C200.5209 (3)0.2668 (6)0.4382 (2)0.0936 (14)
H20A0.55060.40710.42900.140*
H20B0.51340.24410.49400.140*
H20C0.45410.25880.41300.140*
U11U22U33U12U13U23
O10.0593 (13)0.0289 (9)0.0351 (11)0.0003 (9)−0.0166 (10)0.0016 (9)
C20.0461 (17)0.0308 (14)0.0301 (16)0.0027 (12)−0.0122 (14)0.0017 (13)
N30.0615 (17)0.0327 (12)0.0360 (15)0.0038 (11)−0.0156 (13)0.0011 (12)
N40.0553 (16)0.0352 (13)0.0412 (15)0.0026 (11)−0.0122 (14)0.0020 (11)
C50.0457 (17)0.0279 (14)0.0345 (17)−0.0006 (12)−0.0035 (14)−0.0008 (13)
N60.0814 (19)0.0304 (12)0.0444 (16)0.0014 (12)−0.0292 (15)−0.0041 (12)
C70.0481 (17)0.0339 (15)0.0362 (18)−0.0033 (13)−0.0061 (15)0.0014 (14)
C80.0564 (19)0.0326 (14)0.0471 (19)−0.0002 (14)−0.0083 (16)0.0077 (14)
C90.061 (2)0.0363 (15)0.047 (2)−0.0004 (14)−0.0050 (17)−0.0040 (15)
C100.060 (2)0.0403 (17)0.0391 (18)−0.0048 (14)−0.0127 (16)−0.0072 (14)
C110.0448 (18)0.0384 (15)0.0331 (17)−0.0026 (13)−0.0104 (15)−0.0035 (13)
C120.0461 (17)0.0359 (15)0.0393 (18)−0.0002 (13)−0.0103 (15)−0.0027 (14)
C130.0440 (18)0.0432 (17)0.0359 (18)−0.0017 (13)−0.0122 (15)−0.0060 (14)
C140.0465 (19)0.058 (2)0.047 (2)0.0030 (15)−0.0033 (16)0.0008 (17)
C150.053 (2)0.066 (2)0.0376 (19)−0.0013 (17)−0.0043 (17)0.0113 (17)
F150.0898 (16)0.1211 (17)0.0430 (12)0.0135 (13)0.0050 (12)0.0220 (12)
C160.063 (2)0.052 (2)0.044 (2)−0.0017 (17)−0.0132 (18)0.0107 (17)
C170.056 (2)0.0550 (19)0.044 (2)0.0098 (16)−0.0097 (17)0.0001 (17)
C180.0494 (19)0.0460 (17)0.0367 (18)−0.0024 (14)−0.0126 (16)0.0019 (15)
O190.0755 (17)0.0654 (15)0.0433 (14)0.0219 (12)−0.0017 (13)−0.0034 (12)
C200.131 (4)0.092 (3)0.059 (3)0.044 (3)0.005 (3)−0.012 (2)
O1—C21.363 (3)C11—C131.490 (4)
O1—C51.378 (3)C12—H120.9300
C2—N31.299 (3)C13—C141.396 (4)
C2—N61.323 (3)C13—C181.398 (4)
N3—N41.415 (3)C14—C151.374 (4)
N4—C51.281 (3)C14—H140.9300
C5—C71.450 (3)C15—C161.356 (4)
N6—H6A0.8600C15—F151.361 (3)
N6—H6B0.8600C16—C171.397 (4)
C7—C121.386 (3)C16—H160.9300
C7—C81.403 (3)C17—C181.381 (4)
C8—C91.375 (4)C17—H170.9300
C8—H80.9300C18—O191.369 (3)
C9—C101.380 (4)O19—C201.420 (3)
C9—H90.9300C20—H20A0.9600
C10—C111.393 (3)C20—H20B0.9600
C10—H100.9300C20—H20C0.9600
C11—C121.390 (3)
C2—O1—C5102.9 (2)C7—C12—H12119.6
N3—C2—N6129.7 (3)C11—C12—H12119.6
N3—C2—O1112.8 (2)C14—C13—C18117.9 (3)
