| Literature DB >> 24454070 |
Dohyun Moon1, Md Abdus Subhan2, Jong-Ha Choi3.
Abstract
The asymmetric unit of title hydrated salt, C22H46N4 (2+)·2Cl(-)·4H2O, comprises half a centrosymmetric dication, one Cl(-) anion and two water mol-ecules of crystallization. The structure determination reveals that protonation has occurred at diagonally opposite amine N atoms, and that the dication features intra-molecular N-H⋯N hydrogen bonds. In the crystal, a three-dimensional artchitecture is formed by O-H⋯Cl/N and N-H⋯Cl/O hydrogen bonds.Entities:
Year: 2013 PMID: 24454070 PMCID: PMC3884294 DOI: 10.1107/S1600536813027232
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C22H46N42+·2Cl−·4H2O | |
| Monoclinic, | Synchrotron radiation, λ = 0.72000 Å |
| Cell parameters from 31113 reflections | |
| θ = 1.3–66.4° | |
| µ = 0.27 mm−1 | |
| β = 115.23 (3)° | |
| Block, colourless | |
| 0.31 × 0.28 × 0.25 mm |
| ADSC Q210 CCD area-detector diffractometer | 3663 independent reflections |
| Radiation source: PLSII 2D bending magnet | 3446 reflections with |
| Si(111) double crystal monochromator | |
| ω scan | θmax = 29.0°, θmin = 1.8° |
| Absorption correction: empirical (using intensity measurements) ( | |
| 13046 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3663 reflections | (Δ/σ)max < 0.001 |
| 178 parameters | Δρmax = 0.46 e Å−3 |
| 0 restraints | Δρmin = −0.35 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| N1 | 0.24338 (3) | 0.30241 (5) | 0.30460 (7) | 0.00545 (13) | |
| H1N1 | 0.2484 (6) | 0.3678 (10) | 0.3234 (13) | 0.013 (3)* | |
| H2N1 | 0.2370 (6) | 0.2756 (9) | 0.3766 (13) | 0.014 (3)* | |
| N2 | 0.34493 (3) | 0.23871 (5) | 0.55886 (7) | 0.00584 (14) | |
| H1N2 | 0.3460 (6) | 0.1738 (10) | 0.5533 (13) | 0.012 (3)* | |
| C1 | 0.18207 (4) | 0.28405 (6) | 0.17163 (8) | 0.00738 (15) | |
| H1A | 0.1831 | 0.2160 | 0.1398 | 0.009* | |
| H1B | 0.1819 | 0.3293 | 0.0981 | 0.009* | |
| C2 | 0.30641 (4) | 0.26138 (6) | 0.30527 (8) | 0.00612 (15) | |
| H2 | 0.3004 | 0.1891 | 0.2872 | 0.007* | |
| C3 | 0.32229 (4) | 0.30822 (7) | 0.19167 (8) | 0.01049 (16) | |
| H3A | 0.3289 | 0.3798 | 0.2083 | 0.013* | |
| H3B | 0.2844 | 0.2980 | 0.0990 | 0.013* | |
| C4 | 0.38574 (4) | 0.26195 (8) | 0.19333 (9) | 0.01451 (18) | |
| H4A | 0.3775 | 0.1916 | 0.1680 | 0.017* | |
| H4B | 0.3971 | 0.2947 | 0.1226 | 0.017* | |
| C5 | 0.44453 (4) | 0.27145 (8) | 0.33736 (9) | 0.01465 (18) | |
