| Literature DB >> 24454097 |
Mehmet Akkurt1, Joel T Mague2, Shaaban K Mohamed3, Antar A Abelhamid4, Mustafa R Albayati5.
Abstract
The conformation adopted by the title compound, C20H21N3O3, in the crystal is 'J'-shaped and appears to be at least partially directed by a weak intra-molecular C-H⋯N hydrogen bond. In the crystal, mol-ecules are linked by N-H⋯O hydrogen bonds, forming dimers with R 2 (2)(8) motifs. Furthermore, these dimers connect to each other via C-H⋯O and N-H⋯O hydrogen bonds to form a three-dimensional network.Entities:
Year: 2013 PMID: 24454097 PMCID: PMC3884321 DOI: 10.1107/S1600536813027050
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H21N3O3 | |
| Triclinic, | |
| Hall symbol: -P 1 | Cu |
| Cell parameters from 6305 reflections | |
| θ = 3.8–68.2° | |
| µ = 0.74 mm−1 | |
| α = 107.983 (2)° | |
| β = 92.451 (2)° | Block, colourless |
| γ = 97.882 (2)° | 0.14 × 0.12 × 0.08 mm |
| Bruker D8 VENTURE PHOTON 100 CMOS diffractometer | 3121 independent reflections |
| Radiation source: INCOATEC IµS micro–focus source | 2579 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.4167 pixels mm-1 | θmax = 68.2°, θmin = 3.8° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 8928 measured reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
| (Δ/σ)max = 0.001 | |
| Δρmax = 0.19 e Å−3 | |
| 3121 reflections | Δρmin = −0.18 e Å−3 |
| 246 parameters |
| Geometry. Bond distances, angles |
| Refinement. Refinement on |
| O1 | 0.71418 (17) | 0.52381 (11) | 0.54515 (9) | 0.0430 (4) | |
| O2 | 0.98707 (13) | 0.84392 (9) | 1.03898 (8) | 0.0292 (3) | |
| O3 | −0.13304 (14) | 0.95693 (11) | 0.60125 (9) | 0.0371 (3) | |
| N1 | 0.79353 (17) | 0.35490 (13) | 0.91900 (12) | 0.0351 (4) | |
| N2 | 0.76381 (16) | 0.90476 (12) | 0.94351 (10) | 0.0260 (3) | |
| N3 | 0.58416 (16) | 0.88308 (12) | 0.89050 (9) | 0.0265 (3) | |
| C1 | 0.7349 (3) | 0.44162 (19) | 0.43283 (14) | 0.0480 (6) | |
| C2 | 0.7324 (2) | 0.46796 (15) | 0.63133 (13) | 0.0345 (5) | |
| C3 | 0.7787 (2) | 0.33672 (16) | 0.61512 (15) | 0.0388 (5) | |
| C4 | 0.7991 (2) | 0.28921 (15) | 0.70661 (15) | 0.0384 (5) | |
| C5 | 0.7752 (2) | 0.37351 (15) | 0.81367 (14) | 0.0326 (4) | |
| C6 | 0.72832 (19) | 0.50583 (14) | 0.83158 (13) | 0.0296 (4) | |
| C7 | 0.7039 (2) | 0.55117 (15) | 0.73782 (13) | 0.0310 (4) | |
