| Literature DB >> 24454032 |
B Saravanan1, A Jayamani2, N Sengottuvelan2, G Chakkaravarthi3, V Manivannan1.
Abstract
In the title binuclear copper(II) complex, [Cu2(ClO4)2(OH)2(C10H8N2)2], the Cu(II) ion is coordinated in the form of a Jahn-Teller distorted octahedron by two bi-pyridine N atoms, two perchlorate O atoms and two hydroxide O atoms, and displays a distorted octa-hedral geometry. The mol-ecule belongs to the symmetry point group C 2h . The Cu(II) ion is located on a twofold rotation axis and the hydroxide and perchlorate ligands are located on a mirror plane. Within the dinuclear mol-ecule, the Cu⋯Cu separation is 2.8614 (7) Å. The crystal structure exhibits O-H⋯O, C-H⋯O and π-π [centroid-centroid distance = 3.5374 (13) Å] inter-actions.Entities:
Year: 2013 PMID: 24454032 PMCID: PMC3884256 DOI: 10.1107/S1600536813027852
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu2(ClO4)2(OH)2(C10H8N2)2] | |
| Monoclinic, | Mo |
| Hall symbol: -C 2y | Cell parameters from 4012 reflections |
| θ = 3.2–28.3° | |
| µ = 2.08 mm−1 | |
| β = 113.587 (3)° | Block, colourless |
| 0.24 × 0.20 × 0.18 mm | |
| Bruker Kappa APEXII diffractometer | 1516 independent reflections |
| Radiation source: fine-focus sealed tube | 1330 reflections with |
| Graphite monochromator | |
| ω and φ scans | θmax = 28.3°, θmin = 3.3° |
| Absorption correction: multi-scan ( | |
| 4520 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1516 reflections | (Δ/σ)max < 0.001 |
| 95 parameters | Δρmax = 0.44 e Å−3 |
| 1 restraint | Δρmin = −0.31 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| C1 | −0.96779 (13) | −0.27374 (12) | −0.3726 (3) | 0.0316 (4) | |
| C2 | −0.93192 (16) | −0.34870 (14) | −0.2418 (3) | 0.0415 (4) | |
| H2 | −0.9468 | −0.4039 | −0.3115 | 0.050* | |
| C3 | −0.87311 (17) | −0.34058 (17) | −0.0041 (4) | 0.0481 (5) | |
| H3 | −0.8474 | −0.3903 | 0.0877 | 0.058* | |
| C4 | −0.85328 (16) | −0.25859 (17) | 0.0941 (4) | 0.0469 (5) | |
| H4 | −0.8151 | −0.2520 | 0.2536 | 0.056* | |
| C5 | −0.89063 (16) | −0.18601 (16) | −0.0462 (3) | 0.0429 (5) | |
| H5 | −0.8767 | −0.1303 | 0.0207 | 0.052* | |
| N1 | −0.94650 (12) | −0.19315 (11) | −0.2767 (2) | 0.0331 (3) | |
| O1 | −0.95484 (16) | 0.0000 | −0.2803 (3) | 0.0416 (5) | |
| O2 | −0.75740 (19) | 0.0000 | −0.7997 (4) | 0.0547 (6) | |
| O3 | −0.79963 (14) | −0.07747 (11) | −0.5234 (3) | 0.0566 (4) | |
| O4 | −0.63781 (17) | 0.0000 | −0.4095 (4) | 0.0584 (6) | |
| Cl1 | −0.74892 (5) | 0.0000 | −0.56343 (11) | 0.03846 (17) | |
| Cu1 | −1.0000 | −0.09408 (2) | −0.5000 | 0.03551 (13) | |
| H1 | −0.8987 (16) | 0.0000 | −0.167 (4) | 0.053* |
| C1 | 0.0339 (8) | 0.0310 (9) | 0.0312 (9) | −0.0004 (7) | 0.0143 (7) | 0.0011 (7) |
| C2 | 0.0480 (11) | 0.0352 (10) | 0.0402 (10) | 0.0028 (8) | 0.0163 (9) | 0.0054 (8) |
| C3 | 0.0491 (11) | 0.0519 (14) | 0.0398 (11) | 0.0063 (10) | 0.0139 (9) | 0.0167 (10) |
| C4 | 0.0411 (10) | 0.0649 (15) | 0.0299 (9) | −0.0013 (10) | 0.0093 (8) | 0.0043 (10) |