| H5A | 0.4836 | 0.2358 | 0.3377 | 0.018* | |
| H5B | 0.4569 | 0.3415 | 0.3572 | 0.018* | |
| C6 | 0.42661 (4) | 0.22968 (7) | 0.45105 (9) | 0.01216 (17) | |
| H6A | 0.4645 | 0.2403 | 0.5436 | 0.015* | |
| H6B | 0.4194 | 0.1580 | 0.4370 | 0.015* | |
| C7 | 0.36367 (4) | 0.27744 (6) | 0.44987 (8) | 0.00632 (15) | |
| H7 | 0.3718 | 0.3497 | 0.4651 | 0.008* | |
| C8 | 0.39051 (4) | 0.27036 (6) | 0.70259 (8) | 0.00656 (15) | |
| H8 | 0.4375 | 0.2635 | 0.7134 | 0.008* | |
| C9 | 0.38146 (4) | 0.20090 (6) | 0.80803 (8) | 0.00776 (15) | |
| H9A | 0.3820 | 0.1324 | 0.7770 | 0.009* | |
| H9B | 0.4203 | 0.2089 | 0.8998 | 0.009* | |
| C10 | 0.37854 (4) | 0.37876 (6) | 0.72406 (9) | 0.01032 (16) | |
| H10A | 0.3825 | 0.4182 | 0.6492 | 0.012* | |
| H10B | 0.3324 | 0.3865 | 0.7153 | 0.012* | |
| C11 | 0.42749 (5) | 0.41859 (7) | 0.86611 (10) | 0.01776 (19) | |
| H11A | 0.4227 | 0.3815 | 0.9408 | 0.027* | |
| H11B | 0.4179 | 0.4881 | 0.8734 | 0.027* | |
| H11C | 0.4733 | 0.4117 | 0.8753 | 0.027* | |
| Cl1 | 0.256487 (11) | 0.526092 (15) | 0.35905 (2) | 0.01378 (8) | |
| O1W | 0.16965 (4) | 0.51673 (5) | 0.02378 (8) | 0.01737 (15) | |
| H1O1 | 0.1926 (9) | 0.5195 (12) | 0.110 (2) | 0.038 (4)* | |
| H2O1 | 0.1952 (8) | 0.5022 (12) | −0.0111 (17) | 0.033 (4)* | |
| O2W | 0.52804 (5) | 0.02912 (8) | 0.40229 (12) | 0.0354 (2) | |
| H1O2 | 0.5693 (11) | 0.0172 (13) | 0.4382 (19) | 0.044 (5)* | |
| H2O2 | 0.512 (2) | 0.016 (3) | 0.328 (5) | 0.062 (14)* | 0.50 |
| H3O2 | 0.5140 (19) | 0.015 (3) | 0.457 (4) | 0.041 (10)* | 0.50 |
| N1 | 0.0030 (3) | 0.0080 (3) | 0.0048 (3) | −0.0006 (2) | 0.0011 (2) | −0.0001 (2) |
| N2 | 0.0045 (3) | 0.0083 (3) | 0.0045 (3) | −0.0011 (2) | 0.0017 (2) | −0.0001 (2) |
| C1 | 0.0037 (3) | 0.0124 (4) | 0.0044 (3) | −0.0012 (3) | 0.0001 (3) | 0.0005 (3) |
| C2 | 0.0030 (3) | 0.0095 (3) | 0.0061 (3) | 0.0000 (3) | 0.0021 (3) | −0.0009 (3) |
| C3 | 0.0072 (4) | 0.0190 (4) | 0.0057 (3) | −0.0013 (3) | 0.0032 (3) | 0.0007 (3) |
| C4 | 0.0084 (4) | 0.0291 (5) | 0.0080 (4) | −0.0005 (3) | 0.0054 (3) | −0.0023 (3) |
| C5 | 0.0058 (4) | 0.0308 (5) | 0.0093 (4) | −0.0008 (3) | 0.0050 (3) | −0.0001 (3) |
| C6 | 0.0050 (3) | 0.0232 (4) | 0.0093 (4) | 0.0032 (3) | 0.0040 (3) | 0.0019 (3) |
| C7 | 0.0032 (3) | 0.0109 (4) | 0.0049 (3) | −0.0011 (3) | 0.0018 (3) | 0.0000 (3) |
| C8 | 0.0036 (3) | 0.0099 (4) | 0.0053 (3) | −0.0008 (3) | 0.0010 (3) | −0.0002 (3) |
