| Literature DB >> 22904728 |
M Mobin Shaikh1, Veenu Mishra, Priti Ram, Anil Birla.
Abstract
The structure of the centrosymmetric title complex, [Cu(C(5)H(9)O(2))(2)(C(6)H(7)NO)(2)], has the Cu(II) atom on a centre of inversion. The Cu(II) atom is six-coordinate with a distorted octa-hedral geometry, defined by the N and O atoms of the chelating 2-(2-hydroxymethyl)pyridine ligands and two carboxyl-ate O atoms from two monodentate pivalate ions. The crystal packing is stabilized by inter-molecular C-H⋯O and intra-molecular O-H⋯O hydrogen-bond inter-actions.Entities:
Year: 2012 PMID: 22904728 PMCID: PMC3414121 DOI: 10.1107/S1600536812030917
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu(C5H9O2)2(C6H7NO)2] | |
| Monoclinic, | Cu |
| Hall symbol: -P 2yn | Cell parameters from 3855 reflections |
| θ = 3.2–71.6° | |
| µ = 1.63 mm−1 | |
| β = 91.907 (5)° | Block, blue |
| 0.33 × 0.28 × 0.23 mm | |
| Oxford Super Nova diffractometer | 2282 independent reflections |
| Radiation source: Micro-Focus (Cu) X-ray Source | 2052 reflections with |
| Graphite monochromator | |
| Detector resolution: 15.9948 pixels mm-1 | θmax = 71.8°, θmin = 5.5° |
| ω/θ scans | |
| Absorption correction: multi-scan ( | |
| 6929 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2282 reflections | (Δ/σ)max < 0.001 |
| 146 parameters | Δρmax = 0.43 e Å−3 |
| 0 restraints | Δρmin = −0.54 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cu1 | 0.5000 | 0.0000 | 0.5000 | 0.02121 (17) | |
| O1 | 0.52417 (16) | −0.22601 (17) | 0.40801 (10) | 0.0281 (3) | |
| O2 | 0.31138 (15) | −0.04928 (18) | 0.54027 (11) | 0.0284 (3) | |
| O3 | 0.28735 (16) | −0.28213 (18) | 0.47823 (11) | 0.0323 (4) | |
| N1 | 0.57203 (17) | −0.14564 (18) | 0.59959 (12) | 0.0231 (4) | |
| C1 | 0.5683 (2) | −0.1127 (2) | 0.69555 (15) | 0.0266 (4) | |
| H1 | 0.5305 | −0.0185 | 0.7147 | 0.032* | |
| C2 | 0.6170 (2) | −0.2102 (3) | 0.76689 (16) | 0.0315 (5) | |
| H2 | 0.6142 | −0.1836 | 0.8341 | 0.038* | |
| C3 | 0.6701 (2) | −0.3477 (3) | 0.73850 (18) | 0.0347 (5) | |
| H3 | 0.7055 | −0.4168 | 0.7861 | 0.042* | |
| C4 | 0.6712 (2) | −0.3839 (3) | 0.63980 (18) | 0.0325 (5) | |
| H4 | 0.7049 | −0.4792 | 0.6192 | 0.039* | |
