| Literature DB >> 24454013 |
Abstract
In the crystal structure of Na2SeO3·5H2O [disodium selen-ate(IV) penta-hydrate], two Se, two selenite O atoms and one water O atom are located on a mirror plane, and one water O atom is located on a twofold rotation axis. The coordination of one Na(+) cation is distorted trigonal bipyramidal, formed by three equatorial H2O ligands and two axial selenite O atoms. The other Na(+) cation has an octa-hedral coordination by six water mol-ecules. The two independent SeO3 groups form almost undistorted trigonal pyramids, with Se-O bond lengths in the range 1.6856 (7)-1.7202 (10) Å and O-Se-O angles in the range 101.98 (3)-103.11 (5)°, and both are μ2-O:O-bonded to a pair of Na(+) cations. Hydrogen bonds involving all water molecules and selenite O atoms consolidate the crystal packing. Although anhydrous Na2SeO3 and Na2TeO3 are isotypic, the title compound is surprisingly not isotypic with Na2TeO3·5H2O. In the tellurite hydrate, all Na(+) cations have an octa-hedral coordination and the TeO3 groups are bonded to Na(+) only via one of their three O atoms.Entities:
Year: 2013 PMID: 24454013 PMCID: PMC3884237 DOI: 10.1107/S1600536813028602
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| Na2SeO3·5H2O | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2c 2b | Cell parameters from 7917 reflections |
| θ = 2.4–30.0° | |
| µ = 4.58 mm−1 | |
| Prism, colourless | |
| 0.35 × 0.21 × 0.14 mm |
| Bruker SMART CCD diffractometer | 2529 independent reflections |
| Radiation source: fine-focus sealed tube | 2435 reflections with |
| Graphite monochromator | |
| ω and φ scans | θmax = 30.0°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 23979 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| All H-atom parameters refined | |
| 2529 reflections | (Δ/σ)max = 0.003 |
| 150 parameters | Δρmax = 0.64 e Å−3 |
| 70 restraints | Δρmin = −0.58 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Na1 | 0.51942 (7) | 0.40815 (3) | 0.62757 (3) | 0.01543 (9) | |
| Na2 | 0.00865 (7) | 0.34328 (2) | 0.49775 (3) | 0.01121 (8) | |
| Se1 | 0.36729 (2) | 0.233898 (8) | 0.7500 | 0.00946 (4) | |
| O1 | 0.13882 (15) | 0.28182 (7) | 0.7500 | 0.01128 (19) | |
| O2 | 0.48606 (11) | 0.27444 (4) | 0.66069 (5) | 0.01294 (14) | |