| C8 | 0.7797 (2) | 0.48079 (17) | 1.12353 (14) | 0.0379 (5) | |
| C9 | 0.76673 (19) | 0.47320 (15) | 1.00178 (14) | 0.0317 (5) | |
| C10 | 0.72383 (19) | 0.56677 (14) | 0.95159 (12) | 0.0281 (4) | |
| C11 | 0.67910 (19) | 0.70663 (14) | 1.01121 (12) | 0.0284 (4) | |
| C12 | 0.82053 (19) | 0.82164 (14) | 0.99829 (11) | 0.0256 (4) | |
| C13 | 0.5515 (2) | 0.97217 (14) | 0.84341 (11) | 0.0272 (4) | |
| C14 | 0.3702 (2) | 0.96285 (14) | 0.78169 (11) | 0.0269 (4) | |
| C15 | 0.2179 (2) | 0.86146 (14) | 0.77499 (12) | 0.0290 (4) | |
| C16 | 0.0484 (2) | 0.85462 (15) | 0.71417 (12) | 0.0302 (4) | |
| C17 | 0.0283 (2) | 0.95182 (15) | 0.66076 (12) | 0.0296 (4) | |
| C18 | 0.1787 (2) | 1.05399 (15) | 0.66754 (12) | 0.0322 (5) | |
| C19 | 0.3475 (2) | 1.05862 (15) | 0.72627 (12) | 0.0305 (5) | |
| C20 | −0.2801 (2) | 0.84238 (17) | 0.57471 (14) | 0.0380 (5) | |
| H1 | 0.855 (3) | 0.295 (2) | 0.9360 (16) | 0.052 (5)* | |
| H1A | 0.86220 | 0.41770 | 0.42890 | 0.0720* | |
| H1B | 0.71490 | 0.49270 | 0.38010 | 0.0720* | |
| H1C | 0.64190 | 0.35780 | 0.41200 | 0.0720* | |
| H2 | 0.847 (2) | 0.9799 (18) | 0.9426 (14) | 0.037 (4)* | |
| H3 | 0.79600 | 0.28050 | 0.54110 | 0.0470* | |
| H4 | 0.82900 | 0.20030 | 0.69610 | 0.0460* | |
| H7 | 0.66820 | 0.63830 | 0.74730 | 0.0370* | |
| H8A | 0.66310 | 0.43210 | 1.13970 | 0.0570* | |
| H8B | 0.79780 | 0.57680 | 1.17140 | 0.0570* | |
| H8C | 0.88670 | 0.43840 | 1.13960 | 0.0570* | |
| H11A | 0.67420 | 0.71790 | 1.09300 | 0.0340* | |
| H11B | 0.55260 | 0.71370 | 0.98090 | 0.0340* | |
| H13 | 0.64810 | 1.04650 | 0.84880 | 0.0330* | |
| H15 | 0.23020 | 0.79590 | 0.81260 | 0.0350* | |
| H16 | −0.05350 | 0.78380 | 0.70910 | 0.0360* | |
| H18 | 0.16500 | 1.12090 | 0.63150 | 0.0390* | |
| H19 | 0.45010 | 1.12800 | 0.72920 | 0.0370* | |
| H20A | −0.23210 | 0.75960 | 0.53170 | 0.0570* | |
| H20B | −0.38450 | 0.85740 | 0.52910 | 0.0570* | |
| H20C | −0.32500 | 0.83130 | 0.64510 | 0.0570* |
| O1 | 0.0543 (7) | 0.0399 (6) | 0.0312 (6) | 0.0116 (5) | 0.0040 (5) | 0.0044 (5) |
| O2 | 0.0263 (5) | 0.0249 (5) | 0.0361 (5) | 0.0024 (4) | −0.0050 (4) | 0.0112 (4) |
| O3 | 0.0322 (6) | 0.0354 (6) | 0.0412 (6) | 0.0052 (5) | −0.0101 (5) | 0.0103 (5) |
| N1 | 0.0263 (7) | 0.0250 (7) | 0.0565 (9) | 0.0034 (5) | −0.0021 (6) | 0.0177 (6) |
| N2 | 0.0243 (6) | 0.0238 (6) | 0.0290 (6) | 0.0014 (5) | −0.0035 (5) | 0.0091 (5) |