| C9 | 0.0041 (3) | 0.0111 (4) | 0.0069 (3) | 0.0010 (3) | 0.0012 (3) | 0.0023 (3) |
| C10 | 0.0131 (4) | 0.0091 (4) | 0.0081 (3) | −0.0011 (3) | 0.0039 (3) | −0.0007 (3) |
| C11 | 0.0209 (5) | 0.0151 (4) | 0.0129 (4) | −0.0049 (4) | 0.0030 (3) | −0.0055 (3) |
| Cl1 | 0.01970 (12) | 0.00834 (11) | 0.01508 (12) | −0.00076 (7) | 0.00912 (9) | 0.00064 (7) |
| O1W | 0.0187 (3) | 0.0182 (3) | 0.0168 (3) | 0.0023 (3) | 0.0092 (3) | 0.0010 (3) |
| O2W | 0.0226 (5) | 0.0488 (6) | 0.0330 (5) | 0.0101 (4) | 0.0101 (4) | 0.0081 (4) |
| N1—C2 | 1.4995 (10) | C6—C7 | 1.5320 (11) |
| N1—C1 | 1.5003 (12) | C6—H6A | 0.9900 |
| N1—H1N1 | 0.909 (13) | C6—H6B | 0.9900 |
| N1—H2N1 | 0.907 (13) | C7—H7 | 1.0000 |
| N2—C7 | 1.4774 (10) | C8—C10 | 1.5333 (12) |
| N2—C8 | 1.4842 (11) | C8—C9 | 1.5381 (11) |
| N2—H1N2 | 0.887 (13) | C8—H8 | 1.0000 |
| C1—C9i | 1.5234 (11) | C9—C1i | 1.5233 (11) |
| C1—H1A | 0.9900 | C9—H9A | 0.9900 |
| C1—H1B | 0.9900 | C9—H9B | 0.9900 |
| C2—C3 | 1.5264 (11) | C10—C11 | 1.5276 (13) |
| C2—C7 | 1.5285 (12) | C10—H10A | 0.9900 |
| C2—H2 | 1.0000 | C10—H10B | 0.9900 |
| C3—C4 | 1.5318 (12) | C11—H11A | 0.9800 |
| C3—H3A | 0.9900 | C11—H11B | 0.9800 |
| C3—H3B | 0.9900 | C11—H11C | 0.9800 |
| C4—C5 | 1.5286 (13) | O1W—H1O1 | 0.833 (19) |
| C4—H4A | 0.9900 | O1W—H2O1 | 0.820 (18) |
| C4—H4B | 0.9900 | O2W—H1O2 | 0.84 (2) |
| C5—C6 | 1.5262 (12) | O2W—H2O2 | 0.73 (4) |
| C5—H5A | 0.9900 | O2W—H3O2 | 0.78 (4) |
| C5—H5B | 0.9900 | ||
| C2—N1—C1 | 114.20 (6) | C5—C6—H6A | 109.2 |
| C2—N1—H1N1 | 109.7 (8) | C7—C6—H6A | 109.2 |
| C1—N1—H1N1 | 110.2 (8) | C5—C6—H6B | 109.2 |
| C2—N1—H2N1 | 108.8 (8) | C7—C6—H6B | 109.2 |
| C1—N1—H2N1 | 108.5 (8) | H6A—C6—H6B | 107.9 |
| H1N1—N1—H2N1 | 105.0 (11) | N2—C7—C2 | 109.85 (6) |
| C7—N2—C8 | 113.56 (6) | N2—C7—C6 | 113.46 (7) |
| C7—N2—H1N2 | 106.2 (8) | C2—C7—C6 | 108.08 (7) |
| C8—N2—H1N2 | 109.4 (8) | N2—C7—H7 | 108.4 |
| N1—C1—C9i | 111.44 (7) | C2—C7—H7 | 108.4 |
| N1—C1—H1A | 109.3 | C6—C7—H7 | 108.4 |
| C9i—C1—H1A | 109.3 | N2—C8—C10 | 110.24 (6) |
| N1—C1—H1B | 109.3 | N2—C8—C9 | 108.72 (6) |
| C9i—C1—H1B | 109.3 | C10—C8—C9 | 113.61 (7) |
| H1A—C1—H1B | 108.0 | N2—C8—H8 | 108.0 |
| N1—C2—C3 | 111.46 (7) | C10—C8—H8 | 108.0 |
| N1—C2—C7 | 108.91 (7) | C9—C8—H8 | 108.0 |
| C3—C2—C7 | 110.83 (7) | C1i—C9—C8 | 115.61 (7) |
| N1—C2—H2 | 108.5 | C1i—C9—H9A | 108.4 |