| Se2 | 0.30596 (2) | 0.578291 (8) | 0.7500 | 0.00853 (4) | |
| O3 | 0.08542 (15) | 0.52480 (6) | 0.7500 | 0.01135 (19) | |
| O4 | 0.43189 (11) | 0.54110 (4) | 0.66066 (5) | 0.01209 (14) | |
| O5W | 0.7537 (2) | 0.41001 (7) | 0.7500 | 0.0182 (2) | |
| H5A | 0.840 (3) | 0.4453 (11) | 0.7500 | 0.051 (9)* | |
| H5B | 0.821 (4) | 0.3692 (10) | 0.7500 | 0.112 (17)* | |
| O6W | 0.16164 (12) | 0.40116 (4) | 0.62475 (6) | 0.01327 (15) | |
| H6A | 0.149 (3) | 0.3651 (7) | 0.6612 (9) | 0.030 (5)* | |
| H6B | 0.142 (3) | 0.4410 (6) | 0.6550 (10) | 0.038 (5)* | |
| O7W | 0.73311 (12) | 0.43467 (5) | 0.50608 (5) | 0.01336 (14) | |
| H7A | 0.682 (2) | 0.4442 (10) | 0.4557 (8) | 0.030 (4)* | |
| H7B | 0.783 (2) | 0.4762 (7) | 0.5234 (10) | 0.030 (4)* | |
| O8W | 0.27783 (17) | 0.2500 | 0.5000 | 0.0132 (2) | |
| H8AB | 0.3565 (17) | 0.2526 (12) | 0.5444 (5) | 0.035 (5)* | |
| O9W | −0.12523 (11) | 0.24467 (5) | 0.60772 (6) | 0.01310 (15) | |
| H9A | −0.053 (2) | 0.2498 (10) | 0.6531 (9) | 0.030 (5)* | |
| H9B | −0.2434 (15) | 0.2472 (11) | 0.6262 (11) | 0.035 (5)* | |
| O10W | 0.17400 (12) | 0.42733 (5) | 0.39277 (6) | 0.01412 (15) | |
| H10A | 0.2910 (15) | 0.4283 (10) | 0.3722 (11) | 0.031 (5)* | |
| H10B | 0.099 (2) | 0.4383 (11) | 0.3494 (9) | 0.030 (5)* |
| Na1 | 0.0141 (2) | 0.0175 (2) | 0.0148 (2) | −0.00088 (16) | 0.00163 (16) | 0.00129 (16) |
| Na2 | 0.01154 (18) | 0.01093 (18) | 0.01114 (19) | 0.00028 (14) | −0.00033 (14) | −0.00044 (14) |
| Se1 | 0.00905 (7) | 0.01022 (7) | 0.00911 (7) | 0.00145 (4) | 0.000 | 0.000 |
| O1 | 0.0073 (4) | 0.0151 (5) | 0.0114 (5) | 0.0017 (4) | 0.000 | 0.000 |
| O2 | 0.0110 (3) | 0.0179 (4) | 0.0099 (3) | 0.0010 (3) | 0.0022 (3) | 0.0016 (3) |
| Se2 | 0.00845 (7) | 0.00848 (7) | 0.00867 (7) | −0.00085 (4) | 0.000 | 0.000 |
| O3 | 0.0080 (4) | 0.0127 (5) | 0.0133 (5) | −0.0022 (4) | 0.000 | 0.000 |
| O4 | 0.0111 (3) | 0.0150 (3) | 0.0101 (3) | −0.0005 (3) | 0.0018 (3) | −0.0014 (3) |
| O5W | 0.0184 (5) | 0.0175 (6) | 0.0186 (6) | −0.0028 (5) | 0.000 | 0.000 |
| O6W | 0.0166 (4) | 0.0106 (4) | 0.0126 (4) | −0.0008 (3) | −0.0011 (3) | −0.0007 (3) |
| O7W | 0.0151 (3) | 0.0140 (3) | 0.0110 (3) | 0.0005 (3) | −0.0004 (3) | 0.0001 (3) |
| O8W | 0.0116 (5) | 0.0181 (5) | 0.0099 (5) | 0.000 | 0.000 | −0.0010 (4) |