| N3 | 0.0257 (6) | 0.0267 (6) | 0.0251 (6) | 0.0044 (5) | −0.0018 (5) | 0.0060 (5) |
| C1 | 0.0488 (11) | 0.0495 (10) | 0.0348 (9) | 0.0063 (8) | 0.0034 (8) | −0.0016 (8) |
| C2 | 0.0298 (8) | 0.0309 (8) | 0.0389 (8) | 0.0030 (6) | 0.0015 (6) | 0.0063 (7) |
| C3 | 0.0322 (8) | 0.0288 (8) | 0.0469 (9) | 0.0022 (6) | 0.0044 (7) | 0.0007 (7) |
| C4 | 0.0269 (8) | 0.0232 (8) | 0.0604 (11) | 0.0041 (6) | 0.0038 (7) | 0.0064 (7) |
| C5 | 0.0217 (7) | 0.0253 (7) | 0.0494 (9) | 0.0010 (6) | −0.0006 (6) | 0.0117 (7) |
| C6 | 0.0201 (7) | 0.0245 (7) | 0.0421 (8) | 0.0007 (5) | −0.0014 (6) | 0.0093 (6) |
| C7 | 0.0271 (8) | 0.0257 (7) | 0.0383 (8) | 0.0038 (6) | −0.0007 (6) | 0.0079 (6) |
| C8 | 0.0301 (8) | 0.0363 (9) | 0.0516 (10) | −0.0003 (6) | −0.0071 (7) | 0.0240 (8) |
| C9 | 0.0199 (7) | 0.0287 (8) | 0.0469 (9) | −0.0017 (6) | −0.0035 (6) | 0.0159 (7) |
| C10 | 0.0212 (7) | 0.0250 (7) | 0.0388 (8) | 0.0006 (5) | −0.0021 (6) | 0.0131 (6) |
| C11 | 0.0266 (7) | 0.0280 (8) | 0.0312 (7) | 0.0028 (6) | −0.0002 (6) | 0.0113 (6) |
| C12 | 0.0275 (8) | 0.0227 (7) | 0.0246 (7) | 0.0053 (6) | 0.0004 (6) | 0.0044 (6) |
| C13 | 0.0298 (8) | 0.0240 (7) | 0.0266 (7) | 0.0031 (6) | 0.0004 (6) | 0.0072 (6) |
| C14 | 0.0297 (8) | 0.0257 (7) | 0.0237 (7) | 0.0063 (6) | 0.0006 (6) | 0.0049 (6) |
| C15 | 0.0323 (8) | 0.0250 (7) | 0.0301 (7) | 0.0063 (6) | 0.0008 (6) | 0.0089 (6) |
| C16 | 0.0284 (8) | 0.0257 (7) | 0.0336 (8) | 0.0026 (6) | 0.0015 (6) | 0.0060 (6) |
| C17 | 0.0296 (8) | 0.0303 (8) | 0.0264 (7) | 0.0094 (6) | −0.0022 (6) | 0.0042 (6) |
| C18 | 0.0362 (8) | 0.0313 (8) | 0.0316 (8) | 0.0066 (6) | −0.0019 (6) | 0.0136 (7) |
| C19 | 0.0298 (8) | 0.0301 (8) | 0.0316 (8) | 0.0026 (6) | −0.0004 (6) | 0.0111 (6) |
| C20 | 0.0293 (8) | 0.0443 (9) | 0.0367 (8) | 0.0029 (7) | −0.0040 (6) | 0.0098 (7) |
| O1—C1 | 1.422 (2) | C14—C15 | 1.393 (2) |
| O1—C2 | 1.3776 (19) | C15—C16 | 1.388 (2) |
| O2—C12 | 1.2422 (17) | C16—C17 | 1.390 (2) |
| O3—C17 | 1.3653 (18) | C17—C18 | 1.389 (2) |
| O3—C20 | 1.425 (2) | C18—C19 | 1.377 (2) |
| N1—C5 | 1.386 (2) | C1—H1A | 0.9800 |
| N1—C9 | 1.383 (2) | C1—H1B | 0.9800 |
| N2—N3 | 1.3818 (16) | C1—H1C | 0.9800 |
| N2—C12 | 1.3475 (19) | C3—H3 | 0.9500 |
| N3—C13 | 1.2810 (19) | C4—H4 | 0.9500 |
| N1—H1 | 0.88 (2) | C7—H7 | 0.9500 |
| N2—H2 | 0.920 (18) | C8—H8A | 0.9800 |
