| Literature DB >> 24454178 |
Yu-Hong Ma1, Hong-Wei Yang1, Jing-Tuan Hao1, Pi-Zhuang Ma2, Ting Yao1.
Abstract
In the title compound, [Na4Zn(C6H5O7)2] n , the Zn(II) ion lies on an inversion center and is coordinated by six O atoms from two citrate ligands, forming a distorted octa-hedral geometry. There are two crystallographically independent Na(+) cations in the asymmetric unit. One Na(+) cation exhibits a distorted square-pyramidal geometry defined by five O atoms from four citrate ligands. The other Na(+) cation is surrounded by six O atoms from five citrate ligands in a distorted octa-hedral geometry. The Na(+) cations are bridged by citrate carboxyl-ate groups, forming a layer parallel to (100). The layers are further assembled into a three-dimensional network with the [Zn(citrate)2](4-) building units as 'pillars'; O-H⋯O hydrogen bonds also stabilize the structure.Entities:
Year: 2013 PMID: 24454178 PMCID: PMC3885003 DOI: 10.1107/S1600536813030067
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Na4Zn(C6H5O7)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 7740 reflections |
| θ = 3.0–27.5° | |
| µ = 1.74 mm−1 | |
| β = 113.66 (3)° | Block, colorless |
| 0.21 × 0.21 × 0.20 mm | |
| Rigaku SCXmini CCD diffractometer | 1831 independent reflections |
| Radiation source: fine-focus sealed tube | 1570 reflections with |
| Graphite monochromator | |
| ω scan | θmax = 27.5°, θmin = 3.0° |
| Absorption correction: multi-scan ( | |
| 8270 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1831 reflections | (Δ/σ)max = 0.001 |
| 145 parameters | Δρmax = 0.37 e Å−3 |
| 0 restraints | Δρmin = −0.47 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O7 | 0.4930 (2) | 0.98761 (13) | 0.7363 (2) | 0.0127 (4) | |
| O3 | 0.2766 (2) | 0.89905 (13) | 0.4482 (2) | 0.0178 (4) | |
| O4 | 0.1751 (2) | 0.77628 (13) | 0.5749 (2) | 0.0175 (4) | |
| O6 | 0.8225 (3) | 0.72885 (15) | 0.7149 (2) | 0.0233 (4) | |
| O5 | 0.6783 (2) | 0.87114 (13) | 0.5716 (2) | 0.0175 (4) | |
| C8 | 0.7041 (3) | 0.8007 (2) | 0.6829 (3) | 0.0141 (5) | |
| C4 | 0.2806 (3) | 0.84956 (19) | 0.5774 (3) | 0.0124 (5) | |
| C5 | 0.5911 (3) | 0.80021 (19) | 0.7885 (3) | 0.0132 (5) | |
| H5A | 0.6748 | 0.8118 | 0.9042 | 0.016* | |
| H5B | 0.5407 | 0.7291 | 0.7822 | 0.016* | |
| C3 | 0.4328 (3) | 0.87982 (18) | 0.7479 (3) | 0.0118 (5) | |
| C2 | 0.3615 (3) | 0.87711 (19) | 0.8861 (3) | 0.0144 (5) | |
| H2A | 0.3180 | 0.8056 | 0.8920 | 0.017* | |
| H2B | 0.4629 | 0.8916 | 0.9923 | 0.017* | |
| O2 | 0.1969 (2) | 0.98895 (14) | 0.9984 (2) | 0.0179 (4) | |