| C5 | 0.0442 (10) | 0.0481 (12) | 0.0330 (9) | −0.0068 (9) | 0.0118 (8) | −0.0047 (9) |
| N1 | 0.0373 (7) | 0.0311 (8) | 0.0297 (7) | −0.0038 (6) | 0.0122 (6) | −0.0013 (6) |
| O1 | 0.0478 (11) | 0.0305 (10) | 0.0335 (10) | 0.000 | 0.0027 (8) | 0.000 |
| O2 | 0.0678 (14) | 0.0552 (14) | 0.0335 (11) | 0.000 | 0.0123 (10) | 0.000 |
| O3 | 0.0610 (10) | 0.0435 (9) | 0.0628 (11) | −0.0040 (7) | 0.0223 (8) | 0.0070 (8) |
| O4 | 0.0420 (11) | 0.0687 (16) | 0.0470 (13) | 0.000 | −0.0004 (10) | 0.000 |
| Cl1 | 0.0394 (3) | 0.0367 (3) | 0.0315 (3) | 0.000 | 0.0061 (3) | 0.000 |
| Cu1 | 0.0431 (2) | 0.02606 (18) | 0.0349 (2) | 0.000 | 0.01302 (14) | 0.000 |
| C1—N1 | 1.345 (2) | N1—Cu1 | 1.9865 (16) |
| C1—C2 | 1.375 (3) | O1—Cu1 | 1.9097 (13) |
| C1—C1i | 1.484 (3) | O1—Cu1ii | 1.9097 (13) |
| C2—C3 | 1.388 (3) | O1—H1 | 0.807 (10) |
| C2—H2 | 0.9300 | O2—Cl1 | 1.440 (2) |
| C3—C4 | 1.369 (4) | O3—Cl1 | 1.4372 (17) |
| C3—H3 | 0.9300 | O4—Cl1 | 1.431 (2) |
| C4—C5 | 1.376 (3) | Cl1—O3iii | 1.4372 (17) |
| C4—H4 | 0.9300 | Cu1—O1ii | 1.9097 (13) |
| C5—N1 | 1.342 (2) | Cu1—N1i | 1.9865 (16) |
| C5—H5 | 0.9300 | Cu1—Cu1ii | 2.8614 (7) |
| N1—C1—C2 | 121.81 (16) | Cu1—O1—H1 | 123.4 (12) |
| N1—C1—C1i | 114.25 (10) | Cu1ii—O1—H1 | 123.4 (12) |
| C2—C1—C1i | 123.94 (11) | O4—Cl1—O3 | 109.45 (9) |
| C1—C2—C3 | 118.8 (2) | O4—Cl1—O3iii | 109.45 (9) |
| C1—C2—H2 | 120.6 | O3—Cl1—O3iii | 110.11 (15) |
| C3—C2—H2 | 120.6 | O4—Cl1—O2 | 108.83 (15) |
| C4—C3—C2 | 119.3 (2) | O3—Cl1—O2 | 109.49 (9) |
| C4—C3—H3 | 120.3 | O3iii—Cl1—O2 | 109.49 (9) |
| C2—C3—H3 | 120.3 | O1—Cu1—O1ii | 82.97 (9) |
| C3—C4—C5 | 119.13 (19) | O1—Cu1—N1i | 176.89 (8) |
| C3—C4—H4 | 120.4 | O1ii—Cu1—N1i | 97.91 (6) |
| C5—C4—H4 | 120.4 | O1—Cu1—N1 | 97.91 (6) |
| N1—C5—C4 | 122.0 (2) | O1ii—Cu1—N1 | 176.89 (7) |
| N1—C5—H5 | 119.0 | N1i—Cu1—N1 | 81.37 (9) |
| C4—C5—H5 | 119.0 | O1—Cu1—Cu1ii | 41.48 (4) |
| C5—N1—C1 | 118.93 (17) | O1ii—Cu1—Cu1ii | 41.48 (4) |
| C5—N1—Cu1 | 126.04 (15) | N1i—Cu1—Cu1ii | 139.32 (4) |
| C1—N1—Cu1 | 115.01 (11) | N1—Cu1—Cu1ii | 139.32 (4) |
| Cu1—O1—Cu1ii | 97.03 (9) | ||
| N1—C1—C2—C3 | 0.7 (3) | C1i—C1—N1—Cu1 | −2.8 (2) |
| C1i—C1—C2—C3 | −179.4 (2) | Cu1ii—O1—Cu1—O1ii | 0.0 |
| C1—C2—C3—C4 | 0.6 (3) | Cu1ii—O1—Cu1—N1 | 176.99 (7) |
| C2—C3—C4—C5 | −1.1 (3) | C5—N1—Cu1—O1 | −3.53 (17) |
| C3—C4—C5—N1 | 0.4 (3) | C1—N1—Cu1—O1 | 178.01 (13) |
| C4—C5—N1—C1 | 0.9 (3) | C5—N1—Cu1—N1i | 179.53 (19) |
| C4—C5—N1—Cu1 | −177.48 (15) | C1—N1—Cu1—N1i | 1.07 (9) |
| C2—C1—N1—C5 | −1.4 (3) | C5—N1—Cu1—Cu1ii | −0.47 (19) |
| C1i—C1—N1—C5 | 178.60 (18) | C1—N1—Cu1—Cu1ii | −178.93 (9) |
| C2—C1—N1—Cu1 | 177.14 (14) |
| H··· | ||||
| O1—H1···O2iv | 0.81 (2) | 2.34 (1) | 3.134 (3) | 169 (4) |
| C5—H5···O2iv | 0.93 | 2.52 | 3.381 (3) | 153 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1⋯O2i | 0.81 (2) | 2.34 (1) | 3.134 (3) | 169 (4) |
| C5—H5⋯O2i | 0.93 | 2.52 | 3.381 (3) | 153 |
Symmetry code: (i) .