| C5 | 0.6222 (2) | −0.2788 (2) | 0.57143 (15) | 0.0251 (4) | |
| C6 | 0.6241 (2) | −0.3092 (3) | 0.46280 (17) | 0.0323 (5) | |
| H6A | 0.7156 | −0.2834 | 0.4390 | 0.039* | |
| H6B | 0.6090 | −0.4186 | 0.4512 | 0.039* | |
| C7 | 0.2550 (2) | −0.1780 (2) | 0.53540 (13) | 0.0227 (4) | |
| C8 | 0.1446 (2) | −0.2117 (3) | 0.60946 (15) | 0.0280 (5) | |
| C9 | 0.2209 (3) | −0.2819 (4) | 0.6974 (2) | 0.0605 (9) | |
| H9A | 0.2864 | −0.2085 | 0.7251 | 0.091* | |
| H9B | 0.2696 | −0.3726 | 0.6765 | 0.091* | |
| H9C | 0.1555 | −0.3097 | 0.7470 | 0.091* | |
| C10 | 0.0713 (3) | −0.0693 (4) | 0.6412 (2) | 0.0593 (8) | |
| H10A | 0.1382 | 0.0035 | 0.6680 | 0.089* | |
| H10B | 0.0061 | −0.0950 | 0.6914 | 0.089* | |
| H10C | 0.0223 | −0.0244 | 0.5847 | 0.089* | |
| C11 | 0.0425 (3) | −0.3258 (4) | 0.5677 (2) | 0.0659 (10) | |
| H11A | 0.0909 | −0.4175 | 0.5480 | 0.099* | |
| H11B | −0.0059 | −0.2819 | 0.5105 | 0.099* | |
| H11C | −0.0233 | −0.3516 | 0.6174 | 0.099* | |
| H101 | 0.434 (4) | −0.251 (4) | 0.428 (2) | 0.053 (9)* |
| Cu1 | 0.0266 (3) | 0.0185 (3) | 0.0187 (3) | −0.00076 (14) | 0.00306 (17) | 0.00341 (14) |
| O1 | 0.0340 (8) | 0.0301 (8) | 0.0206 (7) | 0.0000 (6) | 0.0055 (6) | −0.0007 (6) |
| O2 | 0.0301 (8) | 0.0233 (8) | 0.0323 (8) | −0.0012 (6) | 0.0069 (6) | 0.0034 (6) |
| O3 | 0.0342 (8) | 0.0389 (9) | 0.0242 (7) | −0.0084 (6) | 0.0074 (6) | −0.0125 (6) |
| N1 | 0.0272 (8) | 0.0205 (8) | 0.0219 (8) | −0.0017 (6) | 0.0033 (6) | 0.0019 (6) |
| C1 | 0.0305 (10) | 0.0265 (10) | 0.0229 (10) | −0.0038 (8) | 0.0003 (8) | −0.0007 (8) |
| C2 | 0.0338 (11) | 0.0375 (12) | 0.0229 (10) | −0.0062 (9) | −0.0033 (8) | 0.0053 (9) |
| C3 | 0.0305 (11) | 0.0359 (12) | 0.0371 (12) | −0.0027 (9) | −0.0050 (9) | 0.0155 (10) |
| C4 | 0.0310 (11) | 0.0247 (11) | 0.0419 (13) | 0.0032 (8) | 0.0010 (9) | 0.0074 (9) |
| C5 | 0.0255 (10) | 0.0219 (10) | 0.0282 (11) | −0.0009 (8) | 0.0032 (8) | 0.0024 (8) |
| C6 | 0.0370 (12) | 0.0304 (11) | 0.0298 (11) | 0.0056 (9) | 0.0068 (9) | −0.0018 (9) |
| C7 | 0.0260 (10) | 0.0271 (10) | 0.0148 (9) | −0.0013 (8) | −0.0011 (7) | 0.0008 (7) |
| C8 | 0.0300 (11) | 0.0317 (11) | 0.0228 (10) | −0.0058 (8) | 0.0069 (8) | −0.0031 (8) |