| Zn1 | 0.5000 | 1.0000 | 0.5000 | 0.01321 (12) | |
| Na2 | −0.05408 (14) | 1.12137 (8) | 0.83937 (13) | 0.0216 (3) | |
| Na1 | 0.10230 (14) | 1.11830 (8) | 0.53517 (13) | 0.0222 (3) | |
| O1 | 0.1002 (2) | 0.98321 (13) | 0.7212 (2) | 0.0186 (4) | |
| C1 | 0.2085 (3) | 0.95534 (19) | 0.8644 (3) | 0.0131 (5) | |
| H1 | 0.606 (4) | 1.000 (2) | 0.828 (4) | 0.016* |
| O7 | 0.0154 (9) | 0.0111 (9) | 0.0118 (9) | −0.0021 (7) | 0.0057 (7) | −0.0007 (7) |
| O3 | 0.0185 (9) | 0.0207 (10) | 0.0114 (9) | −0.0038 (8) | 0.0030 (8) | 0.0027 (7) |
| O4 | 0.0173 (9) | 0.0160 (9) | 0.0210 (10) | −0.0047 (7) | 0.0095 (8) | −0.0030 (7) |
| O6 | 0.0225 (10) | 0.0256 (11) | 0.0245 (11) | 0.0128 (8) | 0.0123 (9) | 0.0071 (8) |
| O5 | 0.0223 (10) | 0.0168 (9) | 0.0180 (9) | 0.0037 (7) | 0.0127 (8) | 0.0041 (7) |
| C8 | 0.0123 (12) | 0.0156 (13) | 0.0137 (12) | 0.0008 (10) | 0.0045 (10) | −0.0014 (10) |
| C4 | 0.0110 (12) | 0.0132 (12) | 0.0151 (12) | 0.0031 (9) | 0.0072 (10) | −0.0014 (9) |
| C5 | 0.0145 (12) | 0.0127 (12) | 0.0131 (12) | 0.0023 (10) | 0.0065 (10) | 0.0017 (9) |
| C3 | 0.0136 (12) | 0.0104 (11) | 0.0123 (12) | −0.0003 (9) | 0.0062 (10) | 0.0028 (9) |
| C2 | 0.0155 (12) | 0.0160 (13) | 0.0134 (13) | 0.0014 (10) | 0.0076 (11) | 0.0024 (10) |
| O2 | 0.0176 (9) | 0.0229 (10) | 0.0162 (9) | 0.0018 (8) | 0.0098 (8) | −0.0047 (7) |
| Zn1 | 0.0152 (2) | 0.0130 (2) | 0.0124 (2) | 0.00022 (17) | 0.00663 (17) | 0.00209 (16) |
| Na2 | 0.0197 (5) | 0.0236 (6) | 0.0216 (6) | 0.0023 (4) | 0.0084 (5) | −0.0013 (4) |
| Na1 | 0.0208 (6) | 0.0253 (6) | 0.0223 (6) | −0.0022 (4) | 0.0105 (5) | −0.0007 (4) |
| O1 | 0.0178 (9) | 0.0208 (10) | 0.0159 (9) | 0.0024 (7) | 0.0053 (8) | 0.0006 (7) |
| C1 | 0.0134 (12) | 0.0113 (11) | 0.0165 (13) | −0.0039 (10) | 0.0080 (11) | −0.0011 (10) |
| O7—C3 | 1.450 (3) | O2—Na2 | 2.539 (2) |
| O7—Zn1 | 2.0866 (17) | Zn1—O5iv | 2.0742 (17) |
| O3—C4 | 1.274 (3) | Zn1—O3iv | 2.0796 (17) |
| O3—Zn1 | 2.0796 (17) | Zn1—O7iv | 2.0866 (17) |
| O3—Na2i | 2.432 (2) | Na2—O4v | 2.415 (2) |
| O4—C4 | 1.239 (3) | Na2—O3i | 2.432 (2) |
| O4—Na2ii | 2.415 (2) | Na2—O6vi | 2.478 (2) |
| O4—Na1i | 2.417 (2) | Na2—O2vii | 2.548 (2) |
| O6—C8 | 1.251 (3) | Na2—O1 | 2.565 (2) |
| O6—Na1iii | 2.443 (2) | Na1—O5iv | 2.288 (2) |
| O6—Na2iii | 2.478 (2) | Na1—O1 | 2.348 (2) |
| O5—C8 | 1.266 (3) | Na1—O4i | 2.417 (2) |
| O5—Zn1 | 2.0742 (17) | Na1—O6vi | 2.443 (2) |
| O5—Na1iv | 2.288 (2) | Na1—O1i | 2.512 (2) |
| C8—C5 | 1.523 (3) | Na1—C4i | 2.833 (3) |
| C8—Na1iv | 3.061 (3) | Na1—C8iv | 3.061 (3) |
