Literature DB >> 24448659

Expression of microRNAs and their targets regulates floral development in tobacco (Nicotiana tabacum).

Caitlin E Burklew1, Fuliang Xie, Jordan Ashlock, Baohong Zhang.   

Abstract

MicroRNAs (miRNAs) are an extensive class of endogenous posttranscriptional gene regulators that function to mediate gene expression by cleaving target mRNAs or by preventing protein translation. Because of their importance in mediating gene regulation, identifying and elucidating the function of miRNAs have been the primary focus of many researchers. Now that many miRNAs have been identified and assessed for their functionality, the next step is to create expression profiles for miRNAs, so that gene expression studies can be further enhanced with knowledge of the basal expression levels of miRNAs and their targets. In a previous study, 259 putative miRNAs were identified in tobacco, in which 11 of them were confirmed. The primary goal of this study was to further expand on that study and create an expression profile for nine miRNAs and their targets in a tissue-specific manner in tobacco. We chose to study miRNAs that largely play a role in floral development and nutrient stress response. The results of our study show that all tested miRNAs and their targets were expressed in a differential manner. The results of our study also show that out of the tested miRNAs and their targets, miR159, miR157, miR167, miR172, and superoxide dismutase were expressed the highest, suggesting that these genes may play a vital role in the growth and development of tobacco. Corrected expression of miRNAs and their targets regulates floral development.

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Year:  2014        PMID: 24448659     DOI: 10.1007/s10142-014-0359-2

Source DB:  PubMed          Journal:  Funct Integr Genomics        ISSN: 1438-793X            Impact factor:   3.410


  34 in total

1.  Conservation and divergence of plant microRNA genes.

Authors:  Baohong Zhang; Xiaoping Pan; Charles H Cannon; George P Cobb; Todd A Anderson
Journal:  Plant J       Date:  2006-04       Impact factor: 6.417

Review 2.  MicroRNAs and their regulatory roles in animals and plants.

Authors:  Baohong Zhang; Qinglian Wang; Xiaoping Pan
Journal:  J Cell Physiol       Date:  2007-02       Impact factor: 6.384

3.  Cleavage of a non-conserved target by a specific miR156 isoform in root apexes of Medicago truncatula.

Authors:  Loreto Naya; Ghazantar Abbas Khan; Céline Sorin; Caroline Hartmann; Martin Crespi; Christine Lelandais-Brière
Journal:  Plant Signal Behav       Date:  2010-03-12

4.  Temporal regulation of shoot development in Arabidopsis thaliana by miR156 and its target SPL3.

Authors:  Gang Wu; R Scott Poethig
Journal:  Development       Date:  2006-08-16       Impact factor: 6.868

Review 5.  Role of miRNAs and siRNAs in biotic and abiotic stress responses of plants.

Authors:  Basel Khraiwesh; Jian-Kang Zhu; Jianhua Zhu
Journal:  Biochim Biophys Acta       Date:  2011-05-13

6.  Identification and characterization of microRNAs and their target genes in tobacco (Nicotiana tabacum).

Authors:  Taylor P Frazier; Fuliang Xie; Andrew Freistaedter; Caitlin E Burklew; Baohong Zhang
Journal:  Planta       Date:  2010-08-29       Impact factor: 4.116

7.  High-throughput deep sequencing shows that microRNAs play important roles in switchgrass responses to drought and salinity stress.

Authors:  Fuliang Xie; Charles Neal Stewart; Faten A Taki; Qiuling He; Huawei Liu; Baohong Zhang
Journal:  Plant Biotechnol J       Date:  2013-11-28       Impact factor: 9.803

8.  The sequential action of miR156 and miR172 regulates developmental timing in Arabidopsis.

Authors:  Gang Wu; Mee Yeon Park; Susan R Conway; Jia-Wei Wang; Detlef Weigel; R Scott Poethig
Journal:  Cell       Date:  2009-08-21       Impact factor: 41.582

9.  Titanium dioxide nanoparticles affect the growth and microRNA expression of tobacco (Nicotiana tabacum).

Authors:  Taylor P Frazier; Caitlin E Burklew; Baohong Zhang
Journal:  Funct Integr Genomics       Date:  2013-10-15       Impact factor: 3.410

10.  Regulation of phosphate homeostasis by MicroRNA in Arabidopsis.

Authors:  Tzyy-Jen Chiou; Kyaw Aung; Shu-I Lin; Chia-Chune Wu; Su-Fen Chiang; Chun-Lin Su
Journal:  Plant Cell       Date:  2005-12-30       Impact factor: 11.277

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  3 in total

1.  A characterization of grapevine of GRAS domain transcription factor gene family.

Authors:  Xin Sun; Zhengqiang Xie; Cheng Zhang; Qian Mu; Weimin Wu; Baoju Wang; Jinggui Fang
Journal:  Funct Integr Genomics       Date:  2016-02-03       Impact factor: 3.410

2.  In Silico Analysis of Small RNAs Suggest Roles for Novel and Conserved miRNAs in the Formation of Epigenetic Memory in Somatic Embryos of Norway Spruce.

Authors:  Igor A Yakovlev; Carl G Fossdal
Journal:  Front Physiol       Date:  2017-09-08       Impact factor: 4.566

3.  MicroRNA expression profiles during cotton (Gossypium hirsutum L) fiber early development.

Authors:  Min Wang; Runrun Sun; Chao Li; Qinglian Wang; Baohong Zhang
Journal:  Sci Rep       Date:  2017-03-22       Impact factor: 4.379

  3 in total

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