| C9 | 0.0534 (18) | 0.096 (2) | 0.0332 (14) | 0.0017 (16) | 0.0136 (12) | 0.0251 (15) |
| C10 | 0.0640 (19) | 0.0502 (18) | 0.066 (2) | 0.0039 (14) | 0.0370 (16) | −0.0086 (15) |
| C11 | 0.0546 (18) | 0.088 (2) | 0.0568 (18) | −0.0427 (17) | 0.0249 (15) | −0.0278 (17) |
| Cu1—N1 | 1.9855 (17) | C4—H4 | 0.9500 |
| Cu1—N1i | 1.9855 (17) | C5—C6 | 1.510 (3) |
| Cu1—O2 | 1.9937 (17) | C6—H6A | 0.9900 |
| Cu1—O2i | 1.9937 (17) | C6—H6B | 0.9900 |
| Cu1—O1i | 2.3748 (18) | C7—O3 | 1.254 (3) |
| Cu1—O1 | 2.3748 (18) | C7—C8 | 1.535 (3) |
| O1—C6 | 1.418 (3) | C8—C11 | 1.518 (3) |
| O1—H101 | 0.95 (4) | C8—C10 | 1.518 (4) |
| O2—C7 | 1.265 (3) | C8—C9 | 1.526 (4) |
| O3—C7 | 1.254 (3) | C9—H9A | 0.9800 |
| N1—C5 | 1.336 (3) | C9—H9B | 0.9800 |
| N1—C1 | 1.346 (3) | C9—H9C | 0.9800 |
| C1—C2 | 1.375 (3) | C10—H10A | 0.9800 |
| C1—H1 | 0.9500 | C10—H10B | 0.9800 |
| C2—C3 | 1.382 (4) | C10—H10C | 0.9800 |
| C2—H2 | 0.9500 | C11—H11A | 0.9800 |
| C3—C4 | 1.387 (4) | C11—H11B | 0.9800 |
| C3—H3 | 0.9500 | C11—H11C | 0.9800 |
| C4—C5 | 1.391 (3) | ||
| N1—Cu1—N1i | 180.00 (7) | C4—C5—C6 | 121.8 (2) |
| N1—Cu1—O2 | 88.90 (7) | O1—C6—C5 | 113.40 (18) |
| N1i—Cu1—O2 | 91.10 (7) | O1—C6—H6A | 108.9 |
| N1—Cu1—O2i | 91.10 (7) | C5—C6—H6A | 108.9 |
| N1i—Cu1—O2i | 88.90 (7) | O1—C6—H6B | 108.9 |
| O2—Cu1—O2i | 180.0 | C5—C6—H6B | 108.9 |
| N1—Cu1—O1i | 102.73 (7) | H6A—C6—H6B | 107.7 |
| N1i—Cu1—O1i | 77.27 (7) | O3—C7—O2 | 124.95 (19) |
| O2—Cu1—O1i | 85.84 (6) | O3—C7—O2 | 124.95 (19) |
| O2i—Cu1—O1i | 94.16 (6) | O3—C7—C8 | 117.88 (18) |
| N1—Cu1—O1 | 77.27 (7) | O3—C7—C8 | 117.88 (18) |
| N1i—Cu1—O1 | 102.73 (7) | O2—C7—C8 | 117.07 (17) |
| O2—Cu1—O1 | 94.16 (6) | C11—C8—C10 | 110.2 (2) |
| O2i—Cu1—O1 | 85.84 (6) | C11—C8—C9 | 109.0 (3) |
| O1i—Cu1—O1 | 180.0 | C10—C8—C9 | 109.6 (2) |
| C6—O1—Cu1 | 103.56 (12) | C11—C8—C7 | 110.48 (18) |
| C6—O1—H101 | 111 (2) | C10—C8—C7 | 112.25 (19) |
| Cu1—O1—H101 | 86.1 (19) | C9—C8—C7 | 105.14 (19) |
| C7—O2—Cu1 | 126.06 (13) | C8—C9—H9A | 109.5 |
| C5—N1—C1 | 119.59 (18) | C8—C9—H9B | 109.5 |
| C5—N1—Cu1 | 119.87 (14) | H9A—C9—H9B | 109.5 |
| C1—N1—Cu1 | 120.52 (14) | C8—C9—H9C | 109.5 |
| N1—C1—C2 | 122.4 (2) | H9A—C9—H9C | 109.5 |
| N1—C1—H1 | 118.8 | H9B—C9—H9C | 109.5 |
