| Literature DB >> 24454135 |
Guang Yang1, Bruce C Noll2, Elena V Rybak-Akimova1.
Abstract
The title compound, C10H22N2 (2+)·2Br(-), was synthesized via reduction of 2,2'-dipyridyl with Ni-Al alloy/KOH, followed by separation of diastereoisomers (meso and rac) by recrystallization from ethanol. Although the two bridging C atoms are optically active, these two chiral centers adopt an (S,R) configuration; thus, the title compound contains an achiral meso form of 2,2'-bi-piperidine. Both of the piperidinium rings adopt chair conformations, and the two N atoms are trans to each other; an inversion center is located in the mid-point of the central C-C bond. The conformation of the organic moiety resembles that of 1,1'-bi(cyclo-hexa-ne). The organic di-ammonium cations are linked to each other through hydrogen bonding with bromide counter-ions, each of which forms two hydrogen bonds (N-H⋯Br) with two adjacent organic cations, thus linking the latter together in sheets parallel to (100).Entities:
Year: 2013 PMID: 24454135 PMCID: PMC3884359 DOI: 10.1107/S1600536813028754
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H22N22+·2Br− | |
| Monoclinic, | Mo |
| Cell parameters from 8775 reflections | |
| θ = 2.3–31.5° | |
| µ = 6.25 mm−1 | |
| β = 92.134 (1)° | |
| Plate, clear colorless | |
| 0.55 × 0.23 × 0.10 mm |
| Bruker D8 QUEST CMOS diffractometer | 2155 independent reflections |
| Radiation source: sealed tube, Siemens KFFMO2K-90 | 1955 reflections with |
| Curved graphite monochromator | |
| φ and ω scans | θmax = 31.5°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 12426 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: mixed | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2155 reflections | (Δ/σ)max = 0.001 |
| 70 parameters | Δρmax = 0.88 e Å−3 |
| 0 restraints | Δρmin = −0.24 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| N1 | 0.15631 (5) | 0.83374 (10) | 0.52604 (14) | 0.00987 (17) | |
| H1A | 0.1668 (8) | 0.9229 (17) | 0.500 (2) | 0.012* | |
| H1B | 0.1566 (9) | 0.8270 (15) | 0.645 (2) | 0.012* | |
| C1 | 0.21196 (6) | 0.73540 (11) | 0.45193 (15) | 0.00905 (18) | |
| H1 | 0.2159 | 0.7519 | 0.3186 | 0.011* | |
| C2 | 0.18497 (6) | 0.58942 (11) | 0.48165 (17) | 0.0123 (2) | |
| H2A | 0.1854 | 0.5699 | 0.6136 | 0.015* | |
| H2B | 0.2195 | 0.5245 | 0.4249 | 0.015* | |
| C3 | 0.10648 (6) | 0.56754 (12) | 0.40071 (17) | 0.0136 (2) | |
| H3A | 0.0903 | 0.4725 | 0.4243 | 0.016* | |
| H3B | 0.1063 | 0.5813 | 0.2675 | 0.016* | |
| C4 | 0.05255 (6) | 0.66795 (12) | 0.48479 (17) | 0.0133 (2) | |
| H4A | 0.002 | 0.6545 | 0.4298 | 0.016* | |