| O9W | 0.0092 (3) | 0.0189 (4) | 0.0112 (3) | −0.0001 (3) | 0.0004 (3) | −0.0018 (3) |
| O10W | 0.0108 (3) | 0.0183 (4) | 0.0132 (4) | −0.0008 (3) | 0.0001 (3) | 0.0022 (3) |
| Na1—O7W | 2.3266 (9) | Se2—O3 | 1.7202 (10) |
| Na1—O6W | 2.3600 (9) | O5W—Na1iii | 2.3781 (10) |
| Na1—O2 | 2.3650 (9) | O5W—H5A | 0.831 (10) |
| Na1—O5W | 2.3781 (10) | O5W—H5B | 0.833 (10) |
| Na1—O4 | 2.4119 (9) | O6W—H6A | 0.826 (9) |
| Na2—O9Wi | 2.3458 (9) | O6W—H6B | 0.830 (9) |
| Na2—O6W | 2.3520 (9) | O7W—Na2iv | 2.4057 (9) |
| Na2—O10W | 2.3852 (9) | O7W—H7A | 0.833 (9) |
| Na2—O8W | 2.3930 (9) | O7W—H7B | 0.829 (9) |
| Na2—O7Wii | 2.4056 (9) | O8W—Na2i | 2.3930 (9) |
| Na2—O9W | 2.5108 (9) | O8W—H8AB | 0.837 (8) |
| Se1—O2 | 1.6857 (7) | O9W—Na2i | 2.3457 (9) |
| Se1—O2iii | 1.6857 (7) | O9W—H9A | 0.825 (9) |
| Se1—O1 | 1.7164 (10) | O9W—H9B | 0.826 (9) |
| Se2—O4 | 1.6856 (7) | O10W—H10A | 0.828 (9) |
| Se2—O4iii | 1.6856 (7) | O10W—H10B | 0.829 (9) |
| O7W—Na1—O6W | 126.90 (3) | Na1—O5W—Na1iii | 99.06 (5) |
| O7W—Na1—O2 | 114.03 (3) | Na1—O5W—H5A | 116.9 (10) |
| O6W—Na1—O2 | 82.02 (3) | Na1iii—O5W—H5A | 116.9 (10) |
| O7W—Na1—O5W | 101.06 (4) | Na1—O5W—H5B | 109.6 (13) |
| O6W—Na1—O5W | 131.46 (4) | Na1iii—O5W—H5B | 109.6 (13) |
| O2—Na1—O5W | 85.18 (4) | H5A—O5W—H5B | 104.6 (15) |
| O7W—Na1—O4 | 96.58 (3) | Na2—O6W—Na1 | 117.62 (4) |
| O6W—Na1—O4 | 79.24 (3) | Na2—O6W—H6A | 99.2 (11) |
| O2—Na1—O4 | 149.39 (3) | Na1—O6W—H6A | 97.2 (12) |
| O5W—Na1—O4 | 89.32 (4) | Na2—O6W—H6B | 135.6 (12) |
| O9Wi—Na2—O6W | 164.81 (3) | Na1—O6W—H6B | 95.9 (13) |
| O9Wi—Na2—O10W | 97.56 (3) | H6A—O6W—H6B | 104.8 (12) |
| O6W—Na2—O10W | 93.79 (3) | Na1—O7W—Na2iv | 111.55 (3) |
| O9Wi—Na2—O8W | 81.60 (3) | Na1—O7W—H7A | 119.0 (12) |
| O6W—Na2—O8W | 87.49 (3) | Na2iv—O7W—H7A | 112.8 (12) |
| O10W—Na2—O8W | 94.49 (3) | Na1—O7W—H7B | 99.9 (12) |
| O9Wi—Na2—O7Wii | 99.97 (3) | Na2iv—O7W—H7B | 106.4 (12) |
| O6W—Na2—O7Wii | 90.29 (3) | H7A—O7W—H7B | 105.4 (12) |
| O10W—Na2—O7Wii | 88.88 (3) | H8ABi—O8W—Na2i | 115.7 (11) |
| O8W—Na2—O7Wii | 176.07 (3) | H8ABi—O8W—Na2 | 118.9 (12) |
| O9Wi—Na2—O9W | 82.01 (3) | Na2i—O8W—Na2 | 84.39 (4) |
| O6W—Na2—O9W | 85.46 (3) | H8ABi—O8W—H8AB | 103.5 (14) |
| O10W—Na2—O9W | 172.76 (3) | Na2i—O8W—H8AB | 118.9 (12) |
| O8W—Na2—O9W | 78.28 (3) | Na2—O8W—H8AB | 115.7 (11) |