N6—C2—O1117.5 (2)C14—C13—C11118.8 (3)
C2—N3—N4105.1 (2)C18—C13—C11123.3 (3)
C5—N4—N3107.7 (2)C15—C14—C13120.1 (3)
N4—C5—O1111.5 (2)C15—C14—H14120.0
N4—C5—C7130.0 (2)C13—C14—H14120.0
O1—C5—C7118.6 (2)C16—C15—F15119.1 (3)
C2—N6—H6A120.0C16—C15—C14122.6 (3)
C2—N6—H6B120.0F15—C15—C14118.3 (3)
H6A—N6—H6B120.0C15—C16—C17118.3 (3)
C12—C7—C8119.9 (3)C15—C16—H16120.9
C12—C7—C5121.0 (2)C17—C16—H16120.9
C8—C7—C5119.1 (2)C18—C17—C16120.4 (3)
C9—C8—C7119.0 (3)C18—C17—H17119.8
C9—C8—H8120.5C16—C17—H17119.8
C7—C8—H8120.5O19—C18—C17123.1 (3)
C8—C9—C10121.1 (3)O19—C18—C13116.0 (3)
C8—C9—H9119.5C17—C18—C13120.8 (3)
C10—C9—H9119.5C18—O19—C20118.1 (3)
C9—C10—C11120.6 (3)O19—C20—H20A109.5
C9—C10—H10119.7O19—C20—H20B109.5
C11—C10—H10119.7H20A—C20—H20B109.5
C12—C11—C10118.6 (3)O19—C20—H20C109.5
C12—C11—C13122.1 (2)H20A—C20—H20C109.5
C10—C11—C13119.3 (2)H20B—C20—H20C109.5
C7—C12—C11120.9 (2)
C5—O1—C2—N30.6 (3)C10—C11—C12—C71.3 (4)
C5—O1—C2—N6−178.7 (2)C13—C11—C12—C7−175.8 (3)
N6—C2—N3—N4178.8 (3)C12—C11—C13—C14133.5 (3)
O1—C2—N3—N4−0.4 (3)C10—C11—C13—C14−43.7 (4)
C2—N3—N4—C50.0 (3)C12—C11—C13—C18−45.5 (4)
N3—N4—C5—O10.4 (3)C10—C11—C13—C18137.3 (3)
N3—N4—C5—C7178.7 (3)C18—C13—C14—C15−0.8 (4)
C2—O1—C5—N4−0.6 (3)C11—C13—C14—C15−179.8 (2)
C2—O1—C5—C7−179.2 (2)C13—C14—C15—C161.0 (5)
N4—C5—C7—C12165.3 (3)C13—C14—C15—F15−179.9 (3)
O1—C5—C7—C12−16.4 (4)F15—C15—C16—C17179.4 (3)
N4—C5—C7—C8−14.2 (5)C14—C15—C16—C17−1.6 (5)
O1—C5—C7—C8164.1 (2)C15—C16—C17—C181.9 (5)
C12—C7—C8—C92.8 (4)C16—C17—C18—O19−177.6 (3)
C5—C7—C8—C9−177.7 (3)C16—C17—C18—C13−1.8 (5)
C7—C8—C9—C10−1.6 (4)C14—C13—C18—O19177.3 (3)
C8—C9—C10—C110.3 (4)C11—C13—C18—O19−3.7 (4)
C9—C10—C11—C12−0.1 (4)C14—C13—C18—C171.2 (4)
C9—C10—C11—C13177.2 (3)C11—C13—C18—C17−179.8 (3)
C8—C7—C12—C11−2.7 (4)C17—C18—O19—C20−14.6 (4)
C5—C7—C12—C11177.8 (3)C13—C18—O19—C20169.5 (3)
D—H···AD—HH···AD···AD—H···A
N6—H6A···N3i0.862.132.972 (3)166
N6—H6B···N4ii0.862.293.118 (3)161
C17—H17···Cg3iii0.932.723.53146
Table 1

Hydrogen-bond geometry (Å, °)

Cg3 is the centroid of the C13–C18 ring.

D—H⋯A D—HH⋯A DA D—H⋯A
N6—H6A⋯N3i 0.862.132.972 (3)166
N6—H6B⋯N4ii 0.862.293.118 (3)161
C17—H17⋯Cg3iii 0.932.723.53146

Symmetry codes: (i) ; (ii) ; (iii) .

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