| C2—C1—H1 | 118.8 | C8—C10—H10A | 109.5 |
| C1—C2—C3 | 118.4 (2) | C8—C10—H10B | 109.5 |
| C1—C2—H2 | 120.8 | H10A—C10—H10B | 109.5 |
| C3—C2—H2 | 120.8 | C8—C10—H10C | 109.5 |
| C2—C3—C4 | 119.4 (2) | H10A—C10—H10C | 109.5 |
| C2—C3—H3 | 120.3 | H10B—C10—H10C | 109.5 |
| C4—C3—H3 | 120.3 | C8—C11—H11A | 109.5 |
| C3—C4—C5 | 119.1 (2) | C8—C11—H11B | 109.5 |
| C3—C4—H4 | 120.4 | H11A—C11—H11B | 109.5 |
| C5—C4—H4 | 120.4 | C8—C11—H11C | 109.5 |
| N1—C5—C4 | 121.0 (2) | H11A—C11—H11C | 109.5 |
| N1—C5—C6 | 117.14 (18) | H11B—C11—H11C | 109.5 |
| N1—Cu1—O1—C6 | −23.50 (13) | Cu1—N1—C5—C4 | −178.92 (16) |
| N1i—Cu1—O1—C6 | 156.50 (13) | C1—N1—C5—C6 | −179.83 (19) |
| O2—Cu1—O1—C6 | −111.43 (13) | Cu1—N1—C5—C6 | 1.5 (2) |
| O2i—Cu1—O1—C6 | 68.57 (13) | C3—C4—C5—N1 | −1.3 (3) |
| N1—Cu1—O2—C7 | −61.13 (16) | C3—C4—C5—C6 | 178.2 (2) |
| N1i—Cu1—O2—C7 | 118.87 (16) | Cu1—O1—C6—C5 | 30.6 (2) |
| O1i—Cu1—O2—C7 | −163.98 (16) | N1—C5—C6—O1 | −25.3 (3) |
| O1—Cu1—O2—C7 | 16.02 (16) | C4—C5—C6—O1 | 155.2 (2) |
| O2—Cu1—N1—C5 | 106.78 (16) | O3—O3—C7—O2 | 0.00 (19) |
| O2i—Cu1—N1—C5 | −73.22 (16) | O3—O3—C7—C8 | 0.00 (10) |
| O1i—Cu1—N1—C5 | −167.74 (15) | Cu1—O2—C7—O3 | −24.1 (3) |
| O1—Cu1—N1—C5 | 12.26 (15) | Cu1—O2—C7—O3 | −24.1 (3) |
| O2—Cu1—N1—C1 | −71.87 (16) | Cu1—O2—C7—C8 | 152.14 (14) |
| O2i—Cu1—N1—C1 | 108.13 (16) | O3—C7—C8—C11 | −31.3 (3) |
| O1i—Cu1—N1—C1 | 13.62 (16) | O3—C7—C8—C11 | −31.3 (3) |
| O1—Cu1—N1—C1 | −166.38 (16) | O2—C7—C8—C11 | 152.3 (2) |
| C5—N1—C1—C2 | 1.4 (3) | O3—C7—C8—C10 | −154.7 (2) |
| Cu1—N1—C1—C2 | −179.99 (16) | O3—C7—C8—C10 | −154.7 (2) |
| N1—C1—C2—C3 | −0.8 (3) | O2—C7—C8—C10 | 28.8 (3) |
| C1—C2—C3—C4 | −0.8 (3) | O3—C7—C8—C9 | 86.3 (2) |
| C2—C3—C4—C5 | 1.8 (3) | O3—C7—C8—C9 | 86.3 (2) |
| C1—N1—C5—C4 | −0.3 (3) | O2—C7—C8—C9 | −90.2 (3) |
| H··· | ||||
| O1—H101···O3 | 0.95 (4) | 1.64 (4) | 2.588 (2) | 171 (3) |
| C2—H2···O3ii | 0.95 | 2.57 | 3.289 (3) | 132 |
| C4—H4···O3iii | 0.95 | 2.50 | 3.392 (3) | 157 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H101⋯O3 | 0.95 (4) | 1.64 (4) | 2.588 (2) | 171 (3) |
| C2—H2⋯O3i | 0.95 | 2.57 | 3.289 (3) | 132 |
| C4—H4⋯O3ii | 0.95 | 2.50 | 3.392 (3) | 157 |
Symmetry codes: (i) ; (ii) .