| C3—C2—H2 | 108.5 | C8—C9—H9A | 108.4 |
| C7—C2—H2 | 108.5 | C1i—C9—H9B | 108.4 |
| C2—C3—C4 | 109.63 (7) | C8—C9—H9B | 108.4 |
| C2—C3—H3A | 109.7 | H9A—C9—H9B | 107.4 |
| C4—C3—H3A | 109.7 | C11—C10—C8 | 113.10 (7) |
| C2—C3—H3B | 109.7 | C11—C10—H10A | 109.0 |
| C4—C3—H3B | 109.7 | C8—C10—H10A | 109.0 |
| H3A—C3—H3B | 108.2 | C11—C10—H10B | 109.0 |
| C5—C4—C3 | 111.30 (7) | C8—C10—H10B | 109.0 |
| C5—C4—H4A | 109.4 | H10A—C10—H10B | 107.8 |
| C3—C4—H4A | 109.4 | C10—C11—H11A | 109.5 |
| C5—C4—H4B | 109.4 | C10—C11—H11B | 109.5 |
| C3—C4—H4B | 109.4 | H11A—C11—H11B | 109.5 |
| H4A—C4—H4B | 108.0 | C10—C11—H11C | 109.5 |
| C6—C5—C4 | 110.83 (7) | H11A—C11—H11C | 109.5 |
| C6—C5—H5A | 109.5 | H11B—C11—H11C | 109.5 |
| C4—C5—H5A | 109.5 | H1O1—O1W—H2O1 | 106.6 (16) |
| C6—C5—H5B | 109.5 | H1O2—O2W—H2O2 | 111 (4) |
| C4—C5—H5B | 109.5 | H1O2—O2W—H3O2 | 108 (3) |
| H5A—C5—H5B | 108.1 | H2O2—O2W—H3O2 | 124 (5) |
| C5—C6—C7 | 112.06 (7) | ||
| C2—N1—C1—C9i | 162.93 (7) | C3—C2—C7—N2 | 175.38 (6) |
| C1—N1—C2—C3 | 62.08 (9) | N1—C2—C7—C6 | 176.69 (7) |
| C1—N1—C2—C7 | −175.33 (6) | C3—C2—C7—C6 | −60.34 (9) |
| N1—C2—C3—C4 | −178.28 (7) | C5—C6—C7—N2 | −179.94 (7) |
| C7—C2—C3—C4 | 60.24 (9) | C5—C6—C7—C2 | 57.97 (9) |
| C2—C3—C4—C5 | −56.36 (10) | C7—N2—C8—C10 | 73.59 (8) |
| C3—C4—C5—C6 | 54.06 (11) | C7—N2—C8—C9 | −161.26 (6) |
| C4—C5—C6—C7 | −55.52 (11) | N2—C8—C9—C1i | −75.02 (9) |
| C8—N2—C7—C2 | −167.13 (6) | C10—C8—C9—C1i | 48.13 (9) |
| C8—N2—C7—C6 | 71.78 (9) | N2—C8—C10—C11 | −175.53 (7) |
| N1—C2—C7—N2 | 52.42 (8) | C9—C8—C10—C11 | 62.15 (9) |
| H··· | ||||
| N1—H1 | 0.909 (13) | 2.182 (14) | 3.0900 (9) | 177.3 (12) |
| N1—H2 | 0.907 (13) | 2.200 (13) | 2.9348 (11) | 137.6 (10) |
| N2—H1 | 0.887 (13) | 2.262 (13) | 3.1242 (12) | 164.1 (11) |
| O1 | 0.833 (19) | 2.400 (19) | 3.2329 (14) | 178.6 (17) |
| O1 | 0.820 (18) | 2.335 (18) | 3.1479 (10) | 171.1 (15) |
| O2 | 0.84 (2) | 2.06 (2) | 2.9021 (15) | 178.1 (18) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.909 (13) | 2.182 (14) | 3.0900 (9) | 177.3 (12) |
| N1—H2 | 0.907 (13) | 2.200 (13) | 2.9348 (11) | 137.6 (10) |
| N2—H1 | 0.887 (13) | 2.262 (13) | 3.1242 (12) | 164.1 (11) |
| O1 | 0.833 (19) | 2.400 (19) | 3.2329 (14) | 178.6 (17) |
| O1 | 0.820 (18) | 2.335 (18) | 3.1479 (10) | 171.1 (15) |
| O2 | 0.84 (2) | 2.06 (2) | 2.9021 (15) | 178.1 (18) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .