Literature DB >> 24454127

6-(4-Chloro-phen-yl)-3-methyl-imidazo[2,1-b]thia-zole.

Alexander S Bunev1, Elena V Sukhonosova2, Vladimir E Statsyuk1, Gennady I Ostapenko1, Victor N Khrustalev3.   

Abstract

In the title compound, C12H9ClN2S, the imidazo[2,1-b]thia-zole fragment is planar (r.m.s. deviation = 0.003 Å), and the benzene ring is twisted slightly [by 5.65 (6)°] relative to this moiety. In the crystal, mol-ecules are linked by π-π stacking inter-actions into columns along [010]. The mol-ecules within the columns are arranged alternatively by their planar rotation of 180°. Thus, in the columns, there are the two types of π-π stacking inter-actions, namely, (i) between two imidazo[2,1-b]thia-zole fragments [inter-planar distance = 3.351 (2) Å] and (ii) between an imidazo[2,1-b]thia-zole fragment and the phenyl ring [inter-planar distance = 3.410 (5) Å]. There are no short contacts between the columns.

Entities:  

Year:  2013        PMID: 24454127      PMCID: PMC3884351          DOI: 10.1107/S1600536813028833

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and properties of related compounds containing an imidazo[2,1-b]thia­zole moiety, see: Raeymaekers et al. (1966 ▶); Metaye et al. (1992 ▶); Carpenter et al. (2003 ▶); Milne et al. (2007 ▶); Scribner et al. (2008 ▶); Chorell et al. (2010 ▶); Guzeldemirci & Kucukbasmaci (2010 ▶); Budriesi et al. (2011 ▶); Yousefi et al. (2011 ▶).

Experimental

Crystal data

C12H9ClN2S M = 248.73 Triclinic, a = 7.0624 (5) Å b = 7.7132 (5) Å c = 10.3460 (7) Å α = 93.353 (1)° β = 90.107 (1)° γ = 98.832 (1)° V = 555.92 (7) Å3 Z = 2 Mo Kα radiation μ = 0.50 mm−1 T = 120 K 0.30 × 0.20 × 0.20 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2003 ▶) T min = 0.864, T max = 0.906 6927 measured reflections 2963 independent reflections 2306 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.093 S = 1.05 2963 reflections 146 parameters H-atom parameters constrained Δρmax = 0.38 e Å−3 Δρmin = −0.22 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813028833/rk2417sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813028833/rk2417Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813028833/rk2417Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H9ClN2SZ = 2
Mr = 248.73F(000) = 256
Triclinic, P1Dx = 1.486 Mg m3
Hall symbol: -P 1Melting point = 397–399 K
a = 7.0624 (5) ÅMo Kα radiation, λ = 0.71073 Å
b = 7.7132 (5) ÅCell parameters from 2226 reflections
c = 10.3460 (7) Åθ = 2.7–30.6°
α = 93.353 (1)°µ = 0.50 mm1
β = 90.107 (1)°T = 120 K
γ = 98.832 (1)°Prism, colourless
V = 555.92 (7) Å30.30 × 0.20 × 0.20 mm
Bruker APEXII CCD diffractometer2963 independent reflections
Radiation source: fine-focus sealed tube2306 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.032
φ and ω scansθmax = 29.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2003)h = −9→9
Tmin = 0.864, Tmax = 0.906k = −10→10
6927 measured reflectionsl = −14→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.093H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0461P)2 + 0.0291P] where P = (Fo2 + 2Fc2)/3
2963 reflections(Δ/σ)max = 0.001
146 parametersΔρmax = 0.38 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.38211 (8)0.73973 (6)1.00250 (4)0.04269 (15)
S10.13039 (6)0.04797 (6)0.19530 (4)0.02548 (12)
C2−0.1162 (2)−0.0288 (2)0.18876 (16)0.0239 (3)
H2−0.1768−0.10110.11840.029*
C3−0.2120 (2)0.0238 (2)0.29218 (15)0.0203 (3)
N4−0.08638 (17)0.12958 (16)0.37993 (12)0.0180 (3)
C5−0.0956 (2)0.21865 (19)0.49862 (14)0.0189 (3)
H5−0.20630.22550.54950.023*
C60.0896 (2)0.29557 (19)0.52765 (14)0.0190 (3)
N70.21503 (18)0.25589 (17)0.42952 (12)0.0204 (3)
C7A0.1018 (2)0.1576 (2)0.34408 (15)0.0201 (3)
C8−0.4178 (2)−0.0182 (2)0.32472 (17)0.0258 (3)
H8A−0.4875−0.08630.25180.039*
H8B−0.47040.09110.34220.039*
H8C−0.4314−0.08730.40170.039*
C90.1606 (2)0.40574 (19)0.64315 (14)0.0188 (3)
C100.0334 (2)0.4576 (2)0.73671 (15)0.0230 (3)
H10−0.10060.42200.72460.028*
C110.1012 (3)0.5600 (2)0.84631 (16)0.0272 (4)
H110.01420.59550.90870.033*
C120.2971 (3)0.6103 (2)0.86436 (15)0.0271 (4)
C130.4260 (2)0.5626 (2)0.77325 (16)0.0265 (4)
H130.55980.59850.78600.032*
C140.3567 (2)0.4617 (2)0.66341 (15)0.0222 (3)
H140.44450.42980.60020.027*
U11U22U33U12U13U23
Cl10.0636 (3)0.0379 (3)0.0254 (2)0.0095 (2)−0.0140 (2)−0.01208 (19)
S10.0251 (2)0.0306 (2)0.0207 (2)0.00669 (17)0.00010 (15)−0.00563 (16)
C20.0266 (8)0.0227 (8)0.0224 (8)0.0048 (7)−0.0059 (6)−0.0019 (6)
C30.0214 (7)0.0173 (7)0.0225 (8)0.0040 (6)−0.0064 (6)0.0014 (6)
N40.0190 (6)0.0166 (6)0.0190 (6)0.0045 (5)−0.0015 (5)0.0008 (5)
C50.0220 (7)0.0181 (7)0.0172 (7)0.0053 (6)0.0011 (6)0.0017 (6)
C60.0230 (8)0.0173 (7)0.0176 (7)0.0054 (6)0.0003 (6)0.0019 (6)
N70.0199 (6)0.0221 (6)0.0191 (6)0.0034 (5)0.0004 (5)−0.0007 (5)
C7A0.0211 (7)0.0215 (7)0.0187 (7)0.0064 (6)0.0011 (6)0.0007 (6)
C80.0212 (8)0.0263 (8)0.0292 (9)0.0027 (7)−0.0041 (6)−0.0027 (7)
C90.0253 (8)0.0142 (7)0.0172 (7)0.0028 (6)−0.0018 (6)0.0031 (6)
C100.0275 (8)0.0190 (7)0.0230 (8)0.0049 (6)0.0014 (6)0.0027 (6)
C110.0417 (10)0.0228 (8)0.0192 (8)0.0107 (7)0.0030 (7)0.0021 (6)
C120.0438 (10)0.0193 (7)0.0178 (7)0.0047 (7)−0.0072 (7)−0.0019 (6)
C130.0321 (9)0.0218 (8)0.0249 (8)0.0010 (7)−0.0067 (7)0.0027 (7)
C140.0262 (8)0.0199 (7)0.0200 (7)0.0019 (6)0.0000 (6)0.0022 (6)
Cl1—C121.7450 (17)C8—H8A0.9800
S1—C7A1.7399 (16)C8—H8B0.9800
S1—C21.7512 (17)C8—H8C0.9800
C2—C31.343 (2)C9—C141.397 (2)
C2—H20.9500C9—C101.404 (2)
C3—N41.4018 (19)C10—C111.384 (2)
C3—C81.483 (2)C10—H100.9500
N4—C7A1.3685 (19)C11—C121.388 (2)
N4—C51.3782 (19)C11—H110.9500
C5—C61.376 (2)C12—C131.385 (2)
C5—H50.9500C13—C141.383 (2)
C6—N71.3996 (18)C13—H130.9500
C6—C91.466 (2)C14—H140.9500
N7—C7A1.315 (2)
C7A—S1—C289.68 (7)H8A—C8—H8B109.5
C3—C2—S1113.96 (12)C3—C8—H8C109.5
C3—C2—H2123.0H8A—C8—H8C109.5
S1—C2—H2123.0H8B—C8—H8C109.5
C2—C3—N4110.46 (14)C14—C9—C10118.13 (14)
C2—C3—C8130.15 (15)C14—C9—C6120.96 (14)
N4—C3—C8119.35 (13)C10—C9—C6120.91 (14)
C7A—N4—C5106.48 (12)C11—C10—C9120.71 (16)
C7A—N4—C3115.56 (13)C11—C10—H10119.6
C5—N4—C3137.96 (13)C9—C10—H10119.6
C6—C5—N4105.33 (12)C10—C11—C12119.54 (15)
C6—C5—H5127.3C10—C11—H11120.2
N4—C5—H5127.3C12—C11—H11120.2
C5—C6—N7111.17 (13)C13—C12—C11121.06 (15)
C5—C6—C9128.03 (14)C13—C12—Cl1119.50 (14)
N7—C6—C9120.79 (14)C11—C12—Cl1119.43 (13)
C7A—N7—C6103.37 (12)C14—C13—C12118.94 (16)
N7—C7A—N4113.65 (13)C14—C13—H13120.5
N7—C7A—S1136.01 (12)C12—C13—H13120.5
N4—C7A—S1110.33 (11)C13—C14—C9121.60 (15)
C3—C8—H8A109.5C13—C14—H14119.2
C3—C8—H8B109.5C9—C14—H14119.2
C7A—S1—C2—C3−0.51 (13)C3—N4—C7A—S1−0.54 (16)
S1—C2—C3—N40.30 (17)C2—S1—C7A—N7179.01 (17)
S1—C2—C3—C8−177.40 (14)C2—S1—C7A—N40.57 (12)
C2—C3—N4—C7A0.17 (19)C5—C6—C9—C14174.39 (15)
C8—C3—N4—C7A178.15 (13)N7—C6—C9—C14−5.4 (2)
C2—C3—N4—C5−179.57 (16)C5—C6—C9—C10−5.4 (2)
C8—C3—N4—C5−1.6 (3)N7—C6—C9—C10174.78 (14)
C7A—N4—C5—C6−0.14 (16)C14—C9—C10—C11−0.6 (2)
C3—N4—C5—C6179.61 (16)C6—C9—C10—C11179.28 (14)
N4—C5—C6—N7−0.20 (17)C9—C10—C11—C12−0.7 (2)
N4—C5—C6—C9−179.99 (14)C10—C11—C12—C131.2 (2)
C5—C6—N7—C7A0.46 (16)C10—C11—C12—Cl1179.89 (12)
C9—C6—N7—C7A−179.73 (13)C11—C12—C13—C14−0.6 (2)
C6—N7—C7A—N4−0.56 (17)Cl1—C12—C13—C14−179.23 (12)
C6—N7—C7A—S1−178.95 (14)C12—C13—C14—C9−0.7 (2)
C5—N4—C7A—N70.46 (17)C10—C9—C14—C131.2 (2)
C3—N4—C7A—N7−179.35 (12)C6—C9—C14—C13−178.60 (14)
C5—N4—C7A—S1179.27 (10)
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