| O7Wii—Na2—O9W | 98.32 (3) | Na2i—O9W—Na2 | 82.82 (3) |
| O2iii—Se1—O2 | 103.06 (5) | Na2i—O9W—H9A | 113.2 (12) |
| O2iii—Se1—O1 | 101.98 (3) | Na2—O9W—H9A | 104.5 (12) |
| O2—Se1—O1 | 101.98 (3) | Na2i—O9W—H9B | 127.4 (12) |
| Se1—O2—Na1 | 127.49 (4) | Na2—O9W—H9B | 120.6 (13) |
| O4iii—Se2—O4 | 103.11 (5) | H9A—O9W—H9B | 105.5 (12) |
| O4iii—Se2—O3 | 102.24 (3) | Na2—O10W—H10A | 132.5 (12) |
| O4—Se2—O3 | 102.24 (3) | Na2—O10W—H10B | 111.7 (12) |
| Se2—O4—Na1 | 129.59 (4) | H10A—O10W—H10B | 105.2 (12) |
| H··· | ||||
| O5 | 0.83 (1) | 2.12 (1) | 2.9468 (16) | 173 (3) |
| O5 | 0.83 (1) | 2.58 (2) | 3.3631 (17) | 158 (3) |
| O6 | 0.83 (1) | 1.95 (1) | 2.7704 (12) | 176 (2) |
| O6 | 0.83 (1) | 2.05 (1) | 2.8660 (11) | 169 (2) |
| O7 | 0.83 (1) | 1.89 (1) | 2.7252 (11) | 176 (2) |
| O7 | 0.83 (1) | 2.09 (1) | 2.8740 (12) | 157 (2) |
| O8 | 0.84 (1) | 1.96 (1) | 2.7744 (9) | 166 (1) |
| O9 | 0.83 (1) | 1.99 (1) | 2.8027 (11) | 168 (2) |
| O9 | 0.83 (1) | 1.91 (1) | 2.7259 (11) | 168 (2) |
| O10 | 0.83 (1) | 1.96 (1) | 2.7672 (11) | 164 (2) |
| O10 | 0.83 (1) | 2.01 (1) | 2.8374 (11) | 174 (2) |
Selected bond lengths (Å)
| Na1—O7 | 2.3266 (9) |
| Na1—O6 | 2.3600 (9) |
| Na1—O2 | 2.3650 (9) |
| Na1—O5 | 2.3781 (10) |
| Na1—O4 | 2.4119 (9) |
| Na2—O9 | 2.3458 (9) |
| Na2—O6 | 2.3520 (9) |
| Na2—O10 | 2.3852 (9) |
| Na2—O8 | 2.3930 (9) |
| Na2—O7 | 2.4056 (9) |
| Na2—O9 | 2.5108 (9) |
| Se1—O2 | 1.6857 (7) |
| Se1—O2iii | 1.6857 (7) |
| Se1—O1 | 1.7164 (10) |
| Se2—O4 | 1.6856 (7) |
| Se2—O4iii | 1.6856 (7) |
| Se2—O3 | 1.7202 (10) |
Symmetry codes: (i) ; (ii) ; (iii) .
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O5 | 0.83 (1) | 2.12 (1) | 2.9468 (16) | 173 (3) |
| O5 | 0.83 (1) | 2.58 (2) | 3.3631 (17) | 158 (3) |
| O6 | 0.83 (1) | 1.95 (1) | 2.7704 (12) | 176 (2) |
| O6 | 0.83 (1) | 2.05 (1) | 2.8660 (11) | 169 (2) |
| O7 | 0.83 (1) | 1.89 (1) | 2.7252 (11) | 176 (2) |
| O7 | 0.83 (1) | 2.09 (1) | 2.8740 (12) | 157 (2) |
| O8 | 0.84 (1) | 1.96 (1) | 2.7744 (9) | 166 (1) |
| O9 | 0.83 (1) | 1.99 (1) | 2.8027 (11) | 168 (2) |
| O9 | 0.83 (1) | 1.91 (1) | 2.7259 (11) | 168 (2) |
| O10 | 0.83 (1) | 1.96 (1) | 2.7672 (11) | 164 (2) |
| O10 | 0.83 (1) | 2.01 (1) | 2.8374 (11) | 174 (2) |
Symmetry codes: (ii) ; (iv) ; (v) ; (vi) .