| H4B | 0.0505 | 0.6505 | 0.6169 | 0.016* | |
| C5 | 0.07765 (6) | 0.81376 (12) | 0.45314 (16) | 0.0126 (2) | |
| H5A | 0.0749 | 0.8341 | 0.3213 | 0.015* | |
| H5B | 0.0441 | 0.8779 | 0.5144 | 0.015* | |
| Br1 | 0.14264 (2) | 0.83601 (2) | 0.96230 (2) | 0.01383 (5) |
| N1 | 0.0097 (4) | 0.0102 (4) | 0.0097 (4) | −0.0001 (3) | 0.0005 (3) | −0.0007 (3) |
| C1 | 0.0087 (4) | 0.0093 (4) | 0.0092 (4) | 0.0003 (4) | 0.0004 (3) | −0.0005 (4) |
| C2 | 0.0110 (5) | 0.0093 (5) | 0.0165 (5) | −0.0010 (4) | −0.0010 (4) | 0.0000 (4) |
| C3 | 0.0104 (5) | 0.0128 (5) | 0.0176 (5) | −0.0025 (4) | −0.0005 (4) | −0.0009 (4) |
| C4 | 0.0095 (5) | 0.0147 (5) | 0.0158 (5) | −0.0018 (4) | 0.0016 (4) | 0.0004 (4) |
| C5 | 0.0090 (5) | 0.0142 (5) | 0.0144 (5) | 0.0008 (4) | −0.0006 (4) | 0.0002 (4) |
| Br1 | 0.01971 (7) | 0.01159 (7) | 0.01027 (6) | −0.00222 (4) | 0.00163 (4) | −0.00018 (4) |
| N1—C1 | 1.5036 (14) | C2—H2B | 0.99 |
| N1—C5 | 1.5060 (15) | C3—C4 | 1.5260 (17) |
| N1—H1A | 0.913 (16) | C3—H3A | 0.99 |
| N1—H1B | 0.880 (18) | C3—H3B | 0.99 |
| C1—C2 | 1.5243 (16) | C4—C5 | 1.5143 (16) |
| C1—C1i | 1.543 (2) | C4—H4A | 0.99 |
| C1—H1 | 1.0 | C4—H4B | 0.99 |
| C2—C3 | 1.5259 (16) | C5—H5A | 0.99 |
| C2—H2A | 0.99 | C5—H5B | 0.99 |
| C1—N1—C5 | 114.59 (9) | C2—C3—C4 | 110.09 (9) |
| C1—N1—H1A | 112.7 (10) | C2—C3—H3A | 109.6 |
| C5—N1—H1A | 104.3 (10) | C4—C3—H3A | 109.6 |
| C1—N1—H1B | 109.6 (10) | C2—C3—H3B | 109.6 |
| C5—N1—H1B | 108.4 (11) | C4—C3—H3B | 109.6 |
| H1A—N1—H1B | 106.8 (13) | H3A—C3—H3B | 108.2 |
| N1—C1—C2 | 109.01 (9) | C5—C4—C3 | 110.15 (9) |
| N1—C1—C1i | 107.79 (11) | C5—C4—H4A | 109.6 |
| C2—C1—C1i | 112.85 (11) | C3—C4—H4A | 109.6 |
| N1—C1—H1 | 109.0 | C5—C4—H4B | 109.6 |
| C2—C1—H1 | 109.0 | C3—C4—H4B | 109.6 |
| C1i—C1—H1 | 109.0 | H4A—C4—H4B | 108.1 |
| C1—C2—C3 | 111.68 (9) | N1—C5—C4 | 110.36 (9) |
| C1—C2—H2A | 109.3 | N1—C5—H5A | 109.6 |
| C3—C2—H2A | 109.3 | C4—C5—H5A | 109.6 |
| C1—C2—H2B | 109.3 | N1—C5—H5B | 109.6 |
| C3—C2—H2B | 109.3 | C4—C5—H5B | 109.6 |
| H2A—C2—H2B | 107.9 | H5A—C5—H5B | 108.1 |
| C5—N1—C1—C2 | −54.03 (12) | C1—C2—C3—C4 | −58.25 (13) |
| C5—N1—C1—C1i | −176.84 (11) | C2—C3—C4—C5 | 58.08 (13) |
| N1—C1—C2—C3 | 54.76 (12) | C1—N1—C5—C4 | 55.44 (12) |
| C1i—C1—C2—C3 | 174.49 (11) | C3—C4—C5—N1 | −55.86 (13) |
| H··· | ||||
| N1—H1 | 0.913 (16) | 2.408 (16) | 3.2670 (10) | 156.7 (13) |
| N1—H1 | 0.880 (18) | 2.359 (18) | 3.2311 (10) | 170.9 (14) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.913 (16) | 2.408 (16) | 3.2670 (10) | 156.7 (13) |
| N1—H1 | 0.880 (18) | 2.359 (18) | 3.2311 (10) | 170.9 (14) |
Symmetry code: (i) .