| C4—C3 | 1.540 (3) | O1—C1 | 1.248 (3) |
| C4—Na1i | 2.833 (3) | O7—H1 | 0.95 (3) |
| C5—C3 | 1.534 (3) | C2—H2A | 0.97 |
| C3—C2 | 1.523 (3) | C2—H2B | 0.97 |
| C2—C1 | 1.516 (3) | C5—H5A | 0.97 |
| O2—C1 | 1.279 (3) | C5—H5B | 0.97 |
| C3—O7—Zn1 | 106.16 (13) | Na1—Na2—Na1viii | 102.34 (4) |
| C4—O3—Zn1 | 112.86 (16) | O4v—Na2—Na2vii | 113.39 (6) |
| C4—O3—Na2i | 127.44 (16) | O3i—Na2—Na2vii | 120.36 (6) |
| Zn1—O3—Na2i | 119.59 (8) | O6vi—Na2—Na2vii | 125.52 (7) |
| C4—O4—Na2ii | 160.44 (17) | O2—Na2—Na2vii | 38.48 (4) |
| C4—O4—Na1i | 96.18 (14) | O2vii—Na2—Na2vii | 38.32 (4) |
| Na2ii—O4—Na1i | 98.47 (7) | O1—Na2—Na2vii | 76.31 (5) |
| C8—O6—Na1iii | 119.97 (16) | Na1—Na2—Na2vii | 120.15 (4) |
| C8—O6—Na2iii | 154.24 (17) | Na1viii—Na2—Na2vii | 114.57 (5) |
| Na1iii—O6—Na2iii | 85.80 (7) | O5iv—Na1—O1 | 122.68 (8) |
| C8—O5—Zn1 | 130.84 (16) | O5iv—Na1—O4i | 122.16 (7) |
| C8—O5—Na1iv | 115.86 (16) | O1—Na1—O4i | 114.15 (7) |
| Zn1—O5—Na1iv | 112.04 (8) | O5iv—Na1—O6vi | 112.02 (8) |
| O6—C8—O5 | 123.2 (2) | O1—Na1—O6vi | 82.02 (7) |
| O6—C8—C5 | 116.0 (2) | O4i—Na1—O6vi | 84.37 (8) |
| O5—C8—C5 | 120.8 (2) | O5iv—Na1—O1i | 89.47 (7) |
| O4—C4—O3 | 124.7 (2) | O1—Na1—O1i | 93.91 (7) |
| O4—C4—C3 | 117.7 (2) | O4i—Na1—O1i | 76.45 (7) |
| O3—C4—C3 | 117.6 (2) | O6vi—Na1—O1i | 156.79 (8) |
| C8—C5—C3 | 119.2 (2) | O5iv—Na1—C4i | 137.95 (8) |
| O7—C3—C2 | 108.32 (19) | O1—Na1—C4i | 92.09 (8) |
| O7—C3—C5 | 110.93 (19) | O4i—Na1—C4i | 25.78 (6) |
| C2—C3—C5 | 109.63 (19) | O6vi—Na1—C4i | 94.17 (8) |
| O7—C3—C4 | 108.45 (18) | O1i—Na1—C4i | 63.03 (7) |
| C2—C3—C4 | 110.9 (2) | O5iv—Na1—C8iv | 21.85 (6) |
| C5—C3—C4 | 108.56 (19) | O1—Na1—C8iv | 144.32 (8) |
| C1—C2—C3 | 115.0 (2) | O4i—Na1—C8iv | 100.39 (7) |
| C1—O2—Na2 | 92.67 (15) | O6vi—Na1—C8iv | 111.12 (7) |
| C1—O2—Na2vii | 122.64 (15) | O1i—Na1—C8iv | 85.42 (7) |
| Na2—O2—Na2vii | 103.20 (7) | C4i—Na1—C8iv | 118.60 (8) |
| O5iv—Zn1—O5 | 180.0 | O5iv—Na1—Na1i | 112.02 (7) |
| O5iv—Zn1—O3iv | 90.85 (7) | O1—Na1—Na1i | 49.04 (5) |
| O5—Zn1—O3iv | 89.15 (7) | O4i—Na1—Na1i | 96.43 (6) |
| O5iv—Zn1—O3 | 89.15 (7) | O6vi—Na1—Na1i | 126.69 (7) |
| O5—Zn1—O3 | 90.85 (7) | O1i—Na1—Na1i | 44.88 (5) |
| O3iv—Zn1—O3 | 180.000 (1) | C4i—Na1—Na1i | 71.49 (6) |
| O5iv—Zn1—O7iv | 86.09 (7) | C8iv—Na1—Na1i | 120.93 (7) |
| O5—Zn1—O7iv | 93.91 (7) | O5iv—Na1—Na2 | 155.15 (7) |
| O3iv—Zn1—O7iv | 79.02 (7) | O1—Na1—Na2 | 49.81 (5) |
| O3—Zn1—O7iv | 100.98 (7) | O4i—Na1—Na2 | 74.74 (5) |
| O5iv—Zn1—O7 | 93.91 (7) | O6vi—Na1—Na2 | 47.54 (5) |
| O5—Zn1—O7 | 86.09 (7) | O1i—Na1—Na2 | 113.50 (6) |