| C2—C3 | 1.406 (2) | C8—H8B | 0.9800 |
| C2—C7 | 1.382 (2) | C8—H8C | 0.9800 |
| C3—C4 | 1.384 (2) | C11—H11A | 0.9900 |
| C4—C5 | 1.383 (2) | C11—H11B | 0.9900 |
| C5—C6 | 1.415 (2) | C13—H13 | 0.9500 |
| C6—C10 | 1.434 (2) | C15—H15 | 0.9500 |
| C6—C7 | 1.400 (2) | C16—H16 | 0.9500 |
| C8—C9 | 1.490 (2) | C18—H18 | 0.9500 |
| C9—C10 | 1.369 (2) | C19—H19 | 0.9500 |
| C10—C11 | 1.501 (2) | C20—H20A | 0.9800 |
| C11—C12 | 1.514 (2) | C20—H20B | 0.9800 |
| C13—C14 | 1.460 (2) | C20—H20C | 0.9800 |
| C14—C19 | 1.398 (2) | ||
| C1—O1—C2 | 118.05 (13) | C14—C19—C18 | 121.03 (14) |
| C17—O3—C20 | 117.85 (13) | O1—C1—H1A | 109.00 |
| C5—N1—C9 | 109.09 (13) | O1—C1—H1B | 109.00 |
| N3—N2—C12 | 122.52 (12) | O1—C1—H1C | 109.00 |
| N2—N3—C13 | 114.94 (12) | H1A—C1—H1B | 109.00 |
| C9—N1—H1 | 120.9 (12) | H1A—C1—H1C | 109.00 |
| C5—N1—H1 | 126.0 (13) | H1B—C1—H1C | 109.00 |
| N3—N2—H2 | 118.7 (10) | C2—C3—H3 | 120.00 |
| C12—N2—H2 | 118.8 (10) | C4—C3—H3 | 120.00 |
| O1—C2—C3 | 123.67 (14) | C3—C4—H4 | 121.00 |
| O1—C2—C7 | 115.23 (14) | C5—C4—H4 | 121.00 |
| C3—C2—C7 | 121.10 (15) | C2—C7—H7 | 120.00 |
| C2—C3—C4 | 120.20 (16) | C6—C7—H7 | 120.00 |
| C3—C4—C5 | 118.84 (15) | C9—C8—H8A | 109.00 |
| C4—C5—C6 | 121.74 (15) | C9—C8—H8B | 109.00 |
| N1—C5—C6 | 107.17 (14) | C9—C8—H8C | 110.00 |
| N1—C5—C4 | 131.07 (15) | H8A—C8—H8B | 109.00 |
| C5—C6—C10 | 107.06 (13) | H8A—C8—H8C | 109.00 |
| C7—C6—C10 | 134.17 (14) | H8B—C8—H8C | 109.00 |
| C5—C6—C7 | 118.73 (14) | C10—C11—H11A | 109.00 |
| C2—C7—C6 | 119.35 (15) | C10—C11—H11B | 109.00 |
| N1—C9—C8 | 120.08 (14) | C12—C11—H11A | 109.00 |
| N1—C9—C10 | 109.40 (14) | C12—C11—H11B | 109.00 |
| C8—C9—C10 | 130.47 (15) | H11A—C11—H11B | 108.00 |
| C6—C10—C11 | 126.49 (13) | N3—C13—H13 | 119.00 |
| C9—C10—C11 | 126.29 (13) | C14—C13—H13 | 119.00 |
| C6—C10—C9 | 107.22 (13) | C14—C15—H15 | 119.00 |
| C10—C11—C12 | 113.58 (12) | C16—C15—H15 | 119.00 |
| N2—C12—C11 | 119.29 (12) | C15—C16—H16 | 120.00 |
| O2—C12—N2 | 118.72 (13) | C17—C16—H16 | 120.00 |
| O2—C12—C11 | 121.97 (13) | C17—C18—H18 | 120.00 |
| N3—C13—C14 | 121.97 (13) | C19—C18—H18 | 120.00 |
| C13—C14—C19 | 119.12 (13) | C14—C19—H19 | 119.00 |
| C15—C14—C19 | 118.23 (13) | C18—C19—H19 | 119.00 |
| C13—C14—C15 | 122.65 (13) | O3—C20—H20A | 110.00 |
| C14—C15—C16 | 121.06 (14) | O3—C20—H20B | 109.00 |
