Literature DB >> 24453214

Probing large conformational rearrangements in wild-type and mutant spectrin using structural mass spectrometry.

Sira Sriswasdi1, Sandra L Harper, Hsin-Yao Tang, Patrick G Gallagher, David W Speicher.   

Abstract

Conformational changes of macromolecular complexes play key mechanistic roles in many biological processes, but large, highly flexible proteins and protein complexes usually cannot be analyzed by crystallography or NMR. Here, structures and conformational changes of the highly flexible, dynamic red cell spectrin and effects of a common mutation that disrupts red cell membranes were elucidated using chemical cross-linking coupled with mass spectrometry. Interconversion of spectrin between closed dimers, open dimers, and tetramers plays a key role in maintaining red cell shape and membrane integrity, and spectrins in other cell types serve these as well as more diverse functions. Using a minispectrin construct, experimentally verified structures of closed dimers and tetramers were determined by combining distance constraints from zero-length cross-links with molecular models and biophysical data. Subsequent biophysical and structural mass spectrometry characterization of a common hereditary elliptocytosis-related mutation of α-spectrin, L207P, showed that cell membranes were destabilized by a shift of the dimer-tetramer equilibrium toward closed dimers. The structure of αL207P mutant closed dimers provided previously unidentified mechanistic insight into how this mutation, which is located a large distance from the tetramerization site, destabilizes spectrin tetramers and cell membrane integrity.

Entities:  

Keywords:  hereditary hemolytic anemia; protein conformations

Mesh:

Substances:

Year:  2014        PMID: 24453214      PMCID: PMC3918770          DOI: 10.1073/pnas.1317620111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  30 in total

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Review 4.  Chemical cross-linking and mass spectrometry for protein structural modeling.

Authors:  Jaap Willem Back; Luitzen de Jong; Anton O Muijsers; Chris G de Koster
Journal:  J Mol Biol       Date:  2003-08-08       Impact factor: 5.469

5.  Structural insights into the stability and flexibility of unusual erythroid spectrin repeats.

Authors:  Hideki Kusunoki; Ruby I MacDonald; Alfonso Mondragón
Journal:  Structure       Date:  2004-04       Impact factor: 5.006

Review 6.  Hereditary elliptocytosis: spectrin and protein 4.1R.

Authors:  Patrick G Gallagher
Journal:  Semin Hematol       Date:  2004-04       Impact factor: 3.851

Review 7.  Chemical cross-linkers for protein structure studies by mass spectrometry.

Authors:  David Paramelle; Guillaume Miralles; Gilles Subra; Jean Martinez
Journal:  Proteomics       Date:  2013-01-24       Impact factor: 3.984

Review 8.  The membrane skeleton of human erythrocytes and its implications for more complex cells.

Authors:  V Bennett
Journal:  Annu Rev Biochem       Date:  1985       Impact factor: 23.643

9.  Mutant forms of spectrin alpha-subunits in hereditary elliptocytosis.

Authors:  S L Marchesi; J T Letsinger; D W Speicher; V T Marchesi; P Agre; B Hyun; G Gulati
Journal:  J Clin Invest       Date:  1987-07       Impact factor: 14.808

10.  Abnormal spectrin in hereditary elliptocytosis.

Authors:  S L Marchesi; W J Knowles; J S Morrow; M Bologna; V T Marchesi
Journal:  Blood       Date:  1986-01       Impact factor: 22.113

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  9 in total

Review 1.  Probing structures of large protein complexes using zero-length cross-linking.

Authors:  Roland F Rivera-Santiago; Sira Sriswasdi; Sandra L Harper; David W Speicher
Journal:  Methods       Date:  2015-05-01       Impact factor: 3.608

2.  Full-Length Anion Exchanger 1 Structure and Interactions with Ankyrin-1 Determined by Zero Length Crosslinking of Erythrocyte Membranes.

Authors:  Roland Rivera-Santiago; Sandra L Harper; Sira Sriswasdi; Peter Hembach; David W Speicher
Journal:  Structure       Date:  2016-12-15       Impact factor: 5.006

3.  Solution structure of the reduced form of human peroxiredoxin-6 elucidated using zero-length chemical cross-linking and homology modelling.

Authors:  Roland F Rivera-Santiago; Sandra L Harper; Suiping Zhou; Sira Sriswasdi; Sheldon I Feinstein; Aron B Fisher; David W Speicher
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Review 4.  The Spectrinome: The Interactome of a Scaffold Protein Creating Nuclear and Cytoplasmic Connectivity and Function.

Authors:  Steven R Goodman; Daniel Johnson; Steven L Youngentob; David Kakhniashvili
Journal:  Exp Biol Med (Maywood)       Date:  2019-09-04

5.  Aberrant splicing contributes to severe α-spectrin-linked congenital hemolytic anemia.

Authors:  Patrick G Gallagher; Yelena Maksimova; Kimberly Lezon-Geyda; Peter E Newburger; Desiree Medeiros; Robin D Hanson; Jennifer Rothman; Sara Israels; Donna A Wall; Robert F Sidonio; Colin Sieff; L Kate Gowans; Nupur Mittal; Roland Rivera-Santiago; David W Speicher; Susan J Baserga; Vincent P Schulz
Journal:  J Clin Invest       Date:  2019-04-30       Impact factor: 14.808

6.  The Physiological Molecular Shape of Spectrin: A Compact Supercoil Resembling a Chinese Finger Trap.

Authors:  Jeffrey W Brown; Esther Bullitt; Sira Sriswasdi; Sandra Harper; David W Speicher; C James McKnight
Journal:  PLoS Comput Biol       Date:  2015-06-11       Impact factor: 4.475

7.  Probing conformational stability and dynamics of erythroid and nonerythroid spectrin: effects of urea and guanidine hydrochloride.

Authors:  Malay Patra; Chaitali Mukhopadhyay; Abhijit Chakrabarti
Journal:  PLoS One       Date:  2015-01-24       Impact factor: 3.240

8.  Computational Modelling of NF-κB Activation by IL-1RI and Its Co-Receptor TILRR, Predicts a Role for Cytoskeletal Sequestration of IκBα in Inflammatory Signalling.

Authors:  David M Rhodes; Sarah A Smith; Mike Holcombe; Eva E Qwarnstrom
Journal:  PLoS One       Date:  2015-06-25       Impact factor: 3.240

9.  Two different pathogenic gene mutations coexisted in the same hereditary spherocytosis family manifested with heterogeneous phenotypes.

Authors:  Hongwei Shen; Hui Huang; Kaizhong Luo; Yan Yi; Xiaoliu Shi
Journal:  BMC Med Genet       Date:  2019-05-24       Impact factor: 2.103

  9 in total

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