| O3iv—Zn1—O7 | 100.98 (7) | C4i—Na1—Na2 | 65.27 (6) |
| O3—Zn1—O7 | 79.02 (7) | C8iv—Na1—Na2 | 157.96 (6) |
| O7iv—Zn1—O7 | 180.000 (1) | Na1i—Na1—Na2 | 81.11 (4) |
| O5iv—Zn1—Na1 | 35.88 (5) | O5iv—Na1—Zn1 | 32.08 (5) |
| O5—Zn1—Na1 | 144.12 (5) | O1—Na1—Zn1 | 90.68 (6) |
| O3iv—Zn1—Na1 | 115.73 (5) | O4i—Na1—Zn1 | 151.83 (6) |
| O3—Zn1—Na1 | 64.27 (5) | O6vi—Na1—Zn1 | 113.43 (6) |
| O7iv—Zn1—Na1 | 115.05 (6) | O1i—Na1—Zn1 | 89.37 (5) |
| O7—Zn1—Na1 | 64.95 (6) | C4i—Na1—Zn1 | 152.38 (6) |
| O5iv—Zn1—Na1iv | 144.12 (5) | C8iv—Na1—Zn1 | 53.66 (5) |
| O5—Zn1—Na1iv | 35.88 (5) | Na1i—Na1—Zn1 | 90.01 (4) |
| O3iv—Zn1—Na1iv | 64.27 (5) | Na2—Na1—Zn1 | 133.42 (4) |
| O3—Zn1—Na1iv | 115.73 (5) | O5iv—Na1—Na2ix | 86.09 (5) |
| O7iv—Zn1—Na1iv | 64.95 (6) | O1—Na1—Na2ix | 150.32 (6) |
| O7—Zn1—Na1iv | 115.05 (6) | O4i—Na1—Na2ix | 40.74 (5) |
| Na1—Zn1—Na1iv | 180.0 | O6vi—Na1—Na2ix | 79.96 (6) |
| O4v—Na2—O3i | 100.76 (7) | O1i—Na1—Na2ix | 93.45 (6) |
| O4v—Na2—O6vi | 92.41 (7) | C4i—Na1—Na2ix | 66.06 (6) |
| O3i—Na2—O6vi | 98.70 (7) | C8iv—Na1—Na2ix | 64.99 (5) |
| O4v—Na2—O2 | 132.94 (7) | Na1i—Na1—Na2ix | 131.30 (6) |
| O3i—Na2—O2 | 125.58 (7) | Na2—Na1—Na2ix | 101.14 (3) |
| O6vi—Na2—O2 | 88.62 (7) | Zn1—Na1—Na2ix | 118.12 (3) |
| O4v—Na2—O2vii | 86.70 (7) | C1—O1—Na1 | 134.25 (16) |
| O3i—Na2—O2vii | 102.18 (7) | C1—O1—Na1i | 133.31 (16) |
| O6vi—Na2—O2vii | 158.90 (8) | Na1—O1—Na1i | 86.09 (7) |
| O2—Na2—O2vii | 76.80 (7) | C1—O1—Na2 | 92.17 (15) |
| O4v—Na2—O1 | 168.90 (7) | Na1—O1—Na2 | 85.84 (6) |
| O3i—Na2—O1 | 77.54 (7) | Na1i—O1—Na2 | 117.27 (8) |
| O6vi—Na2—O1 | 77.12 (7) | O1—C1—O2 | 123.1 (2) |
| O2—Na2—O1 | 51.60 (6) | O1—C1—C2 | 120.3 (2) |
| O2vii—Na2—O1 | 104.40 (7) | O2—C1—C2 | 116.6 (2) |
| O4v—Na2—Na1 | 125.09 (6) | Zn1—O7—H1 | 115 (2) |
| O3i—Na2—Na1 | 62.16 (5) | C3—O7—H1 | 108.9 (16) |
| O6vi—Na2—Na1 | 46.67 (5) | C1—C2—H2A | 109 |
| O2—Na2—Na1 | 87.87 (5) | C1—C2—H2B | 109 |
| O2vii—Na2—Na1 | 145.37 (6) | C3—C2—H2A | 108 |
| O1—Na2—Na1 | 44.35 (5) | C3—C2—H2B | 109 |
| O4v—Na2—Na1viii | 40.79 (5) | H2A—C2—H2B | 108 |
| O3i—Na2—Na1viii | 123.00 (6) | C3—C5—H5A | 107 |
| O6vi—Na2—Na1viii | 57.61 (5) | C3—C5—H5B | 108 |
| O2—Na2—Na1viii | 106.39 (6) | C8—C5—H5A | 107 |
| O2vii—Na2—Na1viii | 111.68 (5) | C8—C5—H5B | 108 |
| O1—Na2—Na1viii | 131.31 (6) | H5A—C5—H5B | 107 |
| H··· | ||||
| O7—H1···O2x | 0.95 (3) | 1.69 (3) | 2.635 (2) | 174 (3) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O7—H1⋯O2i | 0.95 (3) | 1.69 (3) | 2.635 (2) | 174 (3) |
Symmetry code: (i) .