| C15—C16—C17 | 119.73 (14) | O3—C20—H20C | 109.00 |
| O3—C17—C16 | 124.68 (14) | H20A—C20—H20B | 109.00 |
| C16—C17—C18 | 119.73 (13) | H20A—C20—H20C | 109.00 |
| O3—C17—C18 | 115.59 (14) | H20B—C20—H20C | 109.00 |
| C17—C18—C19 | 120.21 (15) | ||
| C1—O1—C2—C3 | 3.0 (2) | C10—C6—C7—C2 | 174.92 (15) |
| C1—O1—C2—C7 | −177.73 (15) | C7—C6—C10—C9 | −177.33 (16) |
| C20—O3—C17—C18 | 169.28 (13) | C5—C6—C7—C2 | −2.2 (2) |
| C20—O3—C17—C16 | −11.6 (2) | C5—C6—C10—C9 | 0.04 (16) |
| C9—N1—C5—C6 | −2.29 (16) | C8—C9—C10—C11 | 0.6 (3) |
| C5—N1—C9—C10 | 2.37 (17) | N1—C9—C10—C6 | −1.46 (16) |
| C9—N1—C5—C4 | 176.09 (16) | N1—C9—C10—C11 | 178.14 (13) |
| C5—N1—C9—C8 | −179.76 (13) | C8—C9—C10—C6 | −179.03 (15) |
| C12—N2—N3—C13 | 179.16 (13) | C6—C10—C11—C12 | −64.10 (18) |
| N3—N2—C12—C11 | −5.17 (19) | C9—C10—C11—C12 | 116.38 (16) |
| N3—N2—C12—O2 | 176.44 (12) | C10—C11—C12—O2 | −65.23 (17) |
| N2—N3—C13—C14 | 178.67 (12) | C10—C11—C12—N2 | 116.43 (14) |
| O1—C2—C3—C4 | 178.35 (14) | N3—C13—C14—C19 | −176.06 (13) |
| C7—C2—C3—C4 | −0.9 (2) | N3—C13—C14—C15 | 3.6 (2) |
| C3—C2—C7—C6 | 2.4 (2) | C13—C14—C19—C18 | −179.70 (13) |
| O1—C2—C7—C6 | −176.95 (13) | C15—C14—C19—C18 | 0.7 (2) |
| C2—C3—C4—C5 | −0.7 (2) | C13—C14—C15—C16 | −179.08 (13) |
| C3—C4—C5—N1 | −177.38 (15) | C19—C14—C15—C16 | 0.6 (2) |
| C3—C4—C5—C6 | 0.8 (2) | C14—C15—C16—C17 | −1.3 (2) |
| N1—C5—C6—C7 | 179.22 (13) | C15—C16—C17—C18 | 0.8 (2) |
| C4—C5—C6—C7 | 0.7 (2) | C15—C16—C17—O3 | −178.29 (13) |
| C4—C5—C6—C10 | −177.19 (14) | O3—C17—C18—C19 | 179.57 (13) |
| N1—C5—C6—C10 | 1.37 (16) | C16—C17—C18—C19 | 0.4 (2) |
| C7—C6—C10—C11 | 3.1 (3) | C17—C18—C19—C14 | −1.2 (2) |
| C5—C6—C10—C11 | −179.56 (13) |
| H··· | ||||
| N1—H1···O2i | 0.88 (2) | 2.04 (2) | 2.9212 (17) | 174.0 (18) |
| N2—H2···O2ii | 0.920 (18) | 1.988 (18) | 2.9025 (16) | 171.9 (15) |
| C4—H4···O3iii | 0.95 | 2.50 | 3.410 (2) | 161 |
| C11—H11 | 0.99 | 2.36 | 2.8373 (19) | 109 |
| C20—H20 | 0.98 | 2.49 | 3.215 (2) | 131 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1⋯O2i | 0.88 (2) | 2.04 (2) | 2.9212 (17) | 174.0 (18) |
| N2—H2⋯O2ii | 0.920 (18) | 1.988 (18) | 2.9025 (16) | 171.9 (15) |
| C4—H4⋯O3iii | 0.95 | 2.50 | 3.410 (2) | 161 |
| C11—H11 | 0.99 | 2.36 | 2.8373 (19) | 109 |
| C20—H20 | 0.98 | 2.49 | 3.215 (2) | 131 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .